RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 SLURP2P0DP57 97 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 CCL5P13501 91 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 PORP16435 677 aaPredicted RBP8□□□□□ -1.13
SPTLC3-201ENST00000399002 KDELR2P33947 212 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 DGKEP52429 567 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 LMAN2Q12907 356 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 KCNAB2Q13303 367 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 LASP1Q14847 261 aaKnown RBP8□□□□□ -1.13
SPTLC3-201ENST00000399002 FAM69AQ5T7M9 428 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 ZNF767PQ75MW2 155 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 RAB11FIP2Q7L804 512 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 ZNF283Q8N7M2 679 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 NPLOC4Q8TAT6 608 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 ZNF384Q8TF68 577 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 BORCS8Q96FH0 119 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 DHRS1Q96LJ7 313 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 ZNF700Q9H0M5 742 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 IGSF5Q9NSI5 407 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 KCTD3Q9Y597 815 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 NUBP2Q9Y5Y2 271 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 A6NIZ1 184 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 CSNK1DP48730 415 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 ART1P52961 327 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 RAP1BP61224 184 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 TBPL1P62380 186 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 RAP1AP62834 184 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 AIMP2Q13155 320 aaKnown RBP8□□□□□ -1.13
SPTLC3-201ENST00000399002 TDGQ13569 410 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 COL9A3Q14050 684 aaPredicted RBP8□□□□□ -1.13
SPTLC3-201ENST00000399002 GARNL3Q5VVW2 1013 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 TXNDC8Q6A555 127 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 CCSAPQ6IQ19 270 aaPredicted RBP8□□□□□ -1.13
SPTLC3-201ENST00000399002 WDR53Q7Z5U6 358 aaPredicted RBP8□□□□□ -1.13
SPTLC3-201ENST00000399002 Q8N402 240 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 SAMD12Q8N8I0 201 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 TMEM41AQ96HV5 264 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 HYLS1Q96M11 299 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 NPLQ9BXD5 320 aaPredicted RBP8□□□□□ -1.13
SPTLC3-201ENST00000399002 ACTRT3Q9BYD9 372 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 ATG5Q9H1Y0 275 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 XKR8Q9H6D3 395 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 ERVK-18Q9QC07 812 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 C13orf42A0A1B0GVH6 325 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 TRIM64A6NGJ6 449 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 SLC33A1O00400 549 aaPredicted RBP8□□□□□ -1.13
SPTLC3-201ENST00000399002 RNH1P13489 461 aaKnown RBP8□□□□□ -1.13
SPTLC3-201ENST00000399002 OSMP13725 252 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 VAMP1P23763 118 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 MLLT1Q03111 559 aaPredicted RBP8□□□□□ -1.13
SPTLC3-201ENST00000399002 MICAQ29983 383 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 AMZ1Q400G9 498 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 LCTLQ6UWM7 567 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 CEACAM19Q7Z692 300 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 DNAJC22Q8N4W6 341 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 TANKQ92844 425 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 P2RY13Q9BPV8 354 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 SLC6A16Q9GZN6 736 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 MTHFD2LQ9H903 347 aaPredicted RBP8□□□□□ -1.13
SPTLC3-201ENST00000399002 FARSAQ9Y285 508 aaKnown RBP8□□□□□ -1.13
SPTLC3-201ENST00000399002 H7C2Y5 167 aa7.99□□□□□ -1.13
SPTLC3-201ENST00000399002 I3L521 148 aa7.99□□□□□ -1.13
SPTLC3-201ENST00000399002 SLC1A7O00341 560 aa7.99□□□□□ -1.13
SPTLC3-201ENST00000399002 SOX14O95416 240 aa7.99□□□□□ -1.13
SPTLC3-201ENST00000399002 CSN2P05814 226 aa7.99□□□□□ -1.13
SPTLC3-201ENST00000399002 C5AR1P21730 350 aa7.99□□□□□ -1.13
SPTLC3-201ENST00000399002 RORAP35398 523 aa7.99□□□□□ -1.13
SPTLC3-201ENST00000399002 MAGEA6P43360 314 aa7.99□□□□□ -1.13
SPTLC3-201ENST00000399002 AGTR2P50052 363 aa7.99□□□□□ -1.13
SPTLC3-201ENST00000399002 RPL6Q02878 288 aaKnown RBP7.99□□□□□ -1.13
SPTLC3-201ENST00000399002 CCL14Q16627 93 aa7.99□□□□□ -1.13
SPTLC3-201ENST00000399002 TCTE1Q5JU00 501 aa7.99□□□□□ -1.13
SPTLC3-201ENST00000399002 MRPL10Q7Z7H8 261 aaKnown RBP7.99□□□□□ -1.13
SPTLC3-201ENST00000399002 CCDC71LQ8N9Z2 235 aa7.99□□□□□ -1.13
SPTLC3-201ENST00000399002 OR9I1Q8NGQ6 314 aa7.99□□□□□ -1.13
SPTLC3-201ENST00000399002 KLK6Q92876 244 aa7.99□□□□□ -1.13
SPTLC3-201ENST00000399002 OR4K3Q96R72 315 aa7.99□□□□□ -1.13
SPTLC3-201ENST00000399002 SLC12A9Q9BXP2 914 aa7.99□□□□□ -1.13
SPTLC3-201ENST00000399002 RNF39Q9H2S5 420 aa7.99□□□□□ -1.13
SPTLC3-201ENST00000399002 PPP4R1LQ9P1A2 415 aa7.99□□□□□ -1.13
SPTLC3-201ENST00000399002 PCTPQ9UKL6 214 aa7.99□□□□□ -1.13
SPTLC3-201ENST00000399002 ADAMTS6Q9UKP5 1117 aa7.99□□□□□ -1.13
SPTLC3-201ENST00000399002 TMEM98Q9Y2Y6 226 aa7.99□□□□□ -1.13
SPTLC3-201ENST00000399002 PRKAB1Q9Y478 270 aa7.99□□□□□ -1.13
SPTLC3-201ENST00000399002 IGKV6D-21A0A0A0MT36 114 aa7.99□□□□□ -1.13
SPTLC3-201ENST00000399002 A0A0G2JMP0 313 aa7.99□□□□□ -1.13
SPTLC3-201ENST00000399002 TRAPPC13A5PLN9 417 aa7.99□□□□□ -1.13
SPTLC3-201ENST00000399002 GRXCR1A8MXD5 290 aa7.99□□□□□ -1.13
SPTLC3-201ENST00000399002 CREBL2O60519 120 aaPredicted RBP7.99□□□□□ -1.13
SPTLC3-201ENST00000399002 PRAMEF2O60811 474 aa7.99□□□□□ -1.13
SPTLC3-201ENST00000399002 LEFTY1O75610 366 aa7.99□□□□□ -1.13
SPTLC3-201ENST00000399002 CSTAP01040 98 aa7.99□□□□□ -1.13
SPTLC3-201ENST00000399002 SPARCP09486 303 aa7.99□□□□□ -1.13
SPTLC3-201ENST00000399002 ZNF806P0C7X5 589 aa7.99□□□□□ -1.13
SPTLC3-201ENST00000399002 GABRA3P34903 492 aa7.99□□□□□ -1.13
SPTLC3-201ENST00000399002 CYCSP99999 105 aaKnown RBP7.99□□□□□ -1.13
SPTLC3-201ENST00000399002 TLE3Q04726 772 aa7.99□□□□□ -1.13
SPTLC3-201ENST00000399002 SLAMF1Q13291 335 aa7.99□□□□□ -1.13
SPTLC3-201ENST00000399002 VEZF1Q14119 521 aa7.99□□□□□ -1.13
SPTLC3-201ENST00000399002 COL28A1Q2UY09 1125 aa7.99□□□□□ -1.13
SPTLC3-201ENST00000399002 PHF19Q5T6S3 580 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms