RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 RHBDF1Q96CC6 855 aa10.84□□□□□ -0.67
SPTLC1P3-201ENST00000403408 PDLIM5Q96HC4 596 aaKnown RBP10.84□□□□□ -0.67
SPTLC1P3-201ENST00000403408 ZNF597Q96LX8 424 aa10.84□□□□□ -0.67
SPTLC1P3-201ENST00000403408 RILPQ96NA2 401 aa10.84□□□□□ -0.67
SPTLC1P3-201ENST00000403408 BAG1Q99933 345 aaPredicted RBP10.84□□□□□ -0.67
SPTLC1P3-201ENST00000403408 TMEM79Q9BSE2 394 aa10.84□□□□□ -0.67
SPTLC1P3-201ENST00000403408 WWTR1Q9GZV5 400 aa10.84□□□□□ -0.67
SPTLC1P3-201ENST00000403408 UBTD1Q9HAC8 227 aa10.84□□□□□ -0.67
SPTLC1P3-201ENST00000403408 XAB2Q9HCS7 855 aaKnown RBP10.84□□□□□ -0.67
SPTLC1P3-201ENST00000403408 LYRM4Q9HD34 91 aa10.84□□□□□ -0.67
SPTLC1P3-201ENST00000403408 DTX4Q9Y2E6 619 aa10.84□□□□□ -0.67
SPTLC1P3-201ENST00000403408 C15orf41Q9Y2V0 281 aa10.84□□□□□ -0.67
SPTLC1P3-201ENST00000403408 VWA7Q9Y334 891 aa10.84□□□□□ -0.67
SPTLC1P3-201ENST00000403408 IKBKGQ9Y6K9 419 aa10.84□□□□□ -0.67
SPTLC1P3-201ENST00000403408 TENM1Q9UKZ4 2725 aa10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 ANKRD33BA6NCL7 494 aa10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 A8MXE2 369 aa10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 TNFSF13O75888 250 aa10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 SOX30O94993 753 aa10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 CXCR5P32302 372 aa10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 PTH2RP49190 550 aa10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 NR1H2P55055 460 aa10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 SLC37A1P57057 533 aa10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 HERVK_113P63132 956 aa10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 ERVK-8P63133 956 aa10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 SARNPP82979 210 aaKnown RBP10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 PDAP1Q13442 181 aaKnown RBP10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 TEDDM1Q5T9Z0 273 aa10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 C18orf63Q68DL7 685 aa10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 TRIM40Q6P9F5 258 aa10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 TRMT10BQ6PF06 316 aaKnown RBP10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 YRDCQ86U90 279 aaKnown RBP10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 PM20D2Q8IYS1 436 aa10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 GCNT2Q8N0V5 402 aa10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 RNF175Q8N4F7 328 aa10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 GPATCH11Q8N954 259 aa10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 ACOT4Q8N9L9 421 aa10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 SPPL2AQ8TCT8 520 aa10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 ZPLD1Q8TCW7 415 aa10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 ABTB1Q969K4 478 aaPredicted RBP10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 PIGTQ969N2 578 aa10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 ESAMQ96AP7 390 aa10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 INTS12Q96CB8 462 aaKnown RBP10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 FBXL20Q96IG2 436 aa10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 GAL3ST4Q96RP7 486 aa10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 CCL19Q99731 98 aa10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 ERVK-6Q9BXR3 956 aa10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 ANGPTL4Q9BY76 406 aa10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 TRIM54Q9BYV2 358 aa10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 GSX2Q9BZM3 304 aa10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 KLHL28Q9NXS3 571 aa10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 COPS7AQ9UBW8 275 aa10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 GUCA1BQ9UMX6 200 aa10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 ERVK-19Q9WJR5 959 aa10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 ZKSCAN5Q9Y2L8 839 aa10.83□□□□□ -0.68
SPTLC1P3-201ENST00000403408 PCNX3Q9H6A9 2034 aa10.82□□□□□ -0.68
SPTLC1P3-201ENST00000403408 SCELO95171 688 aa10.82□□□□□ -0.68
SPTLC1P3-201ENST00000403408 RCBTB2O95199 551 aa10.82□□□□□ -0.68
SPTLC1P3-201ENST00000403408 ZNF37AP17032 561 aaPredicted RBP10.82□□□□□ -0.68
SPTLC1P3-201ENST00000403408 GNAZP19086 355 aa10.82□□□□□ -0.68
SPTLC1P3-201ENST00000403408 PTPN6P29350 595 aa10.82□□□□□ -0.68
SPTLC1P3-201ENST00000403408 PTGDSP41222 190 aa10.82□□□□□ -0.68
SPTLC1P3-201ENST00000403408 CASP3P42574 277 aa10.82□□□□□ -0.68
SPTLC1P3-201ENST00000403408 MSH2P43246 934 aa10.82□□□□□ -0.68
SPTLC1P3-201ENST00000403408 CDKL1Q00532 357 aa10.82□□□□□ -0.68
SPTLC1P3-201ENST00000403408 DOC2AQ14183 400 aa10.82□□□□□ -0.68
SPTLC1P3-201ENST00000403408 TSNQ15631 228 aaKnown RBP10.82□□□□□ -0.68
SPTLC1P3-201ENST00000403408 ZNF474Q6S9Z5 364 aaPredicted RBP10.82□□□□□ -0.68
SPTLC1P3-201ENST00000403408 BBOF1Q8ND07 529 aa10.82□□□□□ -0.68
SPTLC1P3-201ENST00000403408 FAM83FQ8NEG4 500 aaPredicted RBP10.82□□□□□ -0.68
SPTLC1P3-201ENST00000403408 TTLQ8NG68 377 aa10.82□□□□□ -0.68
SPTLC1P3-201ENST00000403408 DIO2Q92813 273 aa10.82□□□□□ -0.68
SPTLC1P3-201ENST00000403408 PIK3IP1Q96FE7 263 aa10.82□□□□□ -0.68
SPTLC1P3-201ENST00000403408 DGAT2Q96PD7 388 aa10.82□□□□□ -0.68
SPTLC1P3-201ENST00000403408 SFXN3Q9BWM7 321 aa10.82□□□□□ -0.68
SPTLC1P3-201ENST00000403408 MS4A8Q9BY19 250 aa10.82□□□□□ -0.68
SPTLC1P3-201ENST00000403408 CLCF1Q9UBD9 225 aa10.82□□□□□ -0.68
SPTLC1P3-201ENST00000403408 OARD1Q9Y530 152 aa10.82□□□□□ -0.68
SPTLC1P3-201ENST00000403408 PSAT1Q9Y617 370 aa10.82□□□□□ -0.68
SPTLC1P3-201ENST00000403408 A0A087X1B8 175 aa10.81□□□□□ -0.68
SPTLC1P3-201ENST00000403408 C2orf72A6NCS6 295 aa10.81□□□□□ -0.68
SPTLC1P3-201ENST00000403408 SYNDIG1LA6NDD5 238 aa10.81□□□□□ -0.68
SPTLC1P3-201ENST00000403408 ANKDD1BA6NHY2 528 aa10.81□□□□□ -0.68
SPTLC1P3-201ENST00000403408 B4DXG7 233 aa10.81□□□□□ -0.68
SPTLC1P3-201ENST00000403408 SAP18O00422 153 aaKnown RBP10.81□□□□□ -0.68
SPTLC1P3-201ENST00000403408 GNB5O14775 395 aa10.81□□□□□ -0.68
SPTLC1P3-201ENST00000403408 H2AFYO75367 372 aaKnown RBP10.81□□□□□ -0.68
SPTLC1P3-201ENST00000403408 ERN1O75460 977 aaKnown RBP10.81□□□□□ -0.68
SPTLC1P3-201ENST00000403408 TGM6O95932 706 aa10.81□□□□□ -0.68
SPTLC1P3-201ENST00000403408 C8BP07358 591 aa10.81□□□□□ -0.68
SPTLC1P3-201ENST00000403408 PGAM1P18669 254 aa10.81□□□□□ -0.68
SPTLC1P3-201ENST00000403408 HIST1H1TP22492 207 aaPredicted RBP10.81□□□□□ -0.68
SPTLC1P3-201ENST00000403408 SERPINB3P29508 390 aa10.81□□□□□ -0.68
SPTLC1P3-201ENST00000403408 MC3RP41968 323 aa10.81□□□□□ -0.68
SPTLC1P3-201ENST00000403408 STARP49675 285 aa10.81□□□□□ -0.68
SPTLC1P3-201ENST00000403408 TNK1Q13470 666 aa10.81□□□□□ -0.68
SPTLC1P3-201ENST00000403408 ZNF267Q14586 743 aaPredicted RBP10.81□□□□□ -0.68
SPTLC1P3-201ENST00000403408 HMBOX1Q6NT76 420 aa10.81□□□□□ -0.68
SPTLC1P3-201ENST00000403408 ZNF550Q7Z398 422 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms