RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 CCT3P49368 545 aaKnown RBP7.92□□□□□ -1.14
SNX13-201ENST00000409076 COX10Q12887 443 aa7.92□□□□□ -1.14
SNX13-201ENST00000409076 GRIK2Q13002 908 aa7.92□□□□□ -1.14
SNX13-201ENST00000409076 ZNF544Q6NX49 715 aa7.92□□□□□ -1.14
SNX13-201ENST00000409076 C6orf120Q7Z4R8 191 aa7.92□□□□□ -1.14
SNX13-201ENST00000409076 PDZD3Q86UT5 571 aa7.92□□□□□ -1.14
SNX13-201ENST00000409076 ZNF761Q86XN6 746 aaPredicted RBP7.92□□□□□ -1.14
SNX13-201ENST00000409076 SERPINA12Q8IW75 414 aa7.92□□□□□ -1.14
SNX13-201ENST00000409076 OR8K3Q8NH51 312 aa7.92□□□□□ -1.14
SNX13-201ENST00000409076 IPCEF1Q8WWN9 437 aaPredicted RBP7.92□□□□□ -1.14
SNX13-201ENST00000409076 SCRN2Q96FV2 425 aa7.92□□□□□ -1.14
SNX13-201ENST00000409076 NELL2Q99435 816 aa7.92□□□□□ -1.14
SNX13-201ENST00000409076 SLC12A9Q9BXP2 914 aa7.92□□□□□ -1.14
SNX13-201ENST00000409076 CRNNQ9UBG3 495 aaPredicted RBP7.92□□□□□ -1.14
SNX13-201ENST00000409076 TMPRSS11EQ9UL52 423 aa7.92□□□□□ -1.14
SNX13-201ENST00000409076 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.92□□□□□ -1.14
SNX13-201ENST00000409076 ANKRD61A6NGH8 418 aa7.92□□□□□ -1.14
SNX13-201ENST00000409076 SOBPA7XYQ1 873 aa7.92□□□□□ -1.14
SNX13-201ENST00000409076 HAT1O14929 419 aa7.92□□□□□ -1.14
SNX13-201ENST00000409076 PRKYO43930 277 aa7.92□□□□□ -1.14
SNX13-201ENST00000409076 CSO75390 466 aaKnown RBP7.92□□□□□ -1.14
SNX13-201ENST00000409076 POP4O95707 220 aaKnown RBP7.92□□□□□ -1.14
SNX13-201ENST00000409076 GKN3PP0CG01 181 aa7.92□□□□□ -1.14
SNX13-201ENST00000409076 NRIP1P48552 1158 aa7.92□□□□□ -1.14
SNX13-201ENST00000409076 SRP9P49458 86 aaKnown RBP7.92□□□□□ -1.14
SNX13-201ENST00000409076 DGKGP49619 791 aa7.92□□□□□ -1.14
SNX13-201ENST00000409076 LIM2P55344 173 aa7.92□□□□□ -1.14
SNX13-201ENST00000409076 ABATP80404 500 aa7.92□□□□□ -1.14
SNX13-201ENST00000409076 ZNF91Q05481 1191 aa7.92□□□□□ -1.14
SNX13-201ENST00000409076 SCN1BQ07699 218 aa7.92□□□□□ -1.14
SNX13-201ENST00000409076 MPPE1Q53F39 396 aa7.92□□□□□ -1.14
SNX13-201ENST00000409076 ANXA8L1Q5VT79 327 aa7.92□□□□□ -1.14
SNX13-201ENST00000409076 FRMPD2BQ6IN97 320 aa7.92□□□□□ -1.14
SNX13-201ENST00000409076 C16orf62Q7Z3J2 963 aa7.92□□□□□ -1.14
SNX13-201ENST00000409076 GRASPQ7Z6J2 395 aaPredicted RBP7.92□□□□□ -1.14
SNX13-201ENST00000409076 C10orf53Q8N6V4 93 aa7.92□□□□□ -1.14
SNX13-201ENST00000409076 FRMD1Q8N878 549 aa7.92□□□□□ -1.14
SNX13-201ENST00000409076 FLCNQ8NFG4 579 aa7.92□□□□□ -1.14
SNX13-201ENST00000409076 OR52P1PQ8NH57 321 aa7.92□□□□□ -1.14
SNX13-201ENST00000409076 OR51A7Q8NH64 312 aa7.92□□□□□ -1.14
SNX13-201ENST00000409076 ADAMTS16Q8TE57 1224 aa7.92□□□□□ -1.14
SNX13-201ENST00000409076 BTN2A2Q8WVV5 523 aa7.92□□□□□ -1.14
SNX13-201ENST00000409076 KLHL6Q8WZ60 621 aa7.92□□□□□ -1.14
SNX13-201ENST00000409076 SNAPC3Q92966 411 aa7.92□□□□□ -1.14
SNX13-201ENST00000409076 USP7Q93009 1102 aa7.92□□□□□ -1.14
SNX13-201ENST00000409076 PIP5K1AQ99755 562 aa7.92□□□□□ -1.14
SNX13-201ENST00000409076 ZNF559Q9BR84 538 aa7.92□□□□□ -1.14
SNX13-201ENST00000409076 FAM120CQ9NX05 1096 aaKnown RBP7.92□□□□□ -1.14
SNX13-201ENST00000409076 ZNF282Q9UDV7 671 aaPredicted RBP7.92□□□□□ -1.14
SNX13-201ENST00000409076 ZNF639Q9UID6 485 aa7.92□□□□□ -1.14
SNX13-201ENST00000409076 PLEKHM1Q9Y4G2 1056 aa7.92□□□□□ -1.14
SNX13-201ENST00000409076 A0A1W2PRG6 482 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 PRAMEF25A6NGN4 478 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 POM121CA8CG34 1229 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 FAM47E-STBD1D6RA91 191 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 ERI3O43414 337 aaKnown RBP7.91□□□□□ -1.14
SNX13-201ENST00000409076 KLK8O60259 260 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 CDC123O75794 336 aaPredicted RBP7.91□□□□□ -1.14
SNX13-201ENST00000409076 PAK4O96013 591 aaPredicted RBP7.91□□□□□ -1.14
SNX13-201ENST00000409076 CCR4P51679 360 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 AP2S1P53680 142 aaPredicted RBP7.91□□□□□ -1.14
SNX13-201ENST00000409076 ANGPT1Q15389 498 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 GPR19Q15760 415 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 PRSS53Q2L4Q9 553 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 FIGNL1Q6PIW4 674 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 TRIM46Q7Z4K8 759 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 C17orf64Q86WR6 236 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 Q8N402 240 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 BOLLQ8N9W6 283 aaKnown RBP7.91□□□□□ -1.14
SNX13-201ENST00000409076 SLC37A3Q8NCC5 494 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 TEX47Q8TBZ9 253 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 RSPH9Q9H1X1 276 aaPredicted RBP7.91□□□□□ -1.14
SNX13-201ENST00000409076 OR51I1Q9H343 314 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 CACYBPQ9HB71 228 aaKnown RBP7.91□□□□□ -1.14
SNX13-201ENST00000409076 SNX7Q9UNH6 387 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 TNS1Q9HBL0 1735 aaKnown RBP7.91□□□□□ -1.14
SNX13-201ENST00000409076 FAM170BA6NMN3 283 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 PDPK1O15530 556 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 EEF1E1O43324 174 aaKnown RBP7.91□□□□□ -1.14
SNX13-201ENST00000409076 RAD1O60671 282 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 RASGRP1O95267 797 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 SAGP10523 405 aaPredicted RBP7.91□□□□□ -1.14
SNX13-201ENST00000409076 ITGAMP11215 1152 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 PAICSP22234 425 aaKnown RBP7.91□□□□□ -1.14
SNX13-201ENST00000409076 S100A1P23297 94 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 HCCSP53701 268 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 GPR33Q49SQ1 333 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 PRAMEF14Q5SWL7 426 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 PIP5KL1Q5T9C9 394 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 BCL2L15Q5TBC7 163 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 PRAMEF13Q5VWM6 474 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 ACSM5Q6NUN0 579 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 PLEKHM3Q6ZWE6 761 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 PARGQ86W56 976 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 AMIGO1Q86WK6 493 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 TRIM69Q86WT6 500 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 PJA1Q8NG27 643 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 OR4K5Q8NGD3 323 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 GEMIN6Q8WXD5 167 aaKnown RBP7.91□□□□□ -1.14
SNX13-201ENST00000409076 ZG16BQ96DA0 208 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms