RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 AGFG1P52594 562 aaKnown RBP16.24■□□□□ 0.19
PTPRA-205ENST00000399903 WNT3P56703 355 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 FRG2Q64ET8 278 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 MTFR2Q6P444 385 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 UBE2R2Q712K3 238 aaPredicted RBP16.24■□□□□ 0.19
PTPRA-205ENST00000399903 FRG2BQ96QU4 278 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 NTMT1Q9BV86 223 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 SORBS1Q9BX66 1292 aaKnown RBP16.24■□□□□ 0.19
PTPRA-205ENST00000399903 ACER3Q9NUN7 267 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 NDUFB11Q9NX14 153 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 CLEC4EQ9ULY5 219 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 CD8B2A6NJW9 211 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 SSNA1O43805 119 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 GCM2O75603 506 aaPredicted RBP16.24■□□□□ 0.19
PTPRA-205ENST00000399903 CD8BP10966 210 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 ACADMP11310 421 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 SRP9P49458 86 aaKnown RBP16.24■□□□□ 0.19
PTPRA-205ENST00000399903 CACNG1Q06432 222 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 LRRC73Q5JTD7 316 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 IDNKQ5T6J7 187 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 C19orf48Q6RUI8 117 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 DNAJB7Q7Z6W7 309 aaPredicted RBP16.24■□□□□ 0.19
PTPRA-205ENST00000399903 PIAS4Q8N2W9 510 aaPredicted RBP16.24■□□□□ 0.19
PTPRA-205ENST00000399903 CMTM7Q96FZ5 175 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 TMEM169Q96HH4 297 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 MAPKAP1Q9BPZ7 522 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 SLC32A1Q9H598 525 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 EXTL2Q9UBQ6 330 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 GPR52Q9Y2T5 361 aa16.24■□□□□ 0.19
PTPRA-205ENST00000399903 PIKFYVEQ9Y2I7 2098 aa16.23■□□□□ 0.19
PTPRA-205ENST00000399903 SH3D21A4FU49 640 aa16.23■□□□□ 0.19
PTPRA-205ENST00000399903 GABRR3A8MPY1 467 aa16.23■□□□□ 0.19
PTPRA-205ENST00000399903 IL1AP01583 271 aa16.23■□□□□ 0.19
PTPRA-205ENST00000399903 ANXA4P09525 319 aaPredicted RBP16.23■□□□□ 0.19
PTPRA-205ENST00000399903 XKP51811 444 aa16.23■□□□□ 0.19
PTPRA-205ENST00000399903 TEKQ02763 1124 aa16.23■□□□□ 0.19
PTPRA-205ENST00000399903 COX10Q12887 443 aa16.23■□□□□ 0.19
PTPRA-205ENST00000399903 VEZF1Q14119 521 aa16.23■□□□□ 0.19
PTPRA-205ENST00000399903 UNC5DQ6UXZ4 953 aa16.23■□□□□ 0.19
PTPRA-205ENST00000399903 SZRD1Q7Z422 152 aa16.23■□□□□ 0.19
PTPRA-205ENST00000399903 TADA1Q96BN2 335 aa16.23■□□□□ 0.19
PTPRA-205ENST00000399903 ASIC4Q96FT7 647 aa16.23■□□□□ 0.19
PTPRA-205ENST00000399903 MED8Q96G25 268 aa16.23■□□□□ 0.19
PTPRA-205ENST00000399903 FERD3LQ96RJ6 166 aa16.23■□□□□ 0.19
PTPRA-205ENST00000399903 SAP130Q9H0E3 1048 aa16.23■□□□□ 0.19
PTPRA-205ENST00000399903 ELAC1Q9H777 363 aaKnown RBP16.23■□□□□ 0.19
PTPRA-205ENST00000399903 ZNF334Q9HCZ1 680 aaPredicted RBP16.23■□□□□ 0.19
PTPRA-205ENST00000399903 EXO1Q9UQ84 846 aaKnown RBP16.23■□□□□ 0.19
PTPRA-205ENST00000399903 PROM1O43490 865 aa16.23■□□□□ 0.19
PTPRA-205ENST00000399903 CFDP00746 253 aaPredicted RBP16.23■□□□□ 0.19
PTPRA-205ENST00000399903 NR2F6P10588 404 aa16.23■□□□□ 0.19
PTPRA-205ENST00000399903 STOMP27105 288 aa16.23■□□□□ 0.19
PTPRA-205ENST00000399903 YBEYP58557 167 aaPredicted RBP16.23■□□□□ 0.19
PTPRA-205ENST00000399903 ARF5P84085 180 aa16.23■□□□□ 0.19
PTPRA-205ENST00000399903 ELAVL2Q12926 359 aaKnown RBP16.23■□□□□ 0.19
PTPRA-205ENST00000399903 HEPACAMQ14CZ8 416 aa16.23■□□□□ 0.19
PTPRA-205ENST00000399903 TMEM81Q6P7N7 255 aa16.23■□□□□ 0.19
PTPRA-205ENST00000399903 KANSL1Q7Z3B3 1105 aa16.23■□□□□ 0.19
PTPRA-205ENST00000399903 PRSS42Q7Z5A4 293 aa16.23■□□□□ 0.19
PTPRA-205ENST00000399903 MARCH9Q86YJ5 346 aa16.23■□□□□ 0.19
PTPRA-205ENST00000399903 C1orf52Q8N6N3 182 aaKnown RBP16.23■□□□□ 0.19
PTPRA-205ENST00000399903 OTUB1Q96FW1 271 aaPredicted RBP16.23■□□□□ 0.19
PTPRA-205ENST00000399903 PIP5K1AQ99755 562 aa16.23■□□□□ 0.19
PTPRA-205ENST00000399903 C2orf49Q9BVC5 232 aaPredicted RBP16.23■□□□□ 0.19
PTPRA-205ENST00000399903 SPRTNQ9H040 489 aaPredicted RBP16.23■□□□□ 0.19
PTPRA-205ENST00000399903 UBQLN2Q9UHD9 624 aa16.23■□□□□ 0.19
PTPRA-205ENST00000399903 RPL36Q9Y3U8 105 aaKnown RBP16.23■□□□□ 0.19
PTPRA-205ENST00000399903 DNAH14Q0VDD8 3507 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 MYOFQ9NZM1 2061 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 CHP2O43745 196 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 HCN1O60741 890 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 DHFRP00374 187 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 MAPKAPK2P49137 400 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 RPS26P62854 115 aaKnown RBP16.22■□□□□ 0.19
PTPRA-205ENST00000399903 RING1Q06587 406 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 GRM7Q14831 915 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 XKR6Q5GH73 641 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 HSDL2Q6YN16 418 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 GDPGP1Q6ZNW5 385 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 FAM9CQ8IZT9 166 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 POLR2J3Q9H1A7 115 aaKnown RBP16.22■□□□□ 0.19
PTPRA-205ENST00000399903 CWH43Q9H720 699 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 ELF5Q9UKW6 265 aaPredicted RBP16.22■□□□□ 0.19
PTPRA-205ENST00000399903 HCN2Q9UL51 889 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 PATJQ8NI35 1801 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 CEP290O15078 2479 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 EEF1E1O43324 174 aaKnown RBP16.22■□□□□ 0.19
PTPRA-205ENST00000399903 SLC43A1O75387 559 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 IFNA7P01567 189 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 SOX18P35713 384 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 TALDO1P37837 337 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 RPS26P11Q5JNZ5 115 aaPredicted RBP16.22■□□□□ 0.19
PTPRA-205ENST00000399903 SLC8B1Q6J4K2 584 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 SLC30A8Q8IWU4 369 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 CRIPAKQ8N1N5 446 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 SDR16C5Q8N3Y7 309 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 ZNF461Q8TAF7 563 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 ST8SIA4Q92187 359 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 PIGKQ92643 395 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 SLC35A5Q9BS91 424 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms