RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 ENTPD4Q9Y227 616 aa15.91■□□□□ 0.14
TSPAN4-205ENST00000397406 MRPS33Q9Y291 106 aaKnown RBP15.91■□□□□ 0.14
TSPAN4-205ENST00000397406 PCDHB14Q9Y5E9 798 aa15.91■□□□□ 0.14
TSPAN4-205ENST00000397406 RRP8O43159 456 aaKnown RBP15.9■□□□□ 0.14
TSPAN4-205ENST00000397406 LDB3O75112 727 aa15.9■□□□□ 0.14
TSPAN4-205ENST00000397406 CPNE3O75131 537 aaKnown RBP15.9■□□□□ 0.14
TSPAN4-205ENST00000397406 GSNP06396 782 aa15.9■□□□□ 0.14
TSPAN4-205ENST00000397406 FHP07954 510 aa15.9■□□□□ 0.14
TSPAN4-205ENST00000397406 ZCCHC18P0CG32 403 aa15.9■□□□□ 0.14
TSPAN4-205ENST00000397406 C8orf89P0DMQ9 161 aa15.9■□□□□ 0.14
TSPAN4-205ENST00000397406 SLC6A2P23975 617 aa15.9■□□□□ 0.14
TSPAN4-205ENST00000397406 NTSP30990 170 aa15.9■□□□□ 0.14
TSPAN4-205ENST00000397406 RAB15P59190 212 aa15.9■□□□□ 0.14
TSPAN4-205ENST00000397406 FOLH1Q04609 750 aa15.9■□□□□ 0.14
TSPAN4-205ENST00000397406 ERV3-1Q14264 604 aa15.9■□□□□ 0.14
TSPAN4-205ENST00000397406 ARHGAP40Q5TG30 622 aa15.9■□□□□ 0.14
TSPAN4-205ENST00000397406 LRRC69Q6ZNQ3 347 aa15.9■□□□□ 0.14
TSPAN4-205ENST00000397406 ZNF551Q7Z340 670 aaPredicted RBP15.9■□□□□ 0.14
TSPAN4-205ENST00000397406 OR4N5Q8IXE1 308 aa15.9■□□□□ 0.14
TSPAN4-205ENST00000397406 ZNF248Q8NDW4 579 aa15.9■□□□□ 0.14
TSPAN4-205ENST00000397406 OR4A15Q8NGL6 344 aa15.9■□□□□ 0.14
TSPAN4-205ENST00000397406 WDR36Q8NI36 951 aaKnown RBP15.9■□□□□ 0.14
TSPAN4-205ENST00000397406 ANKRD27Q96NW4 1050 aa15.9■□□□□ 0.14
TSPAN4-205ENST00000397406 PHF12Q96QT6 1004 aa15.9■□□□□ 0.14
TSPAN4-205ENST00000397406 BBS4Q96RK4 519 aa15.9■□□□□ 0.14
TSPAN4-205ENST00000397406 CPNE5Q9HCH3 593 aa15.9■□□□□ 0.14
TSPAN4-205ENST00000397406 LANCL2Q9NS86 450 aa15.9■□□□□ 0.14
TSPAN4-205ENST00000397406 TAS2R9Q9NYW1 312 aa15.9■□□□□ 0.14
TSPAN4-205ENST00000397406 TRPC4Q9UBN4 977 aa15.9■□□□□ 0.14
TSPAN4-205ENST00000397406 ZNF780BQ9Y6R6 833 aa15.9■□□□□ 0.14
TSPAN4-205ENST00000397406 PLD2O14939 933 aa15.89■□□□□ 0.13
TSPAN4-205ENST00000397406 JRKO75564 520 aa15.89■□□□□ 0.13
TSPAN4-205ENST00000397406 TNFSF15O95150 251 aa15.89■□□□□ 0.13
TSPAN4-205ENST00000397406 GPR75O95800 540 aa15.89■□□□□ 0.13
TSPAN4-205ENST00000397406 CSNK2A2P19784 350 aaPredicted RBP15.89■□□□□ 0.13
TSPAN4-205ENST00000397406 IL10P22301 178 aa15.89■□□□□ 0.13
TSPAN4-205ENST00000397406 FEN1P39748 380 aaKnown RBP15.89■□□□□ 0.13
TSPAN4-205ENST00000397406 XKP51811 444 aa15.89■□□□□ 0.13
TSPAN4-205ENST00000397406 MAPK10P53779 464 aa15.89■□□□□ 0.13
TSPAN4-205ENST00000397406 MANFP55145 182 aaKnown RBP15.89■□□□□ 0.13
TSPAN4-205ENST00000397406 KCNJ2P63252 427 aa15.89■□□□□ 0.13
TSPAN4-205ENST00000397406 ABHD18Q0P651 414 aa15.89■□□□□ 0.13
TSPAN4-205ENST00000397406 GAB1Q13480 694 aa15.89■□□□□ 0.13
TSPAN4-205ENST00000397406 NKAIN1Q4KMZ8 207 aa15.89■□□□□ 0.13
TSPAN4-205ENST00000397406 RUNDC3AQ59EK9 446 aa15.89■□□□□ 0.13
TSPAN4-205ENST00000397406 DCAF12Q5T6F0 453 aa15.89■□□□□ 0.13
TSPAN4-205ENST00000397406 NANOGP8Q6NSW7 305 aa15.89■□□□□ 0.13
TSPAN4-205ENST00000397406 ZC3H7AQ8IWR0 971 aaKnown RBP15.89■□□□□ 0.13
TSPAN4-205ENST00000397406 SAMD14Q8IZD0 417 aaPredicted RBP15.89■□□□□ 0.13
TSPAN4-205ENST00000397406 PSMA8Q8TAA3 256 aa15.89■□□□□ 0.13
TSPAN4-205ENST00000397406 UTP4Q969X6 686 aaKnown RBP15.89■□□□□ 0.13
TSPAN4-205ENST00000397406 TMEM125Q96AQ2 219 aa15.89■□□□□ 0.13
TSPAN4-205ENST00000397406 LRFN5Q96NI6 719 aa15.89■□□□□ 0.13
TSPAN4-205ENST00000397406 TAAR9Q96RI9 348 aa15.89■□□□□ 0.13
TSPAN4-205ENST00000397406 THTPAQ9BU02 230 aa15.89■□□□□ 0.13
TSPAN4-205ENST00000397406 DDA1Q9BW61 102 aa15.89■□□□□ 0.13
TSPAN4-205ENST00000397406 TRIM8Q9BZR9 551 aa15.89■□□□□ 0.13
TSPAN4-205ENST00000397406 NANOGQ9H9S0 305 aa15.89■□□□□ 0.13
TSPAN4-205ENST00000397406 MKKSQ9NPJ1 570 aaPredicted RBP15.89■□□□□ 0.13
TSPAN4-205ENST00000397406 SIRT3Q9NTG7 399 aaPredicted RBP15.89■□□□□ 0.13
TSPAN4-205ENST00000397406 GIMAP4Q9NUV9 329 aa15.89■□□□□ 0.13
TSPAN4-205ENST00000397406 TMEM181Q9P2C4 612 aa15.89■□□□□ 0.13
TSPAN4-205ENST00000397406 ABCD2Q9UBJ2 740 aa15.89■□□□□ 0.13
TSPAN4-205ENST00000397406 PISDQ9UG56 409 aa15.89■□□□□ 0.13
TSPAN4-205ENST00000397406 PRPF19Q9UMS4 504 aaKnown RBP15.89■□□□□ 0.13
TSPAN4-205ENST00000397406 PCDHGB4Q9UN71 923 aa15.89■□□□□ 0.13
TSPAN4-205ENST00000397406 CLDN16Q9Y5I7 305 aa15.89■□□□□ 0.13
TSPAN4-205ENST00000397406 B3GALT1Q9Y5Z6 326 aa15.89■□□□□ 0.13
TSPAN4-205ENST00000397406 IGLV3-12A0A075B6K2 115 aa15.88■□□□□ 0.13
TSPAN4-205ENST00000397406 TGFBR3LH3BV60 316 aa15.88■□□□□ 0.13
TSPAN4-205ENST00000397406 EFSO43281 561 aa15.88■□□□□ 0.13
TSPAN4-205ENST00000397406 B4GALT2O60909 372 aa15.88■□□□□ 0.13
TSPAN4-205ENST00000397406 CTNSO60931 367 aa15.88■□□□□ 0.13
TSPAN4-205ENST00000397406 CDC123O75794 336 aaPredicted RBP15.88■□□□□ 0.13
TSPAN4-205ENST00000397406 BMP10O95393 424 aa15.88■□□□□ 0.13
TSPAN4-205ENST00000397406 ANP32DO95626 131 aa15.88■□□□□ 0.13
TSPAN4-205ENST00000397406 PRB1P04280 392 aa15.88■□□□□ 0.13
TSPAN4-205ENST00000397406 ABCB1P08183 1280 aaPredicted RBP15.88■□□□□ 0.13
TSPAN4-205ENST00000397406 JMJD7P0C870 316 aa15.88■□□□□ 0.13
TSPAN4-205ENST00000397406 PPP2R1BP30154 601 aa15.88■□□□□ 0.13
TSPAN4-205ENST00000397406 CDK9P50750 372 aaKnown RBP15.88■□□□□ 0.13
TSPAN4-205ENST00000397406 NCBP2P52298 156 aaKnown RBP eCLIP15.88■□□□□ 0.131e-6■■■■□ 19.8
TSPAN4-205ENST00000397406 HSD17B7P56937 341 aa15.88■□□□□ 0.13
TSPAN4-205ENST00000397406 BTG2P78543 158 aa15.88■□□□□ 0.13
TSPAN4-205ENST00000397406 IGLV3-21P80748 117 aaPredicted RBP15.88■□□□□ 0.13
TSPAN4-205ENST00000397406 DCDP81605 110 aaKnown RBP15.88■□□□□ 0.13
TSPAN4-205ENST00000397406 ID2Q02363 134 aa15.88■□□□□ 0.13
TSPAN4-205ENST00000397406 HSPB3Q12988 150 aa15.88■□□□□ 0.13
TSPAN4-205ENST00000397406 BNC2Q6ZN30 1099 aaPredicted RBP15.88■□□□□ 0.13
TSPAN4-205ENST00000397406 SCUBE1Q8IWY4 988 aa15.88■□□□□ 0.13
TSPAN4-205ENST00000397406 SLC15A3Q8IY34 581 aa15.88■□□□□ 0.13
TSPAN4-205ENST00000397406 CCDC116Q8IYX3 515 aa15.88■□□□□ 0.13
TSPAN4-205ENST00000397406 ZFP28Q8NHY6 868 aa15.88■□□□□ 0.13
TSPAN4-205ENST00000397406 CDRT15Q96T59 188 aa15.88■□□□□ 0.13
TSPAN4-205ENST00000397406 CPPED1Q9BRF8 314 aaPredicted RBP15.88■□□□□ 0.13
TSPAN4-205ENST00000397406 ZPBPQ9BS86 351 aa15.88■□□□□ 0.13
TSPAN4-205ENST00000397406 YIPF2Q9BWQ6 316 aa15.88■□□□□ 0.13
TSPAN4-205ENST00000397406 CXorf36Q9H7Y0 433 aa15.88■□□□□ 0.13
TSPAN4-205ENST00000397406 NEUROD4Q9HD90 331 aa15.88■□□□□ 0.13
TSPAN4-205ENST00000397406 SPAG4Q9NPE6 437 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms