RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 SOX17Q9H6I2 414 aaPredicted RBP10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 RANBP3Q9H6Z4 567 aaPredicted RBP10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 PNPOQ9NVS9 261 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 C1orf109Q9NX04 203 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 NUFIP1Q9UHK0 495 aaKnown RBP10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 NPC1O15118 1278 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 LATO43561 262 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 CSTAP01040 98 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 TIMP2P16035 220 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 GJA5P36382 358 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 NOVA1P51513 510 aaKnown RBP10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 RPS13P62277 151 aaKnown RBP10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 ABRAXAS2Q15018 415 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 C9orf135Q5VTT2 229 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 DCAF12L1Q5VU92 463 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 GLYATQ6IB77 296 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 NCEH1Q6PIU2 408 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 CDHR3Q6ZTQ4 885 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 RNF175Q8N4F7 328 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 SLC25A44Q96H78 314 aaPredicted RBP10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 BARD1Q99728 777 aaKnown RBP10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 UTP23Q9BRU9 249 aaKnown RBP10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 WDR55Q9H6Y2 383 aaPredicted RBP10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 TM9SF3Q9HD45 589 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 GCM1Q9NP62 436 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 OBP2BQ9NPH6 170 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 ABRACLQ9P1F3 81 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 ZNF223Q9UK11 482 aaPredicted RBP10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 KIF1AQ12756 1690 aa10.52□□□□□ -0.73
CACNA1C-216ENST00000399638 NALCNQ8IZF0 1738 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 SIGLEC1Q9BZZ2 1709 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 TSTD3H0UI37 97 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 SLC31A2O15432 143 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 LCMT2O60294 686 aaKnown RBP10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 BPGMP07738 259 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 SRPRAP08240 638 aaKnown RBP10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 CEBPBP17676 345 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 ARHGAP8P85298 464 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 TDGQ13569 410 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 MRPL21Q7Z2W9 205 aaKnown RBP10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 ERI1Q8IV48 349 aaKnown RBP10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 OR56A1Q8NGH5 318 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 KREMEN1Q96MU8 473 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 PCDHB18PQ96TA0 734 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 MECRQ9BV79 373 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 SLC2A8Q9NY64 477 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 CICQ96RK0 1608 aaPredicted RBP10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 UNCXA6NJT0 531 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 PRPS2P11908 318 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 GBE1Q04446 702 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 SPIN4Q56A73 249 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 TMEM31Q5JXX7 168 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 SLC44A1Q8WWI5 657 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 OR5B12Q96R08 314 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 RBM24Q9BX46 236 aaKnown RBP10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 RGCCQ9H4X1 137 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 RAB9BQ9NP90 201 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 SLC17A7Q9P2U7 560 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 C2orf92A0A1B0GVN3 265 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 OR51F1A6NGY5 319 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 C9JVG2 144 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 J3QLW9 94 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 TCAPO15273 167 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 NIPSNAP2O75323 286 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 ZNF19P17023 458 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 XRCC1P18887 633 aaPredicted RBP10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 PGCP20142 388 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 CHRNA4P43681 627 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 EEFSECP57772 596 aaKnown RBP10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 RPS14P62263 151 aaKnown RBP10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 ACSBG2Q5FVE4 666 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 ANKLE1Q8NAG6 615 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 OR11L1Q8NGX0 322 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 ZNF442Q9H7R0 627 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 VPS29Q9UBQ0 182 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 A0A0G2JMP0 313 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 KDELR3O43731 214 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 PAX6P26367 422 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 FAM180BQ6P0A1 224 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 PPP1R3BQ86XI6 285 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 SNX29P2Q8IUI4 249 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 OR4M2Q8NGB6 313 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 MUC13Q9H3R2 512 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 ST6GALNAC4Q9H4F1 302 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 TAS2R1Q9NYW7 299 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 MED11Q9P086 117 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 RCOR3Q9P2K3 495 aaPredicted RBP10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 LOC105369274A0A096LPK9 316 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 CENPBD1B2RD01 187 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 SERPINA7P05543 415 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 GRB2P62993 217 aaKnown RBP10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 RIPPLY1Q0D2K3 151 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 DYRK1AQ13627 763 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 ADGRD2Q7Z7M1 963 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 OR4N4Q8N0Y3 316 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 SLC44A3Q8N4M1 653 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 C1orf52Q8N6N3 182 aaKnown RBP10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 OR8K3Q8NH51 312 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 UFD1Q92890 307 aa10.51□□□□□ -0.73
CACNA1C-216ENST00000399638 LRRC4CQ9HCJ2 640 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms