RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 OR52E1Q8NGJ3 308 aa9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 OR5K2Q8NHB8 316 aa9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 SETD7Q8WTS6 366 aaKnown RBP9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 TBX5Q99593 518 aa9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 TREX2Q9BQ50 279 aaPredicted RBP9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 DUSP21Q9H596 190 aa9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 DDX28Q9NUL7 540 aaKnown RBP9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 ACER3Q9NUN7 267 aa9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 FAIMQ9NVQ4 179 aa9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 GIN1Q9NXP7 522 aa9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 SPHK1Q9NYA1 384 aa9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 CNIH4Q9P003 139 aa9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 P2RX2Q9UBL9 471 aa9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 MALT1Q9UDY8 824 aa9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 LRRC72A6NJI9 287 aa9.9□□□□□ -0.83
CPSF1P1-201ENST00000397477 SPINT1O43278 529 aa9.9□□□□□ -0.83
CPSF1P1-201ENST00000397477 MED26O95402 600 aa9.9□□□□□ -0.83
CPSF1P1-201ENST00000397477 NTN1O95631 604 aa9.9□□□□□ -0.83
CPSF1P1-201ENST00000397477 TSPAN19P0C672 248 aa9.9□□□□□ -0.83
CPSF1P1-201ENST00000397477 ARAFP10398 606 aa9.9□□□□□ -0.83
CPSF1P1-201ENST00000397477 POLR2CP19387 275 aaPredicted RBP9.9□□□□□ -0.83
CPSF1P1-201ENST00000397477 PIK3CBP42338 1070 aa9.9□□□□□ -0.83
CPSF1P1-201ENST00000397477 MAGEA10P43363 369 aaPredicted RBP9.9□□□□□ -0.83
CPSF1P1-201ENST00000397477 HTRA4P83105 476 aaPredicted RBP9.9□□□□□ -0.83
CPSF1P1-201ENST00000397477 KCNC4Q03721 635 aa9.9□□□□□ -0.83
CPSF1P1-201ENST00000397477 RBBP4Q09028 425 aa9.9□□□□□ -0.83
CPSF1P1-201ENST00000397477 GINS1Q14691 196 aa9.9□□□□□ -0.83
CPSF1P1-201ENST00000397477 LTB4RQ15722 352 aa9.9□□□□□ -0.83
CPSF1P1-201ENST00000397477 ZC3H12BQ5HYM0 836 aaKnown RBP9.9□□□□□ -0.83
CPSF1P1-201ENST00000397477 B3GLCTQ6Y288 498 aa9.9□□□□□ -0.83
CPSF1P1-201ENST00000397477 USP30Q70CQ3 517 aa9.9□□□□□ -0.83
CPSF1P1-201ENST00000397477 GATAD2AQ86YP4 633 aa9.9□□□□□ -0.83
CPSF1P1-201ENST00000397477 CLIP3Q96DZ5 547 aa9.9□□□□□ -0.83
CPSF1P1-201ENST00000397477 HRASLS5Q96KN8 279 aa9.9□□□□□ -0.83
CPSF1P1-201ENST00000397477 YIPF2Q9BWQ6 316 aa9.9□□□□□ -0.83
CPSF1P1-201ENST00000397477 CLEC2DQ9UHP7 191 aa9.9□□□□□ -0.83
CPSF1P1-201ENST00000397477 CDH7Q9ULB5 785 aa9.9□□□□□ -0.83
CPSF1P1-201ENST00000397477 CARD8Q9Y2G2 431 aa9.9□□□□□ -0.83
CPSF1P1-201ENST00000397477 MICAL3Q7RTP6 2002 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 PDE9AO76083 593 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 RHCEP18577 417 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 PCMT1P22061 227 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 MC3RP41968 323 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 RGS8P57771 180 aaPredicted RBP9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 C1DQ13901 141 aaKnown RBP9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 ZNF311Q5JNZ3 666 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 TPRG1LQ5T0D9 272 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 FRMPD2BQ6IN97 320 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 KIAA1161Q6NSJ0 714 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 LCTLQ6UWM7 567 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 VN1R5Q7Z5H4 357 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 DNAJC22Q8N4W6 341 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 OR9A2Q8NGT5 310 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 POP5Q969H6 163 aaKnown RBP9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 CFHR5Q9BXR6 569 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 MS4A8Q9BY19 250 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 MKRN2Q9H000 416 aaKnown RBP9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 SLC35C2Q9NQQ7 365 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 H2AFY2Q9P0M6 372 aaPredicted RBP9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 ATG4BQ9Y4P1 393 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 KIAA0513O60268 411 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 RNGTTO60942 597 aaKnown RBP9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 SNX4O95219 450 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 RAB28P51157 221 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 BCAP31P51572 246 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 LIM2P55344 173 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 EIF4HQ15056 248 aaKnown RBP9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 BCL7AQ4VC05 210 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 C6orf132Q5T0Z8 1188 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 PPP2R2DQ66LE6 453 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 KIAA1211LQ6NV74 962 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 FBXO46Q6PJ61 603 aaPredicted RBP9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 PAQR6Q6TCH4 344 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 UNC5DQ6UXZ4 953 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 LACC1Q8IV20 430 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 KBTBD8Q8NFY9 601 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 CCL4L1Q8NHW4 92 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 S100ZQ8WXG8 99 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 SLC17A9Q9BYT1 436 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 PLA2G2FQ9BZM2 168 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 CRISPLD2Q9H0B8 497 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 SRMSQ9H3Y6 488 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 DSN1Q9H410 356 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 SLC28A3Q9HAS3 691 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 ERVK13-1Q9NX77 482 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 MARK1Q9P0L2 795 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 GPR34Q9UPC5 381 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 PADI2Q9Y2J8 665 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 FRMPD3Q5JV73 1810 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 CACNA1CQ13936 2221 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 PRAMEF25A6NGN4 478 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 TRIM64CA6NLI5 447 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 LOC110117498-PIK3R3F6TDL0 507 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 HAT1O14929 419 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 HOXC11O43248 304 aaPredicted RBP9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 APOA1P02647 267 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 HOXB2P14652 356 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 HOXB6P17509 224 aaKnown RBP9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 MYL12AP19105 171 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 ACADLP28330 430 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms