RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 UTS2RQ9UKP6 389 aa18.48■□□□□ 0.55
PDLIM2-207ENST00000409417 A0A1W2PS29 197 aa18.47■□□□□ 0.55
PDLIM2-207ENST00000409417 MAN1A2O60476 641 aa18.47■□□□□ 0.55
PDLIM2-207ENST00000409417 SKAP2O75563 359 aaPredicted RBP18.47■□□□□ 0.55
PDLIM2-207ENST00000409417 ERAL1O75616 437 aaKnown RBP18.47■□□□□ 0.55
PDLIM2-207ENST00000409417 ZFAND5O76080 213 aa18.47■□□□□ 0.55
PDLIM2-207ENST00000409417 IGKV3-11P04433 115 aa18.47■□□□□ 0.55
PDLIM2-207ENST00000409417 CSNK2A2P19784 350 aaPredicted RBP18.47■□□□□ 0.55
PDLIM2-207ENST00000409417 DDCP20711 480 aa18.47■□□□□ 0.55
PDLIM2-207ENST00000409417 TLR1Q15399 786 aa18.47■□□□□ 0.55
PDLIM2-207ENST00000409417 SPRED3Q2MJR0 410 aa18.47■□□□□ 0.55
PDLIM2-207ENST00000409417 GALNTL6Q49A17 601 aa18.47■□□□□ 0.55
PDLIM2-207ENST00000409417 ATG16L1Q676U5 607 aa18.47■□□□□ 0.55
PDLIM2-207ENST00000409417 HSDL2Q6YN16 418 aa18.47■□□□□ 0.55
PDLIM2-207ENST00000409417 IKBIPQ70UQ0 350 aa18.47■□□□□ 0.55
PDLIM2-207ENST00000409417 BEST3Q8N1M1 668 aa18.47■□□□□ 0.55
PDLIM2-207ENST00000409417 OR8K3Q8NH51 312 aa18.47■□□□□ 0.55
PDLIM2-207ENST00000409417 C19orf60Q96EN9 201 aa18.47■□□□□ 0.55
PDLIM2-207ENST00000409417 ART5Q96L15 291 aa18.47■□□□□ 0.55
PDLIM2-207ENST00000409417 C3orf30Q96M34 536 aa18.47■□□□□ 0.55
PDLIM2-207ENST00000409417 CDCP1Q9H5V8 836 aa18.47■□□□□ 0.55
PDLIM2-207ENST00000409417 MANSC1Q9H8J5 431 aa18.47■□□□□ 0.55
PDLIM2-207ENST00000409417 CXorf21Q9HAI6 301 aa18.47■□□□□ 0.55
PDLIM2-207ENST00000409417 ABI3Q9P2A4 366 aa18.47■□□□□ 0.55
PDLIM2-207ENST00000409417 COPS7AQ9UBW8 275 aa18.47■□□□□ 0.55
PDLIM2-207ENST00000409417 CSAG2Q9Y5P2 127 aa18.47■□□□□ 0.55
PDLIM2-207ENST00000409417 NBASA2RRP1 2371 aa18.47■□□□□ 0.55
PDLIM2-207ENST00000409417 RP1L1Q8IWN7 2480 aaPredicted RBP18.47■□□□□ 0.55
PDLIM2-207ENST00000409417 CDK2AP1O14519 115 aa18.46■□□□□ 0.55
PDLIM2-207ENST00000409417 SNNO75324 88 aaPredicted RBP18.46■□□□□ 0.55
PDLIM2-207ENST00000409417 MLF1P58340 268 aa18.46■□□□□ 0.55
PDLIM2-207ENST00000409417 RPL38P63173 70 aaKnown RBP18.46■□□□□ 0.55
PDLIM2-207ENST00000409417 ZNF750Q32MQ0 723 aa18.46■□□□□ 0.55
PDLIM2-207ENST00000409417 PLEKHN1Q494U1 663 aaPredicted RBP18.46■□□□□ 0.55
PDLIM2-207ENST00000409417 ATP6AP1LQ52LC2 224 aa18.46■□□□□ 0.55
PDLIM2-207ENST00000409417 COLEC12Q5KU26 742 aa18.46■□□□□ 0.55
PDLIM2-207ENST00000409417 FAM71E1Q6IPT2 247 aa18.46■□□□□ 0.55
PDLIM2-207ENST00000409417 PRICKLE2Q7Z3G6 844 aa18.46■□□□□ 0.55
PDLIM2-207ENST00000409417 GALNT12Q8IXK2 581 aa18.46■□□□□ 0.55
PDLIM2-207ENST00000409417 SAMD14Q8IZD0 417 aaPredicted RBP18.46■□□□□ 0.55
PDLIM2-207ENST00000409417 ZNF321PQ8N8H1 164 aa18.46■□□□□ 0.55
PDLIM2-207ENST00000409417 CNRIP1Q96F85 164 aaPredicted RBP18.46■□□□□ 0.55
PDLIM2-207ENST00000409417 ZNF681Q96N22 645 aa18.46■□□□□ 0.55
PDLIM2-207ENST00000409417 ZNF446Q9NWS9 450 aa18.46■□□□□ 0.55
PDLIM2-207ENST00000409417 ZNF780BQ9Y6R6 833 aa18.46■□□□□ 0.55
PDLIM2-207ENST00000409417 UQCRHLA0A096LP55 91 aa18.46■□□□□ 0.54
PDLIM2-207ENST00000409417 ATP6AP2A0A1C7CYW4 349 aa18.46■□□□□ 0.54
PDLIM2-207ENST00000409417 HRKO00198 91 aa18.46■□□□□ 0.54
PDLIM2-207ENST00000409417 ATP6AP2O75787 350 aa18.46■□□□□ 0.54
PDLIM2-207ENST00000409417 SORBS2O94875 1100 aaKnown RBP18.46■□□□□ 0.54
PDLIM2-207ENST00000409417 ATP1B1P05026 303 aa18.46■□□□□ 0.54
PDLIM2-207ENST00000409417 TACR1P25103 407 aa18.46■□□□□ 0.54
PDLIM2-207ENST00000409417 FEN1P39748 380 aaKnown RBP18.46■□□□□ 0.54
PDLIM2-207ENST00000409417 TNFSF10P50591 281 aa18.46■□□□□ 0.54
PDLIM2-207ENST00000409417 C2orf80Q0P641 193 aa18.46■□□□□ 0.54
PDLIM2-207ENST00000409417 ZNF267Q14586 743 aaPredicted RBP18.46■□□□□ 0.54
PDLIM2-207ENST00000409417 ZNF605Q86T29 641 aa18.46■□□□□ 0.54
PDLIM2-207ENST00000409417 CDC26Q8NHZ8 85 aa18.46■□□□□ 0.54
PDLIM2-207ENST00000409417 THAP3Q8WTV1 239 aaPredicted RBP18.46■□□□□ 0.54
PDLIM2-207ENST00000409417 CNPPD1Q9BV87 410 aa18.46■□□□□ 0.54
PDLIM2-207ENST00000409417 ACBD3Q9H3P7 528 aa18.46■□□□□ 0.54
PDLIM2-207ENST00000409417 SLAMF7Q9NQ25 335 aa18.46■□□□□ 0.54
PDLIM2-207ENST00000409417 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.46■□□□□ 0.54
PDLIM2-207ENST00000409417 TAS2R7Q9NYW3 318 aa18.46■□□□□ 0.54
PDLIM2-207ENST00000409417 FASNP49327 2511 aaKnown RBP18.45■□□□□ 0.54
PDLIM2-207ENST00000409417 OR5H15A6NDH6 313 aa18.45■□□□□ 0.54
PDLIM2-207ENST00000409417 GABRR3A8MPY1 467 aa18.45■□□□□ 0.54
PDLIM2-207ENST00000409417 KLF11O14901 512 aa18.45■□□□□ 0.54
PDLIM2-207ENST00000409417 PRKNO60260 465 aaPredicted RBP18.45■□□□□ 0.54
PDLIM2-207ENST00000409417 PEX11AO75192 247 aa18.45■□□□□ 0.54
PDLIM2-207ENST00000409417 JUNP05412 331 aaKnown RBP18.45■□□□□ 0.54
PDLIM2-207ENST00000409417 ERVK-8P63133 956 aa18.45■□□□□ 0.54
PDLIM2-207ENST00000409417 PDCD2Q16342 344 aaPredicted RBP18.45■□□□□ 0.54
PDLIM2-207ENST00000409417 C6orf136Q5SQH8 315 aa18.45■□□□□ 0.54
PDLIM2-207ENST00000409417 LRRC25Q8N386 305 aaPredicted RBP18.45■□□□□ 0.54
PDLIM2-207ENST00000409417 Q8NA96 180 aa18.45■□□□□ 0.54
PDLIM2-207ENST00000409417 CATSPER1Q8NEC5 780 aa18.45■□□□□ 0.54
PDLIM2-207ENST00000409417 OR5L2Q8NGL0 311 aa18.45■□□□□ 0.54
PDLIM2-207ENST00000409417 EXOSC8Q96B26 276 aaKnown RBP18.45■□□□□ 0.54
PDLIM2-207ENST00000409417 TUBGCP3Q96CW5 907 aa18.45■□□□□ 0.54
PDLIM2-207ENST00000409417 EGLN2Q96KS0 407 aa18.45■□□□□ 0.54
PDLIM2-207ENST00000409417 UTP23Q9BRU9 249 aaKnown RBP18.45■□□□□ 0.54
PDLIM2-207ENST00000409417 MIEF1Q9NQG6 463 aa18.45■□□□□ 0.54
PDLIM2-207ENST00000409417 SLC35C2Q9NQQ7 365 aa18.45■□□□□ 0.54
PDLIM2-207ENST00000409417 GIMAP4Q9NUV9 329 aa18.45■□□□□ 0.54
PDLIM2-207ENST00000409417 ERVK-19Q9WJR5 959 aa18.45■□□□□ 0.54
PDLIM2-207ENST00000409417 TRAV17A0A0B4J275 112 aa18.44■□□□□ 0.54
PDLIM2-207ENST00000409417 TMEM200CA6NKL6 621 aa18.44■□□□□ 0.54
PDLIM2-207ENST00000409417 FCHO1O14526 889 aa18.44■□□□□ 0.54
PDLIM2-207ENST00000409417 SLC28A2O43868 658 aa18.44■□□□□ 0.54
PDLIM2-207ENST00000409417 F10P00742 488 aa18.44■□□□□ 0.54
PDLIM2-207ENST00000409417 BCKDHAP12694 445 aa18.44■□□□□ 0.54
PDLIM2-207ENST00000409417 SDC1P18827 310 aa18.44■□□□□ 0.54
PDLIM2-207ENST00000409417 MAPK1P28482 360 aa18.44■□□□□ 0.54
PDLIM2-207ENST00000409417 HK2P52789 917 aa18.44■□□□□ 0.54
PDLIM2-207ENST00000409417 RNF4P78317 190 aa18.44■□□□□ 0.54
PDLIM2-207ENST00000409417 FUT7Q11130 342 aa18.44■□□□□ 0.54
PDLIM2-207ENST00000409417 TUBA3CQ13748 450 aa18.44■□□□□ 0.54
PDLIM2-207ENST00000409417 ZNF169Q14929 603 aaPredicted RBP18.44■□□□□ 0.54
PDLIM2-207ENST00000409417 FAM180BQ6P0A1 224 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms