RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 CTHP32929 405 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 ARG2P78540 354 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 SOX4Q06945 474 aaPredicted RBP13.16□□□□□ -0.3
VAPA-202ENST00000400000 FAM205BPQ63HN1 556 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 DCAF4L2Q8NA75 395 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 CHST14Q8NCH0 376 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 SYPP08247 313 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 UQCRC2P22695 453 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 RTP2Q5QGT7 225 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 ZNF852Q6ZMS4 543 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 NIPA2Q8N8Q9 360 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 CNEP1R1Q8N9A8 125 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 OR4K13Q8NH42 304 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 RAB2BQ8WUD1 216 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 KCNJ9Q92806 393 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 PCDH10Q9P2E7 1040 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 TP53I11O14683 189 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 CD3GP09693 182 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 IFNGR1P15260 489 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 GJA5P36382 358 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 SLC36A3Q495N2 470 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 SDSLQ96GA7 329 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 PAPOLGQ9BWT3 736 aaKnown RBP13.16□□□□□ -0.3
VAPA-202ENST00000400000 SORBS1Q9BX66 1292 aaKnown RBP13.16□□□□□ -0.3
VAPA-202ENST00000400000 ZIM2Q9NZV7 527 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 EXTL2Q9UBQ6 330 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 SGK494L7N484 410 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 PPM1BO75688 479 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 RUNX3Q13761 415 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 CST6Q15828 149 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 CES4AQ5XG92 561 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 REEP3Q6NUK4 255 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 OR9K2Q8NGE7 335 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 TLCD1Q96CP7 247 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 ASB9Q96DX5 294 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 NECAB3Q96P71 396 aaPredicted RBP13.16□□□□□ -0.3
VAPA-202ENST00000400000 OR5B2Q96R09 309 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 DNTTIP1Q9H147 329 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 ZBTB26Q9HCK0 441 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 SIX4Q9UIU6 781 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 RFXAPO00287 272 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 FBP2O00757 339 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 RAB4BP61018 213 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 CHRNEQ04844 493 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 CATSPEREQ5SY80 951 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 DUS1LQ6P1R4 473 aaKnown RBP13.16□□□□□ -0.3
VAPA-202ENST00000400000 XKR5Q6UX68 686 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 ZNF384Q8TF68 577 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 AKAP1Q92667 903 aaKnown RBP eCLIP13.16□□□□□ -0.3
VAPA-202ENST00000400000 ADAM18Q9Y3Q7 739 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.16□□□□□ -0.3
VAPA-202ENST00000400000 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.16□□□□□ -0.3
VAPA-202ENST00000400000 CDC14CA4D256 554 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 SEMA4FO95754 770 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 EBLN1P0CF75 366 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 TRAM2Q15035 370 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 SFT2D3Q587I9 215 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 SWT1Q5T5J6 900 aaKnown RBP13.16□□□□□ -0.3
VAPA-202ENST00000400000 LMNTD1Q8N9Z9 388 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 C2CD4AQ8NCU7 369 aaPredicted RBP13.16□□□□□ -0.3
VAPA-202ENST00000400000 OR52P1PQ8NH57 321 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 ELP5Q8TE02 316 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 NEDD4LQ96PU5 975 aa13.16□□□□□ -0.3
VAPA-202ENST00000400000 STT3AP46977 705 aa13.15□□□□□ -0.3
VAPA-202ENST00000400000 KCNC1P48547 511 aa13.15□□□□□ -0.3
VAPA-202ENST00000400000 HAGHLQ6PII5 290 aaPredicted RBP13.15□□□□□ -0.3
VAPA-202ENST00000400000 CLECL1Q8IZS7 167 aa13.15□□□□□ -0.3
VAPA-202ENST00000400000 SCGB3A2Q96PL1 93 aa13.15□□□□□ -0.3
VAPA-202ENST00000400000 RNF6Q9Y252 685 aa13.15□□□□□ -0.3
VAPA-202ENST00000400000 CA5BQ9Y2D0 317 aa13.15□□□□□ -0.3
VAPA-202ENST00000400000 TBX10O75333 385 aa13.15□□□□□ -0.3
VAPA-202ENST00000400000 RFC2P35250 354 aa13.15□□□□□ -0.3
VAPA-202ENST00000400000 EFR3AQ14156 821 aa13.15□□□□□ -0.3
VAPA-202ENST00000400000 CDKN3Q16667 212 aa13.15□□□□□ -0.3
VAPA-202ENST00000400000 EPGNQ6UW88 154 aa13.15□□□□□ -0.3
VAPA-202ENST00000400000 OR4C15Q8NGM1 316 aa13.15□□□□□ -0.3
VAPA-202ENST00000400000 MARCH4Q9P2E8 410 aaPredicted RBP13.15□□□□□ -0.3
VAPA-202ENST00000400000 MED16Q9Y2X0 877 aa13.15□□□□□ -0.3
VAPA-202ENST00000400000 IGKV6D-41A0A0C4DH26 115 aa13.15□□□□□ -0.3
VAPA-202ENST00000400000 TRBV2A0A0J9YWF9 115 aa13.15□□□□□ -0.3
VAPA-202ENST00000400000 FBXO45P0C2W1 286 aa13.15□□□□□ -0.3
VAPA-202ENST00000400000 PPA1Q15181 289 aa13.15□□□□□ -0.3
VAPA-202ENST00000400000 AADACL4Q5VUY2 407 aa13.15□□□□□ -0.3
VAPA-202ENST00000400000 PAMR1Q6UXH9 720 aa13.15□□□□□ -0.3
VAPA-202ENST00000400000 MFSD8Q8NHS3 518 aa13.15□□□□□ -0.3
VAPA-202ENST00000400000 PELOQ9BRX2 385 aaKnown RBP13.15□□□□□ -0.3
VAPA-202ENST00000400000 HDHD5Q9BXW7 423 aa13.15□□□□□ -0.3
VAPA-202ENST00000400000 KCND1Q9NSA2 647 aa13.15□□□□□ -0.3
VAPA-202ENST00000400000 CD207Q9UJ71 328 aa13.15□□□□□ -0.3
VAPA-202ENST00000400000 A8MVJ9 347 aa13.15□□□□□ -0.3
VAPA-202ENST00000400000 ZER1Q7Z7L7 766 aa13.15□□□□□ -0.3
VAPA-202ENST00000400000 PQLC3Q8N755 202 aa13.15□□□□□ -0.3
VAPA-202ENST00000400000 ST6GALNAC4Q9H4F1 302 aa13.15□□□□□ -0.3
VAPA-202ENST00000400000 VSX1Q9NZR4 365 aaPredicted RBP13.15□□□□□ -0.3
VAPA-202ENST00000400000 B4GALT7Q9UBV7 327 aa13.15□□□□□ -0.3
VAPA-202ENST00000400000 PCDHGB2Q9Y5G2 931 aa13.15□□□□□ -0.3
VAPA-202ENST00000400000 EEF1E1-BLOC1S5C9J1V9 151 aa13.15□□□□□ -0.3
VAPA-202ENST00000400000 F5H5K5 113 aa13.15□□□□□ -0.3
VAPA-202ENST00000400000 ABOP16442 354 aa13.15□□□□□ -0.3
VAPA-202ENST00000400000 RPL19P84098 196 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms