RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 ZFP14Q9HCL3 533 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 ABCC13Q9NSE7 274 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 RIC8BQ9NVN3 520 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 B3GNT2Q9NY97 397 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 GTSE1Q9NYZ3 720 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 PISDQ9UG56 409 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 RAPGEFL1Q9UHV5 662 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 UBQLN1Q9UMX0 589 aaKnown RBP6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 ABCG2Q9UNQ0 655 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 SLC5A6Q9Y289 635 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 POLR3HQ9Y535 204 aaPredicted RBP6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 AP4S1Q9Y587 144 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 TRIP11Q15643 1979 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 H3BMM5 538 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 CYR61O00622 381 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 STX16O14662 325 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 ARPC5O15511 151 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 NADKO95544 446 aaPredicted RBP6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 MT-ND2P03891 347 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 CCL2P13500 99 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 TFE3P19532 575 aaPredicted RBP6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 PCSK6P29122 969 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 PAFAH1B3Q15102 231 aaKnown RBP6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 TYW3Q6IPR3 259 aaKnown RBP6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 NAPRTQ6XQN6 538 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 LRRC70Q7Z2Q7 622 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 PIWIL4Q7Z3Z4 852 aaKnown RBP6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 REC114Q7Z4M0 266 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 CLEC14AQ86T13 490 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 SPATA6LQ8N4H0 392 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 WDSUB1Q8N9V3 476 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 GPRC5AQ8NFJ5 357 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 TSPAN14Q8NG11 270 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 TBC1D15Q8TC07 691 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 MAPK15Q8TD08 544 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 CCDC126Q96EE4 140 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 WDR77Q9BQA1 342 aaPredicted RBP6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 ZBTB26Q9HCK0 441 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 SLCO1C1Q9NYB5 712 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 RIMS3Q9UJD0 308 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 ZNF225Q9UK10 706 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 MYRFQ9Y2G1 1151 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 CITO14578 2027 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 ASB14A6NK59 587 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 LGALS8O00214 317 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 ITGA10O75578 1167 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 VTNP04004 478 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 CHRNGP07510 517 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 GIMD1P0DJR0 217 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 RNH1P13489 461 aaKnown RBP6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 CCND3P30281 292 aaPredicted RBP6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 MAGEA2P43356 314 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 EMP2P54851 167 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 CDH13P55290 713 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 GAGE1Q13065 139 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 OR2B11Q5JQS5 317 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 DCST1Q5T197 706 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 KHDRBS2Q5VWX1 349 aaKnown RBP6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 CLEC9AQ6UXN8 241 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 USP30Q70CQ3 517 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 FBXO16Q8IX29 292 aaPredicted RBP6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 KDM8Q8N371 416 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 RNF148Q8N7C7 305 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 CLRN3Q8NCR9 226 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 LRTOMTQ8WZ04 291 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 ASB9Q96DX5 294 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 FBXO17Q96EF6 278 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 MAGEB10Q96LZ2 347 aaPredicted RBP6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 FOXN4Q96NZ1 517 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 MED18Q9BUE0 208 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 NPLQ9BXD5 320 aaPredicted RBP6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 MRPL15Q9P015 296 aaKnown RBP6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 GMPR2Q9P2T1 348 aaKnown RBP6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 UGT2A1Q9Y4X1 527 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 WIF1Q9Y5W5 379 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 CEP290O15078 2479 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 ANK1P16157 1881 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 TANC1Q9C0D5 1861 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 SLC5A10A0PJK1 596 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 AQP12BA6NM10 295 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 PRKCGP05129 697 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 THP07101 528 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 JUNDP17535 347 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 ARRB2P32121 409 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 LIMS1P48059 325 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 GLRBP48167 497 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 SLC5A3P53794 718 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 NUTF2P61970 127 aaKnown RBP6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 SIM1P81133 766 aaPredicted RBP6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 CDC42EP1Q00587 391 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 IRF9Q00978 393 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 EGR3Q06889 387 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 ADIGQ0VDE8 80 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 MAB21L1Q13394 359 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 GANABQ14697 944 aaKnown RBP6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 DLG2Q15700 870 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 C6orf52Q5T4I8 152 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 OGFOD2Q6N063 350 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 FAM92BQ6ZTR7 304 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 LRRC18Q8N456 261 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms