RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 CLEC4EQ9ULY5 219 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 SAGE2PA6NJ88 616 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 RAD51DO75771 328 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 ITGB8P26012 769 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 CNEP1R1Q8N9A8 125 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 CWH43Q9H720 699 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 TMEM5Q9Y2B1 443 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 C17orf105B2RV13 164 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 TM4SF4P48230 202 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 ZNF33BQ06732 778 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 NDUFAF5Q5TEU4 345 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 PROKR1Q8TCW9 393 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 TSPAN9O75954 239 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 S100A9P06702 114 aaKnown RBP10.84□□□□□ -0.67
TTC28-201ENST00000397906 C3orf33Q6P1S2 294 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 OR52B6Q8NGF0 335 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 TAS2R1Q9NYW7 299 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 LDB3O75112 727 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 RDH16O75452 317 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 ARSDP51689 593 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 PLGLAQ15195 96 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 RAB11FIP2Q7L804 512 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 ZNF778Q96MU6 729 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 MROQ9BYG7 248 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 POPDC3Q9HBV1 291 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 IL20RAQ9UHF4 553 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 HCFC2Q9Y5Z7 792 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 MT-ND5P03915 603 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 CD79AP11912 226 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 GMPRP36959 345 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 TMEM35AQ53FP2 167 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 C6orf120Q7Z4R8 191 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 PAQR7Q86WK9 346 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 TIGD4Q8IY51 512 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 DEFB123Q8N688 67 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 IL17RCQ8NAC3 791 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 THAP4Q8WY91 577 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 TCHHQ07283 1943 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 SLC16A8O95907 504 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 CBLBQ13191 982 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 MLC1Q15049 377 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 OR52E8Q6IFG1 317 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 ELP5Q8TE02 316 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 FRS2Q8WU20 508 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 FBXL20Q96IG2 436 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 SLC39A1Q9NY26 324 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 EPHA6Q9UF33 1036 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 NUFIP1Q9UHK0 495 aaKnown RBP10.84□□□□□ -0.67
TTC28-201ENST00000397906 ZNF451Q9Y4E5 1061 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 ABOP16442 354 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 SLC6A4P31645 630 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 WNT7BP56706 349 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 LINC00471Q8N535 108 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 OR2L2Q8NH16 312 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 SHISA4Q96DD7 197 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 SCML1Q9UN30 329 aa10.84□□□□□ -0.67
TTC28-201ENST00000397906 TIMM8BQ9Y5J9 83 aaPredicted RBP10.84□□□□□ -0.67
TTC28-201ENST00000397906 AQP12BA6NM10 295 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 CDRT1O95170 752 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 C3orf38Q5JPI3 329 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 AQP12AQ8IXF9 295 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 CASTOR1Q8WTX7 329 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 DHDHQ9UQ10 334 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 NFS1Q9Y697 457 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 EFCAB7A8K855 629 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 LEPRP48357 1165 aaKnown RBP10.83□□□□□ -0.68
TTC28-201ENST00000397906 POU3F4P49335 361 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 FXYD6P3P58550 94 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 CHRFAM7AQ494W8 412 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 TCTE1Q5JU00 501 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 SIGLEC10Q96LC7 697 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 ZNF285Q96NJ3 590 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 ITPAQ9BY32 194 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 TTYH1Q9H313 450 aaPredicted RBP10.83□□□□□ -0.68
TTC28-201ENST00000397906 M0QZQ0 153 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 ORC5O43913 435 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 TCEAL8Q8IYN2 117 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 MRPL43Q8N983 215 aaKnown RBP10.83□□□□□ -0.68
TTC28-201ENST00000397906 DTX3Q8N9I9 347 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 LRIT1Q9P2V4 623 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 ICKQ9UPZ9 632 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 GPR37L1O60883 481 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 GJB3O75712 270 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 IL4RP24394 825 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 GDF1P27539 372 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 FCGR1BQ92637 280 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 MAPKAP1Q9BPZ7 522 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 ISPDA4D126 451 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 CDC14CA4D256 554 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 F10P00742 488 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 S100A6P06703 90 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 C6orf136Q5SQH8 315 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 OR2T33Q8NG76 320 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 CCDC107Q8WV48 283 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 RBM24Q9BX46 236 aaKnown RBP10.83□□□□□ -0.68
TTC28-201ENST00000397906 SLC6A15Q9H2J7 730 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 FBRSQ9HAH7 460 aa10.83□□□□□ -0.68
TTC28-201ENST00000397906 MAPK3P27361 379 aaPredicted RBP10.83□□□□□ -0.68
TTC28-201ENST00000397906 ARF3P61204 181 aaPredicted RBP10.83□□□□□ -0.68
TTC28-201ENST00000397906 ARF1P84077 181 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms