RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 VPS4AQ9UN37 437 aa19.21■□□□□ 0.67
CHKB-201ENST00000406938 MMACHCQ9Y4U1 282 aa19.21■□□□□ 0.67
CHKB-201ENST00000406938 ZGLP1P0C6A0 271 aa19.2■□□□□ 0.66
CHKB-201ENST00000406938 SLC6A2P23975 617 aa19.2■□□□□ 0.66
CHKB-201ENST00000406938 GPC1P35052 558 aa19.2■□□□□ 0.66
CHKB-201ENST00000406938 SOAT1P35610 550 aa19.2■□□□□ 0.66
CHKB-201ENST00000406938 EFNA3P52797 238 aa19.2■□□□□ 0.66
CHKB-201ENST00000406938 FOXL2P58012 376 aa19.2■□□□□ 0.66
CHKB-201ENST00000406938 GABREP78334 506 aa19.2■□□□□ 0.66
CHKB-201ENST00000406938 IGLV3-21P80748 117 aaPredicted RBP19.2■□□□□ 0.66
CHKB-201ENST00000406938 RHAGQ02094 409 aa19.2■□□□□ 0.66
CHKB-201ENST00000406938 FAM198BQ6UWH4 519 aa19.2■□□□□ 0.66
CHKB-201ENST00000406938 ZNF517Q6ZMY9 492 aaPredicted RBP19.2■□□□□ 0.66
CHKB-201ENST00000406938 SHISA6Q6ZSJ9 500 aa19.2■□□□□ 0.66
CHKB-201ENST00000406938 PSMA8Q8TAA3 256 aa19.2■□□□□ 0.66
CHKB-201ENST00000406938 VN1R1Q9GZP7 353 aa19.2■□□□□ 0.66
CHKB-201ENST00000406938 CHST8Q9H2A9 424 aa19.2■□□□□ 0.66
CHKB-201ENST00000406938 SLC26A1Q9H2B4 701 aa19.2■□□□□ 0.66
CHKB-201ENST00000406938 POLR1BQ9H9Y6 1135 aa19.2■□□□□ 0.66
CHKB-201ENST00000406938 SPAG4Q9NPE6 437 aa19.2■□□□□ 0.66
CHKB-201ENST00000406938 NECTIN3Q9NQS3 549 aa19.2■□□□□ 0.66
CHKB-201ENST00000406938 SIRT3Q9NTG7 399 aaPredicted RBP19.2■□□□□ 0.66
CHKB-201ENST00000406938 MKL2Q9ULH7 1088 aa19.2■□□□□ 0.66
CHKB-201ENST00000406938 SNX8Q9Y5X2 465 aa19.2■□□□□ 0.66
CHKB-201ENST00000406938 NUP210LQ5VU65 1888 aa19.2■□□□□ 0.66
CHKB-201ENST00000406938 ANKRD65E5RJM6 399 aa19.19■□□□□ 0.66
CHKB-201ENST00000406938 CNOT3O75175 753 aaKnown RBP19.19■□□□□ 0.66
CHKB-201ENST00000406938 ALBP02768 609 aa19.19■□□□□ 0.66
CHKB-201ENST00000406938 ATP1B1P05026 303 aa19.19■□□□□ 0.66
CHKB-201ENST00000406938 ZCCHC18P0CG32 403 aa19.19■□□□□ 0.66
CHKB-201ENST00000406938 SLC7A2P52569 658 aa19.19■□□□□ 0.66
CHKB-201ENST00000406938 NKG7Q16617 165 aa19.19■□□□□ 0.66
CHKB-201ENST00000406938 RABL3Q5HYI8 236 aa19.19■□□□□ 0.66
CHKB-201ENST00000406938 MLIPQ5VWP3 458 aa19.19■□□□□ 0.66
CHKB-201ENST00000406938 CPZQ66K79 652 aa19.19■□□□□ 0.66
CHKB-201ENST00000406938 NANOGP8Q6NSW7 305 aa19.19■□□□□ 0.66
CHKB-201ENST00000406938 LAPTM4BQ86VI4 370 aa19.19■□□□□ 0.66
CHKB-201ENST00000406938 CLEC4FQ8N1N0 589 aa19.19■□□□□ 0.66
CHKB-201ENST00000406938 TRIML2Q8N7C3 387 aa19.19■□□□□ 0.66
CHKB-201ENST00000406938 OR5AK3PQ8NH89 298 aa19.19■□□□□ 0.66
CHKB-201ENST00000406938 TSLPQ969D9 159 aa19.19■□□□□ 0.66
CHKB-201ENST00000406938 PTCHD1Q96NR3 888 aa19.19■□□□□ 0.66
CHKB-201ENST00000406938 ANKRD27Q96NW4 1050 aa19.19■□□□□ 0.66
CHKB-201ENST00000406938 PHF12Q96QT6 1004 aa19.19■□□□□ 0.66
CHKB-201ENST00000406938 CADM1Q9BY67 442 aaKnown RBP19.19■□□□□ 0.66
CHKB-201ENST00000406938 ALOXE3Q9BYJ1 711 aa19.19■□□□□ 0.66
CHKB-201ENST00000406938 SPRY4Q9C004 299 aa19.19■□□□□ 0.66
CHKB-201ENST00000406938 SOX17Q9H6I2 414 aaPredicted RBP19.19■□□□□ 0.66
CHKB-201ENST00000406938 NANOGQ9H9S0 305 aa19.19■□□□□ 0.66
CHKB-201ENST00000406938 ACSL6Q9UKU0 697 aa19.19■□□□□ 0.66
CHKB-201ENST00000406938 SEC16AO15027 2179 aa19.18■□□□□ 0.66
CHKB-201ENST00000406938 IGKV3D-11A0A0A0MRZ8 115 aa19.18■□□□□ 0.66
CHKB-201ENST00000406938 VSTM2BA6NLU5 285 aa19.18■□□□□ 0.66
CHKB-201ENST00000406938 DNAJC8O75937 253 aaPredicted RBP19.18■□□□□ 0.66
CHKB-201ENST00000406938 SLC35E2P0CK97 266 aa19.18■□□□□ 0.66
CHKB-201ENST00000406938 MTPNP58546 118 aa19.18■□□□□ 0.66
CHKB-201ENST00000406938 MRPL14Q6P1L8 145 aaKnown RBP19.18■□□□□ 0.66
CHKB-201ENST00000406938 TMEM107Q6UX40 140 aa19.18■□□□□ 0.66
CHKB-201ENST00000406938 C6orf15Q6UXA7 325 aaPredicted RBP19.18■□□□□ 0.66
CHKB-201ENST00000406938 BNC2Q6ZN30 1099 aaPredicted RBP19.18■□□□□ 0.66
CHKB-201ENST00000406938 ADCY4Q8NFM4 1077 aa19.18■□□□□ 0.66
CHKB-201ENST00000406938 SLC35A5Q9BS91 424 aa19.18■□□□□ 0.66
CHKB-201ENST00000406938 CROCCQ5TZA2 2017 aa19.18■□□□□ 0.66
CHKB-201ENST00000406938 C15orf38-AP3S2A0A0A6YYH1 394 aa19.18■□□□□ 0.66
CHKB-201ENST00000406938 C9J4A7 227 aa19.18■□□□□ 0.66
CHKB-201ENST00000406938 GSC2O15499 205 aa19.18■□□□□ 0.66
CHKB-201ENST00000406938 OR10H2O60403 315 aa19.18■□□□□ 0.66
CHKB-201ENST00000406938 C1QCP02747 245 aa19.18■□□□□ 0.66
CHKB-201ENST00000406938 SELPLGQ14242 412 aa19.18■□□□□ 0.66
CHKB-201ENST00000406938 RUNDC3AQ59EK9 446 aa19.18■□□□□ 0.66
CHKB-201ENST00000406938 TIPARPQ7Z3E1 657 aaKnown RBP19.18■□□□□ 0.66
CHKB-201ENST00000406938 ARPINQ7Z6K5 226 aa19.18■□□□□ 0.66
CHKB-201ENST00000406938 TMEM151BQ8IW70 566 aa19.18■□□□□ 0.66
CHKB-201ENST00000406938 ST13P4Q8IZP2 240 aaPredicted RBP19.18■□□□□ 0.66
CHKB-201ENST00000406938 OR8J3Q8NGG0 315 aa19.18■□□□□ 0.66
CHKB-201ENST00000406938 TMEM125Q96AQ2 219 aa19.18■□□□□ 0.66
CHKB-201ENST00000406938 MCUR1Q96AQ8 359 aa19.18■□□□□ 0.66
CHKB-201ENST00000406938 PPWD1Q96BP3 646 aaKnown RBP19.18■□□□□ 0.66
CHKB-201ENST00000406938 SPSB2Q99619 263 aa19.18■□□□□ 0.66
CHKB-201ENST00000406938 CPPED1Q9BRF8 314 aaPredicted RBP19.18■□□□□ 0.66
CHKB-201ENST00000406938 THTPAQ9BU02 230 aa19.18■□□□□ 0.66
CHKB-201ENST00000406938 B3GNT4Q9C0J1 378 aa19.18■□□□□ 0.66
CHKB-201ENST00000406938 IKZF5Q9H5V7 419 aa19.18■□□□□ 0.66
CHKB-201ENST00000406938 WDR54Q9H977 334 aa19.18■□□□□ 0.66
CHKB-201ENST00000406938 SEMA3GQ9NS98 782 aa19.18■□□□□ 0.66
CHKB-201ENST00000406938 ADA2Q9NZK5 511 aa19.18■□□□□ 0.66
CHKB-201ENST00000406938 GPN3Q9UHW5 284 aaPredicted RBP19.18■□□□□ 0.66
CHKB-201ENST00000406938 SCN2AQ99250 2005 aa19.17■□□□□ 0.66
CHKB-201ENST00000406938 PTPRBP23467 1997 aa19.17■□□□□ 0.66
CHKB-201ENST00000406938 RNF103-CHMP3A0A140T963 221 aa19.17■□□□□ 0.66
CHKB-201ENST00000406938 RECKO95980 971 aa19.17■□□□□ 0.66
CHKB-201ENST00000406938 NT5EP21589 574 aa19.17■□□□□ 0.66
CHKB-201ENST00000406938 UQCRC2P22695 453 aa19.17■□□□□ 0.66
CHKB-201ENST00000406938 MC3RP41968 323 aa19.17■□□□□ 0.66
CHKB-201ENST00000406938 MRPS35P82673 323 aaKnown RBP19.17■□□□□ 0.66
CHKB-201ENST00000406938 SERTAD2Q14140 314 aa19.17■□□□□ 0.66
CHKB-201ENST00000406938 NCF4Q15080 339 aa19.17■□□□□ 0.66
CHKB-201ENST00000406938 SPDYE7PQ495Y7 208 aa19.17■□□□□ 0.66
CHKB-201ENST00000406938 SLC15A3Q8IY34 581 aa19.17■□□□□ 0.66
CHKB-201ENST00000406938 ZFP90Q8TF47 636 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms