RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 FCHO2Q0JRZ9 810 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 ZMYND11Q15326 602 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 PRSS53Q2L4Q9 553 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 KLHL12Q53G59 568 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 PDZK1Q5T2W1 519 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 TMPRSS11AQ6ZMR5 421 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 SERPINA11Q86U17 422 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 TEX47Q8TBZ9 253 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 ADAMTS15Q8TE58 950 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 SAMD11Q96NU1 681 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 TMEM106CQ9BVX2 250 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 GABARAPL1Q9H0R8 117 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 SNX11Q9Y5W9 270 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 RP1L1Q8IWN7 2480 aaPredicted RBP4.7□□□□□ -1.66
SMAD4-202ENST00000398417 QSER1Q2KHR3 1735 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 NRXN2Q9P2S2 1712 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 ABHD14A-ACY1A0A1B0GW23 586 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 TSPAN4O14817 238 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 CDK1P06493 297 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 SYN1P17600 705 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 BTN3A2P78410 334 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 DMPKQ09013 629 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 TMEM53Q6P2H8 277 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 PLEKHG7Q6ZR37 379 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 OR4N5Q8IXE1 308 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 CELF5Q8N6W0 485 aaKnown RBP4.7□□□□□ -1.66
SMAD4-202ENST00000398417 WFIKKN2Q8TEU8 576 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 CHTF18Q8WVB6 975 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 GEMIN6Q8WXD5 167 aaKnown RBP4.7□□□□□ -1.66
SMAD4-202ENST00000398417 INSM2Q96T92 566 aaPredicted RBP4.7□□□□□ -1.66
SMAD4-202ENST00000398417 DPCDQ9BVM2 203 aaPredicted RBP4.7□□□□□ -1.66
SMAD4-202ENST00000398417 CPEB1Q9BZB8 566 aaKnown RBP4.7□□□□□ -1.66
SMAD4-202ENST00000398417 AKIP1Q9NQ31 210 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 KLHL1Q9NR64 748 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 KLHL28Q9NXS3 571 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 TUBD1Q9UJT1 453 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 ENTPD4Q9Y227 616 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 RPL36Q9Y3U8 105 aaKnown RBP4.7□□□□□ -1.66
SMAD4-202ENST00000398417 AGAP5A6NIR3 686 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 CASKO14936 926 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 ERI3O43414 337 aaKnown RBP4.7□□□□□ -1.66
SMAD4-202ENST00000398417 ECDO95905 644 aaPredicted RBP4.7□□□□□ -1.66
SMAD4-202ENST00000398417 PORP16435 677 aaPredicted RBP4.7□□□□□ -1.66
SMAD4-202ENST00000398417 HOXB6P17509 224 aaKnown RBP4.7□□□□□ -1.66
SMAD4-202ENST00000398417 PPP2R1BP30154 601 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 NRG3P56975 720 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 CLEC12AQ5QGZ9 265 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 C6orf120Q7Z4R8 191 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 TSPYL5Q86VY4 417 aaPredicted RBP4.7□□□□□ -1.66
SMAD4-202ENST00000398417 NUDT13Q86X67 352 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 SLC7A5P1Q8MH63 180 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 TMEM145Q8NBT3 493 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 RHOXF1Q8NHV9 184 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 POF1BQ8WVV4 589 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 NXPE3Q969Y0 559 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 FCRL4Q96PJ5 515 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 ZNF607Q96SK3 696 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 C17orf62Q9BQA9 187 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 MROQ9BYG7 248 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 PRRG4Q9BZD6 226 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 ZBP1Q9H171 429 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 TBC1D17Q9HA65 648 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 SPATA7Q9P0W8 599 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 CARD8Q9Y2G2 431 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 ENPP4Q9Y6X5 453 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 METTL15A6NJ78 407 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 PCDHGA12O60330 932 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 MAGEA10P43363 369 aaPredicted RBP4.69□□□□□ -1.66
SMAD4-202ENST00000398417 ANXA11P50995 505 aaKnown RBP4.69□□□□□ -1.66
SMAD4-202ENST00000398417 CSNK2BP67870 215 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 LRRC32Q14392 662 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 PAQR6Q6TCH4 344 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 ZNF557Q8N988 423 aaPredicted RBP4.69□□□□□ -1.66
SMAD4-202ENST00000398417 MINDY2Q8NBR6 621 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 OR5D16Q8NGK9 328 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 OR8K5Q8NH50 307 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 OR56A3Q8NH54 315 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 POP5Q969H6 163 aaKnown RBP4.69□□□□□ -1.66
SMAD4-202ENST00000398417 HDHD2Q9H0R4 259 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 GULP1Q9UBP9 304 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 MGAT4BQ9UQ53 548 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 POLEQ07864 2286 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 SLC5A10A0PJK1 596 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 M0R082 166 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 NRG2O14511 850 aaPredicted RBP4.69□□□□□ -1.66
SMAD4-202ENST00000398417 PTX3P26022 381 aaPredicted RBP4.69□□□□□ -1.66
SMAD4-202ENST00000398417 HNRNPA0Q13151 305 aaKnown RBP4.69□□□□□ -1.66
SMAD4-202ENST00000398417 C1DQ13901 141 aaKnown RBP4.69□□□□□ -1.66
SMAD4-202ENST00000398417 QPRTQ15274 297 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 ZXDCQ2QGD7 858 aaPredicted RBP4.69□□□□□ -1.66
SMAD4-202ENST00000398417 EIF2S3LQ2VIR3 472 aaKnown RBP4.69□□□□□ -1.66
SMAD4-202ENST00000398417 TIMM50Q3ZCQ8 353 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 DESI1Q6ICB0 168 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 PNCKQ6P2M8 343 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 VITQ6UXI7 678 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 C10orf53Q8N6V4 93 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 RPLP0P6Q8NHW5 317 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 C9orf43Q8TAL5 461 aaPredicted RBP4.69□□□□□ -1.66
SMAD4-202ENST00000398417 BPIFA2Q96DR5 249 aa4.69□□□□□ -1.66
SMAD4-202ENST00000398417 CLEC4MQ9H2X3 399 aaPredicted RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms