RNA–Protein interactions for RNA: ENST00000396858.5

GAPDH-203, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-203ENST00000396858 PTPN4P29074 926 aa13.21□□□□□ -0.29
GAPDH-203ENST00000396858 GPC1P35052 558 aa13.21□□□□□ -0.29
GAPDH-203ENST00000396858 MC3RP41968 323 aa13.21□□□□□ -0.29
GAPDH-203ENST00000396858 SLC7A2P52569 658 aa13.21□□□□□ -0.29
GAPDH-203ENST00000396858 HSD17B7P56937 341 aa13.21□□□□□ -0.29
GAPDH-203ENST00000396858 MTPNP58546 118 aa13.21□□□□□ -0.29
GAPDH-203ENST00000396858 PSME3P61289 254 aa13.21□□□□□ -0.29
GAPDH-203ENST00000396858 IGLV3-21P80748 117 aaPredicted RBP13.21□□□□□ -0.29
GAPDH-203ENST00000396858 STX4Q12846 297 aa13.21□□□□□ -0.29
GAPDH-203ENST00000396858 SELPLGQ14242 412 aa13.21□□□□□ -0.29
GAPDH-203ENST00000396858 NCF4Q15080 339 aa13.21□□□□□ -0.29
GAPDH-203ENST00000396858 NKG7Q16617 165 aa13.21□□□□□ -0.29
GAPDH-203ENST00000396858 SPDYE7PQ495Y7 208 aa13.21□□□□□ -0.29
GAPDH-203ENST00000396858 DNAL1Q4LDG9 190 aa13.21□□□□□ -0.29
GAPDH-203ENST00000396858 FAM69BQ5VUD6 431 aa13.21□□□□□ -0.29
GAPDH-203ENST00000396858 C8orf82Q6P1X6 216 aaPredicted RBP13.21□□□□□ -0.29
GAPDH-203ENST00000396858 TMEM107Q6UX40 140 aa13.21□□□□□ -0.29
GAPDH-203ENST00000396858 C6orf15Q6UXA7 325 aaPredicted RBP13.21□□□□□ -0.29
GAPDH-203ENST00000396858 OVCH1Q7RTY7 1134 aa13.21□□□□□ -0.29
GAPDH-203ENST00000396858 TIPARPQ7Z3E1 657 aaKnown RBP13.21□□□□□ -0.29
GAPDH-203ENST00000396858 CCDC116Q8IYX3 515 aa13.21□□□□□ -0.29
GAPDH-203ENST00000396858 SAMD14Q8IZD0 417 aaPredicted RBP13.21□□□□□ -0.29
GAPDH-203ENST00000396858 PGAM4Q8N0Y7 254 aa13.21□□□□□ -0.29
GAPDH-203ENST00000396858 NATD1Q8N6N6 113 aa13.21□□□□□ -0.29
GAPDH-203ENST00000396858 ADCY4Q8NFM4 1077 aa13.21□□□□□ -0.29
GAPDH-203ENST00000396858 PNPT1Q8TCS8 783 aaKnown RBP13.21□□□□□ -0.29
GAPDH-203ENST00000396858 CT55Q8WUE5 264 aa13.21□□□□□ -0.29
GAPDH-203ENST00000396858 SPSB2Q99619 263 aa13.21□□□□□ -0.29
GAPDH-203ENST00000396858 GPATCH1Q9BRR8 931 aaKnown RBP13.21□□□□□ -0.29
GAPDH-203ENST00000396858 BTBD10Q9BSF8 475 aa13.21□□□□□ -0.29
GAPDH-203ENST00000396858 TAS2R9Q9NYW1 312 aa13.21□□□□□ -0.29
GAPDH-203ENST00000396858 GPN3Q9UHW5 284 aaPredicted RBP13.21□□□□□ -0.29
GAPDH-203ENST00000396858 MKL2Q9ULH7 1088 aa13.21□□□□□ -0.29
GAPDH-203ENST00000396858 PCDHGA7Q9Y5G6 932 aa13.21□□□□□ -0.29
GAPDH-203ENST00000396858 CFAP54Q96N23 3096 aa13.21□□□□□ -0.3
GAPDH-203ENST00000396858 SDK2Q58EX2 2172 aa13.2□□□□□ -0.3
GAPDH-203ENST00000396858 CTNSO60931 367 aa13.2□□□□□ -0.3
GAPDH-203ENST00000396858 ERN1O75460 977 aaKnown RBP13.2□□□□□ -0.3
GAPDH-203ENST00000396858 RECKO95980 971 aa13.2□□□□□ -0.3
GAPDH-203ENST00000396858 PORP16435 677 aaPredicted RBP13.2□□□□□ -0.3
GAPDH-203ENST00000396858 SDHBP21912 280 aa13.2□□□□□ -0.3
GAPDH-203ENST00000396858 IL10P22301 178 aa13.2□□□□□ -0.3
GAPDH-203ENST00000396858 SLC5A2P31639 672 aa13.2□□□□□ -0.3
GAPDH-203ENST00000396858 TRPC1P48995 793 aa13.2□□□□□ -0.3
GAPDH-203ENST00000396858 MRPS35P82673 323 aaKnown RBP13.2□□□□□ -0.3
GAPDH-203ENST00000396858 LRRC74AQ0VAA2 488 aa13.2□□□□□ -0.3
GAPDH-203ENST00000396858 FOXC1Q12948 553 aa13.2□□□□□ -0.3
GAPDH-203ENST00000396858 MLC1Q15049 377 aa13.2□□□□□ -0.3
GAPDH-203ENST00000396858 RABL3Q5HYI8 236 aa13.2□□□□□ -0.3
GAPDH-203ENST00000396858 FAAH2Q6GMR7 532 aa13.2□□□□□ -0.3
GAPDH-203ENST00000396858 MRPL14Q6P1L8 145 aaKnown RBP13.2□□□□□ -0.3
GAPDH-203ENST00000396858 BNC2Q6ZN30 1099 aaPredicted RBP13.2□□□□□ -0.3
GAPDH-203ENST00000396858 DGAT2L6Q6ZPD8 337 aa13.2□□□□□ -0.3
GAPDH-203ENST00000396858 ZNF621Q6ZSS3 439 aa13.2□□□□□ -0.3
GAPDH-203ENST00000396858 LANCL3Q6ZV70 420 aa13.2□□□□□ -0.3
GAPDH-203ENST00000396858 ASRGL1Q7L266 308 aa13.2□□□□□ -0.3
GAPDH-203ENST00000396858 LAPTM4BQ86VI4 370 aa13.2□□□□□ -0.3
GAPDH-203ENST00000396858 KAT2AQ92830 837 aa13.2□□□□□ -0.3
GAPDH-203ENST00000396858 PPWD1Q96BP3 646 aaKnown RBP13.2□□□□□ -0.3
GAPDH-203ENST00000396858 MAGED4Q96JG8 741 aa13.2□□□□□ -0.3
GAPDH-203ENST00000396858 PTCHD1Q96NR3 888 aa13.2□□□□□ -0.3
GAPDH-203ENST00000396858 DGAT2Q96PD7 388 aa13.2□□□□□ -0.3
GAPDH-203ENST00000396858 DPH2Q9BQC3 489 aaPredicted RBP13.2□□□□□ -0.3
GAPDH-203ENST00000396858 SLC35A5Q9BS91 424 aa13.2□□□□□ -0.3
GAPDH-203ENST00000396858 CRB3Q9BUF7 120 aa13.2□□□□□ -0.3
GAPDH-203ENST00000396858 ALOXE3Q9BYJ1 711 aa13.2□□□□□ -0.3
GAPDH-203ENST00000396858 TGIF2Q9GZN2 237 aa13.2□□□□□ -0.3
GAPDH-203ENST00000396858 SLC26A1Q9H2B4 701 aa13.2□□□□□ -0.3
GAPDH-203ENST00000396858 IKZF5Q9H5V7 419 aa13.2□□□□□ -0.3
GAPDH-203ENST00000396858 ANKRA2Q9H9E1 313 aa13.2□□□□□ -0.3
GAPDH-203ENST00000396858 NDE1Q9NXR1 346 aa13.2□□□□□ -0.3
GAPDH-203ENST00000396858 PACSIN3Q9UKS6 424 aa13.2□□□□□ -0.3
GAPDH-203ENST00000396858 PCDHGB4Q9UN71 923 aa13.2□□□□□ -0.3
GAPDH-203ENST00000396858 PCDHB14Q9Y5E9 798 aa13.2□□□□□ -0.3
GAPDH-203ENST00000396858 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.2□□□□□ -0.3
GAPDH-203ENST00000396858 VSTM2BA6NLU5 285 aa13.19□□□□□ -0.3
GAPDH-203ENST00000396858 RAD1O60671 282 aa13.19□□□□□ -0.3
GAPDH-203ENST00000396858 PDE5AO76074 875 aa13.19□□□□□ -0.3
GAPDH-203ENST00000396858 IFNA16P05015 189 aa13.19□□□□□ -0.3
GAPDH-203ENST00000396858 ATP1B1P05026 303 aa13.19□□□□□ -0.3
GAPDH-203ENST00000396858 HEXBP07686 556 aa13.19□□□□□ -0.3
GAPDH-203ENST00000396858 CT62P0C5K7 136 aa13.19□□□□□ -0.3
GAPDH-203ENST00000396858 SLC6A2P23975 617 aa13.19□□□□□ -0.3
GAPDH-203ENST00000396858 RBMS1P29558 406 aaKnown RBP13.19□□□□□ -0.3
GAPDH-203ENST00000396858 MPIP34949 423 aa13.19□□□□□ -0.3
GAPDH-203ENST00000396858 STT3AP46977 705 aa13.19□□□□□ -0.3
GAPDH-203ENST00000396858 RASSF2P50749 326 aa13.19□□□□□ -0.3
GAPDH-203ENST00000396858 ZNF628Q5EBL2 1059 aa13.19□□□□□ -0.3
GAPDH-203ENST00000396858 CPZQ66K79 652 aa13.19□□□□□ -0.3
GAPDH-203ENST00000396858 FAM111BQ6SJ93 734 aa13.19□□□□□ -0.3
GAPDH-203ENST00000396858 ANGPTL8Q6UXH0 198 aa13.19□□□□□ -0.3
GAPDH-203ENST00000396858 ZNF517Q6ZMY9 492 aaPredicted RBP13.19□□□□□ -0.3
GAPDH-203ENST00000396858 MED25Q71SY5 747 aa13.19□□□□□ -0.3
GAPDH-203ENST00000396858 GALNT12Q8IXK2 581 aa13.19□□□□□ -0.3
GAPDH-203ENST00000396858 ST13P4Q8IZP2 240 aaPredicted RBP13.19□□□□□ -0.3
GAPDH-203ENST00000396858 ENDOVQ8N8Q3 282 aaKnown RBP13.19□□□□□ -0.3
GAPDH-203ENST00000396858 OR7G2Q8NG99 324 aa13.19□□□□□ -0.3
GAPDH-203ENST00000396858 DNAJB8Q8NHS0 232 aa13.19□□□□□ -0.3
GAPDH-203ENST00000396858 GOT1L1Q8NHS2 421 aaPredicted RBP13.19□□□□□ -0.3
GAPDH-203ENST00000396858 TMEM125Q96AQ2 219 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms