RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 SPPL3Q8TCT6 385 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 RLN3Q8WXF3 142 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 BEX2Q9BXY8 128 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 GABARAPL1Q9H0R8 117 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 ZNF282Q9UDV7 671 aaPredicted RBP12.72□□□□□ -0.37
COL6A2-204ENST00000409416 LRRC72A6NJI9 287 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 ZW10O43264 779 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 SVILO95425 2214 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 C1orf105O95561 183 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 IFNW1P05000 195 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 CDK1P06493 297 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 NPPBP16860 134 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 SLC7A9P82251 487 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 MRPS15P82914 257 aaKnown RBP12.72□□□□□ -0.37
COL6A2-204ENST00000409416 MTAPQ13126 283 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 TEAD4Q15561 434 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 CCBE1Q6UXH8 406 aaPredicted RBP12.72□□□□□ -0.37
COL6A2-204ENST00000409416 KRT78Q8N1N4 520 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 DEPDC4Q8N2C3 294 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 MMP27Q9H306 513 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 WDR26Q9H7D7 661 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 A0A1W2PPK0 400 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 EFCAB10A6NFE3 127 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 CLDN24A6NM45 220 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 ANHXE9PGG2 379 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 H3BQ06 376 aaPredicted RBP12.72□□□□□ -0.37
COL6A2-204ENST00000409416 GFYI3L273 518 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 KAT7O95251 611 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 SSTR4P31391 388 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 CAV3P56539 151 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 DEFA1P59665 94 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 DEFA3P59666 94 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 RAE1P78406 368 aaKnown RBP12.72□□□□□ -0.37
COL6A2-204ENST00000409416 BTN3A2P78410 334 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 PTGES3Q15185 160 aaKnown RBP12.72□□□□□ -0.37
COL6A2-204ENST00000409416 CCDC157Q569K6 752 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 TJAP1Q5JTD0 557 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 AGAP7PQ5VUJ5 663 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 FAHD1Q6P587 224 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 FAM92BQ6ZTR7 304 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 SHISA5Q8N114 240 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 C16orf58Q96GQ5 468 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 MGLLQ99685 303 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 DPH7Q9BTV6 452 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 DPEP2Q9H4A9 486 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 FBXO8Q9NRD0 319 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 CLN6Q9NWW5 311 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 OSGIN1Q9UJX0 560 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 POFUT2Q9Y2G5 429 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 PCDHGB1Q9Y5G3 927 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 REV3LO60673 3130 aa12.72□□□□□ -0.37
COL6A2-204ENST00000409416 PRMT3O60678 531 aa12.71□□□□□ -0.37
COL6A2-204ENST00000409416 CCNKO75909 580 aa12.71□□□□□ -0.37
COL6A2-204ENST00000409416 MPC1LP0DKB6 136 aa12.71□□□□□ -0.37
COL6A2-204ENST00000409416 POLR2CP19387 275 aaPredicted RBP12.71□□□□□ -0.37
COL6A2-204ENST00000409416 DSTNP60981 165 aa12.71□□□□□ -0.37
COL6A2-204ENST00000409416 VEZF1Q14119 521 aa12.71□□□□□ -0.37
COL6A2-204ENST00000409416 PPP2R2DQ66LE6 453 aa12.71□□□□□ -0.37
COL6A2-204ENST00000409416 CYP4Z2PQ8N1L4 340 aa12.71□□□□□ -0.37
COL6A2-204ENST00000409416 WDR20Q8TBZ3 569 aa12.71□□□□□ -0.37
COL6A2-204ENST00000409416 STARD8Q92502 1023 aa12.71□□□□□ -0.37
COL6A2-204ENST00000409416 TMEM19Q96HH6 336 aa12.71□□□□□ -0.37
COL6A2-204ENST00000409416 EPYCQ99645 322 aa12.71□□□□□ -0.37
COL6A2-204ENST00000409416 REEP4Q9H6H4 257 aa12.71□□□□□ -0.37
COL6A2-204ENST00000409416 TBC1D17Q9HA65 648 aa12.71□□□□□ -0.37
COL6A2-204ENST00000409416 CNIH4Q9P003 139 aa12.71□□□□□ -0.37
COL6A2-204ENST00000409416 ATP6V1HQ9UI12 483 aa12.71□□□□□ -0.37
COL6A2-204ENST00000409416 CORO2BQ9UQ03 480 aa12.71□□□□□ -0.37
COL6A2-204ENST00000409416 IFT52Q9Y366 437 aa12.71□□□□□ -0.37
COL6A2-204ENST00000409416 NOX1Q9Y5S8 564 aa12.71□□□□□ -0.37
COL6A2-204ENST00000409416 A0A1W2PQU0 124 aa12.71□□□□□ -0.37
COL6A2-204ENST00000409416 C1QTNF3-AMACRE9PGA6 284 aa12.71□□□□□ -0.37
COL6A2-204ENST00000409416 ACADMP11310 421 aa12.71□□□□□ -0.37
COL6A2-204ENST00000409416 ANXA8P13928 327 aa12.71□□□□□ -0.37
COL6A2-204ENST00000409416 PPIBP23284 216 aaKnown RBP12.71□□□□□ -0.37
COL6A2-204ENST00000409416 RGS6P49758 472 aa12.71□□□□□ -0.37
COL6A2-204ENST00000409416 SELENBP1Q13228 472 aa12.71□□□□□ -0.37
COL6A2-204ENST00000409416 ARMC4Q5T2S8 1044 aa12.71□□□□□ -0.37
COL6A2-204ENST00000409416 DDI2Q5TDH0 399 aa12.71□□□□□ -0.37
COL6A2-204ENST00000409416 ERN2Q76MJ5 926 aaKnown RBP12.71□□□□□ -0.37
COL6A2-204ENST00000409416 SMAP2Q8WU79 429 aaPredicted RBP12.71□□□□□ -0.37
COL6A2-204ENST00000409416 RAD9AQ99638 391 aa12.71□□□□□ -0.37
COL6A2-204ENST00000409416 FNDC11Q9BVV2 318 aa12.71□□□□□ -0.37
COL6A2-204ENST00000409416 KLHL31Q9H511 634 aa12.71□□□□□ -0.37
COL6A2-204ENST00000409416 ZNF226Q9NYT6 803 aa12.71□□□□□ -0.37
COL6A2-204ENST00000409416 MRPS7Q9Y2R9 242 aaKnown RBP12.71□□□□□ -0.37
COL6A2-204ENST00000409416 PLXNA4Q9HCM2 1894 aa12.71□□□□□ -0.38
COL6A2-204ENST00000409416 METTL15A6NJ78 407 aa12.71□□□□□ -0.38
COL6A2-204ENST00000409416 SLC9A3R1O14745 358 aaPredicted RBP12.71□□□□□ -0.38
COL6A2-204ENST00000409416 LINC01565O15544 149 aa12.71□□□□□ -0.38
COL6A2-204ENST00000409416 IL1RNP18510 177 aa12.71□□□□□ -0.38
COL6A2-204ENST00000409416 PCGF2P35227 344 aa12.71□□□□□ -0.38
COL6A2-204ENST00000409416 CCT3P49368 545 aaKnown RBP12.71□□□□□ -0.38
COL6A2-204ENST00000409416 SF3B4Q15427 424 aaKnown RBP eCLIP12.71□□□□□ -0.38
COL6A2-204ENST00000409416 LTB4RQ15722 352 aa12.71□□□□□ -0.38
COL6A2-204ENST00000409416 MICAQ29983 383 aa12.71□□□□□ -0.38
COL6A2-204ENST00000409416 GRHL2Q6ISB3 625 aa12.71□□□□□ -0.38
COL6A2-204ENST00000409416 PAQR6Q6TCH4 344 aa12.71□□□□□ -0.38
COL6A2-204ENST00000409416 C16orf62Q7Z3J2 963 aa12.71□□□□□ -0.38
COL6A2-204ENST00000409416 TRAM1L1Q8N609 369 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms