RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 NR5A2O00482 541 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 MEIS2O14770 477 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 CD3EAPO15446 510 aaKnown RBP5.2□□□□□ -1.58
CLK1-202ENST00000409403 GMDSO60547 372 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 VPS26AO75436 327 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 LYPLA2O95372 231 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 NDUFB10O96000 172 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 ANXA6P08133 673 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 SERPINF2P08697 491 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 HOXD4P09016 255 aaPredicted RBP5.2□□□□□ -1.58
CLK1-202ENST00000409403 FAM86B2P0C5J1 330 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 IFI30P13284 250 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 GATA3P23771 443 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 ALDH4A1P30038 563 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 MIPP30301 263 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 HLA-FP30511 346 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 MRPL19P49406 292 aaKnown RBP5.2□□□□□ -1.58
CLK1-202ENST00000409403 GSK3BP49841 420 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 DGKQP52824 942 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 HMGCS2P54868 508 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 ISL1P61371 349 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 IL5RAQ01344 420 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 ELP6Q0PNE2 266 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 KCNC3Q14003 757 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 AANATQ16613 207 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 PTCHD3Q3KNS1 767 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 SETMARQ53H47 684 aaPredicted RBP5.2□□□□□ -1.58
CLK1-202ENST00000409403 C2CD6Q53TS8 623 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 CERCAMQ5T4B2 595 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 CES5AQ6NT32 575 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 RETSATQ6NUM9 610 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 CNSTQ6PJW8 725 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 DBX2Q6ZNG2 339 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 DEFB128Q7Z7B8 93 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 C1orf210Q8IVY1 113 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 RIMKLAQ8IXN7 391 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 DCP1BQ8IZD4 617 aaKnown RBP5.2□□□□□ -1.58
CLK1-202ENST00000409403 DAW1Q8N136 415 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 PLD5Q8N7P1 536 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 ZMIZ2Q8NF64 920 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 OR5K1Q8NHB7 308 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 IL17DQ8TAD2 202 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 TRAPPC12Q8WVT3 735 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 MYDGFQ969H8 173 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 BIRC7Q96CA5 298 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 LRRC58Q96CX6 371 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 SGTBQ96EQ0 304 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 PPP1R36Q96LQ0 422 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 RNF145Q96MT1 663 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 WDFY2Q96P53 400 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 OR2A14Q96R47 310 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 MBOAT4Q96T53 435 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 ADAM2Q99965 735 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 LHX5Q9H2C1 402 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 SLC25A32Q9H2D1 315 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 DHX35Q9H5Z1 703 aaKnown RBP5.2□□□□□ -1.58
CLK1-202ENST00000409403 RANBP3Q9H6Z4 567 aaPredicted RBP5.2□□□□□ -1.58
CLK1-202ENST00000409403 ASAH2Q9NR71 780 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 UBQLN2Q9UHD9 624 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 CD207Q9UJ71 328 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 SERTAD3Q9UJW9 196 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 TBC1D24Q9ULP9 559 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 CA14Q9ULX7 337 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 TBX20Q9UMR3 447 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 STUB1Q9UNE7 303 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 ING4Q9UNL4 249 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 BAIAP2Q9UQB8 552 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 RNF6Q9Y252 685 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 HSPB11Q9Y547 144 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 FAM92AA1XBS5 289 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 ERI2A8K979 691 aaKnown RBP5.19□□□□□ -1.58
CLK1-202ENST00000409403 A8MV72 311 aaPredicted RBP5.19□□□□□ -1.58
CLK1-202ENST00000409403 GNGT2O14610 69 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 SLC30A4O14863 429 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 LINC01565O15544 149 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 CHMP2AO43633 222 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 GATCO43716 136 aaKnown RBP5.19□□□□□ -1.58
CLK1-202ENST00000409403 ORC5O43913 435 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 C1QL1O75973 258 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 WDR47O94967 919 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 SNAPINO95295 136 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 MT-ND2P03891 347 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 ITGA5P08648 1049 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 ADORA3P0DMS8 318 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 LAG3P18627 525 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 TNNI1P19237 187 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 EFNA1P20827 205 aaPredicted RBP5.19□□□□□ -1.58
CLK1-202ENST00000409403 GPX3P22352 226 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 SDC4P31431 198 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 TGFBR2P37173 567 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 MTHFRP42898 656 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 CCT3P49368 545 aaKnown RBP5.19□□□□□ -1.58
CLK1-202ENST00000409403 CENPAP49450 140 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 ACOT2P49753 483 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 ARHGDIAP52565 204 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 KCNK10P57789 538 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 FKBP1AP62942 108 aaKnown RBP5.19□□□□□ -1.58
CLK1-202ENST00000409403 LIPEQ05469 1076 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 POU5F1BQ06416 359 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 TCP10Q12799 353 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 196.5 ms