RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 RAP2CQ9Y3L5 183 aa23.62■■□□□ 1.37
TSPAN4-207ENST00000397411 CCL27Q9Y4X3 112 aa23.62■■□□□ 1.37
TSPAN4-207ENST00000397411 TRAV17A0A0B4J275 112 aa23.61■■□□□ 1.37
TSPAN4-207ENST00000397411 GABRR3A8MPY1 467 aa23.61■■□□□ 1.37
TSPAN4-207ENST00000397411 SKAP2O75563 359 aaPredicted RBP23.61■■□□□ 1.37
TSPAN4-207ENST00000397411 PRPH2P23942 346 aa23.61■■□□□ 1.37
TSPAN4-207ENST00000397411 GALNSP34059 522 aa23.61■■□□□ 1.37
TSPAN4-207ENST00000397411 MLLT10P55197 1068 aa23.61■■□□□ 1.37
TSPAN4-207ENST00000397411 MLF1P58340 268 aa23.61■■□□□ 1.37
TSPAN4-207ENST00000397411 ERVK-8P63133 956 aa23.61■■□□□ 1.37
TSPAN4-207ENST00000397411 DGAT2L6Q6ZPD8 337 aa23.61■■□□□ 1.37
TSPAN4-207ENST00000397411 KIRREL3Q8IZU9 778 aa23.61■■□□□ 1.37
TSPAN4-207ENST00000397411 ZNF321PQ8N8H1 164 aa23.61■■□□□ 1.37
TSPAN4-207ENST00000397411 OR2T11Q8NH01 316 aa23.61■■□□□ 1.37
TSPAN4-207ENST00000397411 EXOSC8Q96B26 276 aaKnown RBP23.61■■□□□ 1.37
TSPAN4-207ENST00000397411 PPP3R2Q96LZ3 170 aa23.61■■□□□ 1.37
TSPAN4-207ENST00000397411 ANKRD10Q9NXR5 420 aa23.61■■□□□ 1.37
TSPAN4-207ENST00000397411 HEY2Q9UBP5 337 aa23.61■■□□□ 1.37
TSPAN4-207ENST00000397411 CES1P1Q9UKY3 287 aa23.61■■□□□ 1.37
TSPAN4-207ENST00000397411 ERVK-19Q9WJR5 959 aa23.61■■□□□ 1.37
TSPAN4-207ENST00000397411 WBP11Q9Y2W2 641 aaKnown RBP23.61■■□□□ 1.37
TSPAN4-207ENST00000397411 MAN1A2O60476 641 aa23.6■■□□□ 1.37
TSPAN4-207ENST00000397411 ST13P50502 369 aaKnown RBP23.6■■□□□ 1.37
TSPAN4-207ENST00000397411 TLE1Q04724 770 aa23.6■■□□□ 1.37
TSPAN4-207ENST00000397411 ZNF750Q32MQ0 723 aa23.6■■□□□ 1.37
TSPAN4-207ENST00000397411 CES4AQ5XG92 561 aa23.6■■□□□ 1.37
TSPAN4-207ENST00000397411 ATG16L1Q676U5 607 aa23.6■■□□□ 1.37
TSPAN4-207ENST00000397411 HORMAD2Q8N7B1 307 aa23.6■■□□□ 1.37
TSPAN4-207ENST00000397411 ZNF721Q8TF20 911 aa23.6■■□□□ 1.37
TSPAN4-207ENST00000397411 C11orf24Q96F05 449 aaPredicted RBP23.6■■□□□ 1.37
TSPAN4-207ENST00000397411 FBXL20Q96IG2 436 aa23.6■■□□□ 1.37
TSPAN4-207ENST00000397411 NPAS2Q99743 824 aa23.6■■□□□ 1.37
TSPAN4-207ENST00000397411 ACBD3Q9H3P7 528 aa23.6■■□□□ 1.37
TSPAN4-207ENST00000397411 MIEF1Q9NQG6 463 aa23.6■■□□□ 1.37
TSPAN4-207ENST00000397411 ZNF223Q9UK11 482 aaPredicted RBP23.6■■□□□ 1.37
TSPAN4-207ENST00000397411 ENTPD4Q9Y227 616 aa23.6■■□□□ 1.37
TSPAN4-207ENST00000397411 PEX11AO75192 247 aa23.59■■□□□ 1.37
TSPAN4-207ENST00000397411 TNFSF10P50591 281 aa23.59■■□□□ 1.37
TSPAN4-207ENST00000397411 RPL14P50914 215 aaKnown RBP23.59■■□□□ 1.37
TSPAN4-207ENST00000397411 RPL38P63173 70 aaKnown RBP23.59■■□□□ 1.37
TSPAN4-207ENST00000397411 BST1Q10588 318 aa23.59■■□□□ 1.37
TSPAN4-207ENST00000397411 ATP6AP1LQ52LC2 224 aa23.59■■□□□ 1.37
TSPAN4-207ENST00000397411 GALNT12Q8IXK2 581 aa23.59■■□□□ 1.37
TSPAN4-207ENST00000397411 SAMD14Q8IZD0 417 aaPredicted RBP23.59■■□□□ 1.37
TSPAN4-207ENST00000397411 TMEM156Q8N614 296 aa23.59■■□□□ 1.37
TSPAN4-207ENST00000397411 ZNF781Q8N8C0 355 aa23.59■■□□□ 1.37
TSPAN4-207ENST00000397411 TRIM4Q9C037 500 aa23.59■■□□□ 1.37
TSPAN4-207ENST00000397411 BRINP2Q9C0B6 783 aa23.59■■□□□ 1.37
TSPAN4-207ENST00000397411 LIN28AQ9H9Z2 209 aaKnown RBP23.59■■□□□ 1.37
TSPAN4-207ENST00000397411 MYNNQ9NPC7 610 aa23.59■■□□□ 1.37
TSPAN4-207ENST00000397411 TMED5Q9Y3A6 229 aa23.59■■□□□ 1.37
TSPAN4-207ENST00000397411 ATP6AP2A0A1C7CYW4 349 aa23.58■■□□□ 1.37
TSPAN4-207ENST00000397411 A0A1W2PS29 197 aa23.58■■□□□ 1.37
TSPAN4-207ENST00000397411 NPIPB8E9PQR5 432 aa23.58■■□□□ 1.37
TSPAN4-207ENST00000397411 LSM1O15116 133 aaKnown RBP23.58■■□□□ 1.37
TSPAN4-207ENST00000397411 ATP6AP2O75787 350 aa23.58■■□□□ 1.37
TSPAN4-207ENST00000397411 MAPK1P28482 360 aa23.58■■□□□ 1.37
TSPAN4-207ENST00000397411 CD96P40200 585 aa23.58■■□□□ 1.37
TSPAN4-207ENST00000397411 RNF4P78317 190 aa23.58■■□□□ 1.37
TSPAN4-207ENST00000397411 TUBA3CQ13748 450 aa23.58■■□□□ 1.37
TSPAN4-207ENST00000397411 KIAA0040Q15053 153 aa23.58■■□□□ 1.37
TSPAN4-207ENST00000397411 SPRED3Q2MJR0 410 aa23.58■■□□□ 1.37
TSPAN4-207ENST00000397411 TUBA3EQ6PEY2 450 aa23.58■■□□□ 1.37
TSPAN4-207ENST00000397411 RNF111Q6ZNA4 994 aa23.58■■□□□ 1.37
TSPAN4-207ENST00000397411 CISD2Q8N5K1 135 aaKnown RBP23.58■■□□□ 1.37
TSPAN4-207ENST00000397411 Q8NA96 180 aa23.58■■□□□ 1.37
TSPAN4-207ENST00000397411 OR8K3Q8NH51 312 aa23.58■■□□□ 1.37
TSPAN4-207ENST00000397411 CPT1CQ8TCG5 803 aa23.58■■□□□ 1.37
TSPAN4-207ENST00000397411 TUBGCP3Q96CW5 907 aa23.58■■□□□ 1.37
TSPAN4-207ENST00000397411 BBS4Q96RK4 519 aa23.58■■□□□ 1.37
TSPAN4-207ENST00000397411 MANSC1Q9H8J5 431 aa23.58■■□□□ 1.37
TSPAN4-207ENST00000397411 CXorf21Q9HAI6 301 aa23.58■■□□□ 1.37
TSPAN4-207ENST00000397411 YARS2Q9Y2Z4 477 aaKnown RBP23.58■■□□□ 1.37
TSPAN4-207ENST00000397411 HMGB1P1B2RPK0 211 aaPredicted RBP23.57■■□□□ 1.36
TSPAN4-207ENST00000397411 WWP2O00308 870 aa23.57■■□□□ 1.36
TSPAN4-207ENST00000397411 CDK2AP1O14519 115 aa23.57■■□□□ 1.36
TSPAN4-207ENST00000397411 PRKNO60260 465 aaPredicted RBP23.57■■□□□ 1.36
TSPAN4-207ENST00000397411 PRAMEF2O60811 474 aa23.57■■□□□ 1.36
TSPAN4-207ENST00000397411 ITGA10O75578 1167 aa23.57■■□□□ 1.36
TSPAN4-207ENST00000397411 SORBS2O94875 1100 aaKnown RBP23.57■■□□□ 1.36
TSPAN4-207ENST00000397411 PLA2G2AP14555 144 aa23.57■■□□□ 1.36
TSPAN4-207ENST00000397411 CD46P15529 392 aa23.57■■□□□ 1.36
TSPAN4-207ENST00000397411 DDCP20711 480 aa23.57■■□□□ 1.36
TSPAN4-207ENST00000397411 CYB561P49447 251 aa23.57■■□□□ 1.36
TSPAN4-207ENST00000397411 OR1C1Q15619 314 aa23.57■■□□□ 1.36
TSPAN4-207ENST00000397411 INPP5JQ15735 1006 aaPredicted RBP23.57■■□□□ 1.36
TSPAN4-207ENST00000397411 PDCD2Q16342 344 aaPredicted RBP23.57■■□□□ 1.36
TSPAN4-207ENST00000397411 RFTN2Q52LD8 501 aaPredicted RBP23.57■■□□□ 1.36
TSPAN4-207ENST00000397411 TTMPQ5BVD1 217 aa23.57■■□□□ 1.36
TSPAN4-207ENST00000397411 FAM180BQ6P0A1 224 aa23.57■■□□□ 1.36
TSPAN4-207ENST00000397411 IKBIPQ70UQ0 350 aa23.57■■□□□ 1.36
TSPAN4-207ENST00000397411 SLC29A4Q7RTT9 530 aa23.57■■□□□ 1.36
TSPAN4-207ENST00000397411 CCDC116Q8IYX3 515 aa23.57■■□□□ 1.36
TSPAN4-207ENST00000397411 LRRC25Q8N386 305 aaPredicted RBP23.57■■□□□ 1.36
TSPAN4-207ENST00000397411 C5orf34Q96MH7 638 aa23.57■■□□□ 1.36
TSPAN4-207ENST00000397411 SLC35C2Q9NQQ7 365 aa23.57■■□□□ 1.36
TSPAN4-207ENST00000397411 THAP1Q9NVV9 213 aa23.57■■□□□ 1.36
TSPAN4-207ENST00000397411 EHD3Q9NZN3 535 aa23.57■■□□□ 1.36
TSPAN4-207ENST00000397411 LRFN1Q9P244 771 aa23.57■■□□□ 1.36
TSPAN4-207ENST00000397411 COPG1Q9Y678 874 aaKnown RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms