RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 PTCHD1Q96NR3 888 aa13.32□□□□□ -0.28
SCAF4-202ENST00000399804 OR51V1Q9H2C8 321 aa13.32□□□□□ -0.28
SCAF4-202ENST00000399804 ENPP4Q9Y6X5 453 aa13.32□□□□□ -0.28
SCAF4-202ENST00000399804 TSPAN11A1L157 253 aa13.32□□□□□ -0.28
SCAF4-202ENST00000399804 TLX2O43763 284 aaPredicted RBP13.32□□□□□ -0.28
SCAF4-202ENST00000399804 ABCB7O75027 752 aa13.32□□□□□ -0.28
SCAF4-202ENST00000399804 ETHE1O95571 254 aa13.32□□□□□ -0.28
SCAF4-202ENST00000399804 IFNGP01579 166 aa13.32□□□□□ -0.28
SCAF4-202ENST00000399804 RNH1P13489 461 aaKnown RBP13.32□□□□□ -0.28
SCAF4-202ENST00000399804 CDKN3Q16667 212 aa13.32□□□□□ -0.28
SCAF4-202ENST00000399804 NELL2Q99435 816 aa13.32□□□□□ -0.28
SCAF4-202ENST00000399804 TRNAU1APQ9NX07 287 aaKnown RBP13.32□□□□□ -0.28
SCAF4-202ENST00000399804 SSR3Q9UNL2 185 aa13.32□□□□□ -0.28
SCAF4-202ENST00000399804 ANTXRLA6NF34 631 aa13.31□□□□□ -0.28
SCAF4-202ENST00000399804 TCF3P15923 654 aa13.31□□□□□ -0.28
SCAF4-202ENST00000399804 DEFB133Q30KQ1 61 aa13.31□□□□□ -0.28
SCAF4-202ENST00000399804 ARHGAP40Q5TG30 622 aa13.31□□□□□ -0.28
SCAF4-202ENST00000399804 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.31□□□□□ -0.28
SCAF4-202ENST00000399804 DRAXINQ8NBI3 349 aaPredicted RBP13.31□□□□□ -0.28
SCAF4-202ENST00000399804 RNFT2Q96EX2 444 aa13.31□□□□□ -0.28
SCAF4-202ENST00000399804 PEX11GQ96HA9 241 aa13.31□□□□□ -0.28
SCAF4-202ENST00000399804 PLGRKTQ9HBL7 147 aa13.31□□□□□ -0.28
SCAF4-202ENST00000399804 DAPK2Q9UIK4 370 aa13.31□□□□□ -0.28
SCAF4-202ENST00000399804 SERTAD3Q9UJW9 196 aa13.31□□□□□ -0.28
SCAF4-202ENST00000399804 HAT1O14929 419 aa13.31□□□□□ -0.28
SCAF4-202ENST00000399804 KCNK5O95279 499 aa13.31□□□□□ -0.28
SCAF4-202ENST00000399804 PABPC4LP0CB38 370 aaKnown RBP13.31□□□□□ -0.28
SCAF4-202ENST00000399804 PSMA1P25786 263 aaKnown RBP13.31□□□□□ -0.28
SCAF4-202ENST00000399804 PERM1Q5SV97 790 aa13.31□□□□□ -0.28
SCAF4-202ENST00000399804 NLRP8Q86W28 1048 aa13.31□□□□□ -0.28
SCAF4-202ENST00000399804 DCP2Q8IU60 420 aaKnown RBP13.31□□□□□ -0.28
SCAF4-202ENST00000399804 FAM86B1Q8N7N1 296 aa13.31□□□□□ -0.28
SCAF4-202ENST00000399804 TCEANCQ8N8B7 351 aa13.31□□□□□ -0.28
SCAF4-202ENST00000399804 SUN3Q8TAQ9 357 aa13.31□□□□□ -0.28
SCAF4-202ENST00000399804 PIGKQ92643 395 aa13.31□□□□□ -0.28
SCAF4-202ENST00000399804 HLA-CQ95604 372 aa13.31□□□□□ -0.28
SCAF4-202ENST00000399804 PMEPA1Q969W9 287 aa13.31□□□□□ -0.28
SCAF4-202ENST00000399804 GAL3ST3Q96A11 431 aa13.31□□□□□ -0.28
SCAF4-202ENST00000399804 IFT27Q9BW83 186 aa13.31□□□□□ -0.28
SCAF4-202ENST00000399804 GTPBP2Q9BX10 602 aaKnown RBP13.31□□□□□ -0.28
SCAF4-202ENST00000399804 SGPP1Q9BX95 441 aa13.31□□□□□ -0.28
SCAF4-202ENST00000399804 SLC25A37Q9NYZ2 338 aa13.31□□□□□ -0.28
SCAF4-202ENST00000399804 UBAP1Q9NZ09 502 aa13.31□□□□□ -0.28
SCAF4-202ENST00000399804 ABCG2Q9UNQ0 655 aa13.31□□□□□ -0.28
SCAF4-202ENST00000399804 RALGAPA2Q2PPJ7 1873 aa13.31□□□□□ -0.28
SCAF4-202ENST00000399804 TOR1BO14657 336 aa13.31□□□□□ -0.28
SCAF4-202ENST00000399804 CD36P16671 472 aa13.31□□□□□ -0.28
SCAF4-202ENST00000399804 CD38P28907 300 aa13.31□□□□□ -0.28
SCAF4-202ENST00000399804 AHRP35869 848 aa13.31□□□□□ -0.28
SCAF4-202ENST00000399804 MYBPC1Q00872 1141 aa13.31□□□□□ -0.28
SCAF4-202ENST00000399804 CD47Q08722 323 aa13.31□□□□□ -0.28
SCAF4-202ENST00000399804 KIAA0895LQ68EN5 471 aa13.31□□□□□ -0.28
SCAF4-202ENST00000399804 FIGNL1Q6PIW4 674 aa13.31□□□□□ -0.28
SCAF4-202ENST00000399804 CBLL1Q75N03 491 aa13.31□□□□□ -0.28
SCAF4-202ENST00000399804 MFSD2AQ8NA29 543 aa13.31□□□□□ -0.28
SCAF4-202ENST00000399804 DENND6BQ8NEG7 585 aa13.31□□□□□ -0.28
SCAF4-202ENST00000399804 IKZF5Q9H5V7 419 aa13.31□□□□□ -0.28
SCAF4-202ENST00000399804 TUBA8Q9NY65 449 aaPredicted RBP13.31□□□□□ -0.28
SCAF4-202ENST00000399804 AGAP14A8MT82 685 aa13.3□□□□□ -0.28
SCAF4-202ENST00000399804 PLPP1O14494 284 aa13.3□□□□□ -0.28
SCAF4-202ENST00000399804 PRR35P0CG20 571 aa13.3□□□□□ -0.28
SCAF4-202ENST00000399804 GUCA1AP43080 201 aaPredicted RBP13.3□□□□□ -0.28
SCAF4-202ENST00000399804 ADAM15Q13444 863 aa13.3□□□□□ -0.28
SCAF4-202ENST00000399804 CLCA4Q14CN2 919 aa13.3□□□□□ -0.28
SCAF4-202ENST00000399804 TOMM20Q15388 145 aa13.3□□□□□ -0.28
SCAF4-202ENST00000399804 PTCRAQ6ISU1 281 aaPredicted RBP13.3□□□□□ -0.28
SCAF4-202ENST00000399804 SIX5Q8N196 739 aa13.3□□□□□ -0.28
SCAF4-202ENST00000399804 OR52P1PQ8NH57 321 aa13.3□□□□□ -0.28
SCAF4-202ENST00000399804 ZNF300Q96RE9 604 aaPredicted RBP13.3□□□□□ -0.28
SCAF4-202ENST00000399804 C6orf106Q9H6K1 298 aaPredicted RBP13.3□□□□□ -0.28
SCAF4-202ENST00000399804 MGAT4BQ9UQ53 548 aa13.3□□□□□ -0.28
SCAF4-202ENST00000399804 RPL36Q9Y3U8 105 aaKnown RBP13.3□□□□□ -0.28
SCAF4-202ENST00000399804 IL12BP29460 328 aa13.3□□□□□ -0.28
SCAF4-202ENST00000399804 TIGD6Q17RP2 521 aa13.3□□□□□ -0.28
SCAF4-202ENST00000399804 OR4C6Q8NH72 309 aa13.3□□□□□ -0.28
SCAF4-202ENST00000399804 CCL4L1Q8NHW4 92 aa13.3□□□□□ -0.28
SCAF4-202ENST00000399804 WDR20Q8TBZ3 569 aa13.3□□□□□ -0.28
SCAF4-202ENST00000399804 ZFP90Q8TF47 636 aa13.3□□□□□ -0.28
SCAF4-202ENST00000399804 FCRL4Q96PJ5 515 aa13.3□□□□□ -0.28
SCAF4-202ENST00000399804 DNAJC27Q9NZQ0 273 aa13.3□□□□□ -0.28
SCAF4-202ENST00000399804 MMP17Q9ULZ9 603 aa13.3□□□□□ -0.28
SCAF4-202ENST00000399804 WDR37Q9Y2I8 494 aa13.3□□□□□ -0.28
SCAF4-202ENST00000399804 SIP14410 1827 aa13.3□□□□□ -0.28
SCAF4-202ENST00000399804 SLC9B1P1A6NJY1 282 aa13.3□□□□□ -0.28
SCAF4-202ENST00000399804 RIIAD1A6NNX1 92 aa13.3□□□□□ -0.28
SCAF4-202ENST00000399804 FAM25AB3EWG3 89 aa13.3□□□□□ -0.28
SCAF4-202ENST00000399804 FAM25CB3EWG5 89 aa13.3□□□□□ -0.28
SCAF4-202ENST00000399804 FAM25GB3EWG6 89 aa13.3□□□□□ -0.28
SCAF4-202ENST00000399804 OR2B3O76000 313 aa13.3□□□□□ -0.28
SCAF4-202ENST00000399804 GSTM3P21266 225 aa13.3□□□□□ -0.28
SCAF4-202ENST00000399804 PSMD4P55036 377 aaKnown RBP13.3□□□□□ -0.28
SCAF4-202ENST00000399804 POU6F2P78424 691 aaPredicted RBP13.3□□□□□ -0.28
SCAF4-202ENST00000399804 TXNL4AP83876 142 aaKnown RBP13.3□□□□□ -0.28
SCAF4-202ENST00000399804 REEP5Q00765 189 aa13.3□□□□□ -0.28
SCAF4-202ENST00000399804 PIN1Q13526 163 aaPredicted RBP13.3□□□□□ -0.28
SCAF4-202ENST00000399804 GPR18Q14330 331 aa13.3□□□□□ -0.28
SCAF4-202ENST00000399804 TRAM2Q15035 370 aa13.3□□□□□ -0.28
SCAF4-202ENST00000399804 WDR53Q7Z5U6 358 aaPredicted RBP13.3□□□□□ -0.28
SCAF4-202ENST00000399804 CCDC103Q8IW40 242 aa13.3□□□□□ -0.28
SCAF4-202ENST00000399804 GALNT12Q8IXK2 581 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms