RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 RPS18P62269 152 aaKnown RBP15.48■□□□□ 0.07
TSPAN4-208ENST00000409531 BTG2P78543 158 aa15.48■□□□□ 0.07
TSPAN4-208ENST00000409531 RHAGQ02094 409 aa15.48■□□□□ 0.07
TSPAN4-208ENST00000409531 LRRC74AQ0VAA2 488 aa15.48■□□□□ 0.07
TSPAN4-208ENST00000409531 KLF10Q13118 480 aa15.48■□□□□ 0.07
TSPAN4-208ENST00000409531 UBAP2LQ14157 1087 aaKnown RBP15.48■□□□□ 0.07
TSPAN4-208ENST00000409531 RCAN2Q14206 197 aa15.48■□□□□ 0.07
TSPAN4-208ENST00000409531 FAM174BQ3ZCQ3 159 aa15.48■□□□□ 0.07
TSPAN4-208ENST00000409531 ANXA8L1Q5VT79 327 aa15.48■□□□□ 0.07
TSPAN4-208ENST00000409531 SHISA5Q8N114 240 aa15.48■□□□□ 0.07
TSPAN4-208ENST00000409531 OR9I1Q8NGQ6 314 aa15.48■□□□□ 0.07
TSPAN4-208ENST00000409531 ANKRD9Q96BM1 317 aaPredicted RBP15.48■□□□□ 0.07
TSPAN4-208ENST00000409531 ZBED6CLQ96FA7 236 aaPredicted RBP15.48■□□□□ 0.07
TSPAN4-208ENST00000409531 BBS4Q96RK4 519 aa15.48■□□□□ 0.07
TSPAN4-208ENST00000409531 DUSP26Q9BV47 211 aa15.48■□□□□ 0.07
TSPAN4-208ENST00000409531 SEMA3GQ9NS98 782 aa15.48■□□□□ 0.07
TSPAN4-208ENST00000409531 C5AR2Q9P296 337 aa15.48■□□□□ 0.07
TSPAN4-208ENST00000409531 C19orf25Q9UFG5 118 aaPredicted RBP15.48■□□□□ 0.07
TSPAN4-208ENST00000409531 TCFL5Q9UL49 500 aa15.48■□□□□ 0.07
TSPAN4-208ENST00000409531 SMG1Q96Q15 3661 aaKnown RBP15.48■□□□□ 0.07
TSPAN4-208ENST00000409531 NUP214P35658 2090 aaPredicted RBP15.48■□□□□ 0.07
TSPAN4-208ENST00000409531 ATMQ13315 3056 aa15.48■□□□□ 0.07
TSPAN4-208ENST00000409531 EIF4E1BA6NMX2 242 aaKnown RBP15.47■□□□□ 0.07
TSPAN4-208ENST00000409531 CFLARO15519 480 aa15.47■□□□□ 0.07
TSPAN4-208ENST00000409531 ALOX12BO75342 701 aa15.47■□□□□ 0.07
TSPAN4-208ENST00000409531 PGRP06401 933 aa15.47■□□□□ 0.07
TSPAN4-208ENST00000409531 LAMP1P11279 417 aa15.47■□□□□ 0.07
TSPAN4-208ENST00000409531 PORP16435 677 aaPredicted RBP15.47■□□□□ 0.07
TSPAN4-208ENST00000409531 MAOAP21397 527 aa15.47■□□□□ 0.07
TSPAN4-208ENST00000409531 XKP51811 444 aa15.47■□□□□ 0.07
TSPAN4-208ENST00000409531 IGLV3-21P80748 117 aaPredicted RBP15.47■□□□□ 0.07
TSPAN4-208ENST00000409531 PLIN5Q00G26 463 aa15.47■□□□□ 0.07
TSPAN4-208ENST00000409531 NSDHLQ15738 373 aa15.47■□□□□ 0.07
TSPAN4-208ENST00000409531 CEBPEQ15744 281 aa15.47■□□□□ 0.07
TSPAN4-208ENST00000409531 DEFB109BQ30KR1 87 aa15.47■□□□□ 0.07
TSPAN4-208ENST00000409531 SPANXN4Q5MJ08 99 aa15.47■□□□□ 0.07
TSPAN4-208ENST00000409531 ATP1A1-AS1Q5TC04 95 aa15.47■□□□□ 0.07
TSPAN4-208ENST00000409531 ANKRD26P1Q6NSI1 321 aa15.47■□□□□ 0.07
TSPAN4-208ENST00000409531 BLOC1S3Q6QNY0 202 aa15.47■□□□□ 0.07
TSPAN4-208ENST00000409531 SHISA6Q6ZSJ9 500 aa15.47■□□□□ 0.07
TSPAN4-208ENST00000409531 MSANTD1Q6ZTZ1 278 aa15.47■□□□□ 0.07
TSPAN4-208ENST00000409531 LAPTM4BQ86VI4 370 aa15.47■□□□□ 0.07
TSPAN4-208ENST00000409531 LRRC25Q8N386 305 aaPredicted RBP15.47■□□□□ 0.07
TSPAN4-208ENST00000409531 ZFP28Q8NHY6 868 aa15.47■□□□□ 0.07
TSPAN4-208ENST00000409531 UCN3Q969E3 161 aa15.47■□□□□ 0.07
TSPAN4-208ENST00000409531 NACC2Q96BF6 587 aa15.47■□□□□ 0.07
TSPAN4-208ENST00000409531 CNRIP1Q96F85 164 aaPredicted RBP15.47■□□□□ 0.07
TSPAN4-208ENST00000409531 CCDC106Q9BWC9 280 aa15.47■□□□□ 0.07
TSPAN4-208ENST00000409531 ALOXE3Q9BYJ1 711 aa15.47■□□□□ 0.07
TSPAN4-208ENST00000409531 ACSS1Q9NUB1 689 aaPredicted RBP15.47■□□□□ 0.07
TSPAN4-208ENST00000409531 FAM120CQ9NX05 1096 aaKnown RBP15.47■□□□□ 0.07
TSPAN4-208ENST00000409531 ARMCX1Q9P291 453 aa15.47■□□□□ 0.07
TSPAN4-208ENST00000409531 POLHQ9Y253 713 aa15.47■□□□□ 0.07
TSPAN4-208ENST00000409531 IGKV3D-11A0A0A0MRZ8 115 aa15.46■□□□□ 0.07
TSPAN4-208ENST00000409531 CDC14CA4D256 554 aa15.46■□□□□ 0.07
TSPAN4-208ENST00000409531 CCDC154A6NI56 674 aa15.46■□□□□ 0.07
TSPAN4-208ENST00000409531 MYO1GB0I1T2 1018 aa15.46■□□□□ 0.07
TSPAN4-208ENST00000409531 NR5A2O00482 541 aa15.46■□□□□ 0.07
TSPAN4-208ENST00000409531 RNASET2O00584 256 aaKnown RBP15.46■□□□□ 0.07
TSPAN4-208ENST00000409531 SNRPB2P08579 225 aaKnown RBP15.46■□□□□ 0.07
TSPAN4-208ENST00000409531 SLC35E2P0CK97 266 aa15.46■□□□□ 0.07
TSPAN4-208ENST00000409531 C8orf89P0DMQ9 161 aa15.46■□□□□ 0.07
TSPAN4-208ENST00000409531 SFTPCP11686 197 aa15.46■□□□□ 0.07
TSPAN4-208ENST00000409531 CPMP14384 443 aa15.46■□□□□ 0.07
TSPAN4-208ENST00000409531 LY6DQ14210 128 aa15.46■□□□□ 0.07
TSPAN4-208ENST00000409531 SSPNQ14714 243 aa15.46■□□□□ 0.07
TSPAN4-208ENST00000409531 ZNF385BQ569K4 471 aa15.46■□□□□ 0.07
TSPAN4-208ENST00000409531 FAM91A1Q658Y4 838 aa15.46■□□□□ 0.07
TSPAN4-208ENST00000409531 FUNDC1Q8IVP5 155 aa15.46■□□□□ 0.07
TSPAN4-208ENST00000409531 OR4N5Q8IXE1 308 aa15.46■□□□□ 0.07
TSPAN4-208ENST00000409531 ST13P4Q8IZP2 240 aaPredicted RBP15.46■□□□□ 0.07
TSPAN4-208ENST00000409531 EXD3Q8N9H8 876 aa15.46■□□□□ 0.07
TSPAN4-208ENST00000409531 APOBEC4Q8WW27 367 aaKnown RBP15.46■□□□□ 0.07
TSPAN4-208ENST00000409531 THAP4Q8WY91 577 aa15.46■□□□□ 0.07
TSPAN4-208ENST00000409531 ERP27Q96DN0 273 aa15.46■□□□□ 0.07
TSPAN4-208ENST00000409531 SPDL1Q96EA4 605 aa15.46■□□□□ 0.07
TSPAN4-208ENST00000409531 RBM18Q96H35 190 aaKnown RBP15.46■□□□□ 0.07
TSPAN4-208ENST00000409531 VPS50Q96JG6 964 aa15.46■□□□□ 0.07
TSPAN4-208ENST00000409531 ZNF681Q96N22 645 aa15.46■□□□□ 0.07
TSPAN4-208ENST00000409531 DGAT2Q96PD7 388 aa15.46■□□□□ 0.07
TSPAN4-208ENST00000409531 OR52E6Q96RD3 313 aa15.46■□□□□ 0.07
TSPAN4-208ENST00000409531 SLC25A23Q9BV35 468 aa15.46■□□□□ 0.07
TSPAN4-208ENST00000409531 RMND5AQ9H871 391 aa15.46■□□□□ 0.07
TSPAN4-208ENST00000409531 NECTIN3Q9NQS3 549 aa15.46■□□□□ 0.07
TSPAN4-208ENST00000409531 FLNBO75369 2602 aaKnown RBP15.46■□□□□ 0.07
TSPAN4-208ENST00000409531 PIEZO2Q9H5I5 2752 aa15.46■□□□□ 0.07
TSPAN4-208ENST00000409531 PRSS51A0A1B0GVH4 220 aa15.45■□□□□ 0.06
TSPAN4-208ENST00000409531 TCRBV16S1A1N1A0A5B0 115 aa15.45■□□□□ 0.06
TSPAN4-208ENST00000409531 WASHC1A8K0Z3 465 aa15.45■□□□□ 0.06
TSPAN4-208ENST00000409531 C9JVG2 144 aa15.45■□□□□ 0.06
TSPAN4-208ENST00000409531 DYRK3O43781 588 aa15.45■□□□□ 0.06
TSPAN4-208ENST00000409531 OR10H2O60403 315 aa15.45■□□□□ 0.06
TSPAN4-208ENST00000409531 IFNA16P05015 189 aa15.45■□□□□ 0.06
TSPAN4-208ENST00000409531 GALNSP34059 522 aa15.45■□□□□ 0.06
TSPAN4-208ENST00000409531 FEN1P39748 380 aaKnown RBP15.45■□□□□ 0.06
TSPAN4-208ENST00000409531 FRKP42685 505 aaPredicted RBP15.45■□□□□ 0.06
TSPAN4-208ENST00000409531 STT3AP46977 705 aa15.45■□□□□ 0.06
TSPAN4-208ENST00000409531 ZFP36L2P47974 494 aaKnown RBP15.45■□□□□ 0.06
TSPAN4-208ENST00000409531 MANFP55145 182 aaKnown RBP15.45■□□□□ 0.06
TSPAN4-208ENST00000409531 ID2Q02363 134 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms