RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 PROM1O43490 865 aa15.26■□□□□ 0.03
SNX6-202ENST00000396526 MFN2O95140 757 aa15.26■□□□□ 0.03
SNX6-202ENST00000396526 FEN1P39748 380 aaKnown RBP15.26■□□□□ 0.03
SNX6-202ENST00000396526 HMGA2P52926 109 aa15.26■□□□□ 0.03
SNX6-202ENST00000396526 TMBIM6P55061 237 aa15.26■□□□□ 0.03
SNX6-202ENST00000396526 SMAD4Q13485 552 aaKnown RBP15.26■□□□□ 0.03
SNX6-202ENST00000396526 DUSP7Q16829 419 aa15.26■□□□□ 0.03
SNX6-202ENST00000396526 TPRG1LQ5T0D9 272 aa15.26■□□□□ 0.03
SNX6-202ENST00000396526 GPR153Q6NV75 609 aa15.26■□□□□ 0.03
SNX6-202ENST00000396526 ZNF354BQ96LW1 612 aa15.26■□□□□ 0.03
SNX6-202ENST00000396526 PITX2Q99697 317 aa15.26■□□□□ 0.03
SNX6-202ENST00000396526 DUXAA6NLW8 204 aa15.25■□□□□ 0.03
SNX6-202ENST00000396526 PGRMC2O15173 223 aa15.25■□□□□ 0.03
SNX6-202ENST00000396526 UGT2B7P16662 529 aa15.25■□□□□ 0.03
SNX6-202ENST00000396526 DCKP27707 260 aa15.25■□□□□ 0.03
SNX6-202ENST00000396526 GPR18Q14330 331 aa15.25■□□□□ 0.03
SNX6-202ENST00000396526 LASP1Q14847 261 aaKnown RBP15.25■□□□□ 0.03
SNX6-202ENST00000396526 MAD2L1BPQ15013 274 aaPredicted RBP15.25■□□□□ 0.03
SNX6-202ENST00000396526 CYP27C1Q4G0S4 372 aa15.25■□□□□ 0.03
SNX6-202ENST00000396526 RBM12BQ8IXT5 1001 aaKnown RBP15.25■□□□□ 0.03
SNX6-202ENST00000396526 TSTD1Q8NFU3 115 aa15.25■□□□□ 0.03
SNX6-202ENST00000396526 GPBAR1Q8TDU6 330 aa15.25■□□□□ 0.03
SNX6-202ENST00000396526 RAB2BQ8WUD1 216 aa15.25■□□□□ 0.03
SNX6-202ENST00000396526 KLHDC7BQ96G42 594 aa15.25■□□□□ 0.03
SNX6-202ENST00000396526 TREX2Q9BQ50 279 aaPredicted RBP15.25■□□□□ 0.03
SNX6-202ENST00000396526 PHF7Q9BWX1 381 aaPredicted RBP15.25■□□□□ 0.03
SNX6-202ENST00000396526 C6orf106Q9H6K1 298 aaPredicted RBP15.25■□□□□ 0.03
SNX6-202ENST00000396526 TMEM229AB2RXF0 380 aa15.25■□□□□ 0.03
SNX6-202ENST00000396526 GPAT3Q53EU6 434 aa15.25■□□□□ 0.03
SNX6-202ENST00000396526 RPS26P11Q5JNZ5 115 aaPredicted RBP15.25■□□□□ 0.03
SNX6-202ENST00000396526 FGD3Q5JSP0 725 aa15.25■□□□□ 0.03
SNX6-202ENST00000396526 DCST1Q5T197 706 aa15.25■□□□□ 0.03
SNX6-202ENST00000396526 FBLIM1Q8WUP2 373 aa15.25■□□□□ 0.03
SNX6-202ENST00000396526 MAPKAP1Q9BPZ7 522 aa15.25■□□□□ 0.03
SNX6-202ENST00000396526 ZFYVE21Q9BQ24 234 aa15.25■□□□□ 0.03
SNX6-202ENST00000396526 GPR174Q9BXC1 333 aa15.25■□□□□ 0.03
SNX6-202ENST00000396526 HRASLS2Q9NWW9 162 aa15.25■□□□□ 0.03
SNX6-202ENST00000396526 EBF1Q9UH73 591 aa15.25■□□□□ 0.03
SNX6-202ENST00000396526 LIPT1Q9Y234 373 aa15.25■□□□□ 0.03
SNX6-202ENST00000396526 A6NCN8 305 aa15.25■□□□□ 0.03
SNX6-202ENST00000396526 ZSCAN9O15535 394 aaPredicted RBP15.25■□□□□ 0.03
SNX6-202ENST00000396526 TNFSF14O43557 240 aa15.25■□□□□ 0.03
SNX6-202ENST00000396526 RGS10O43665 173 aa15.25■□□□□ 0.03
SNX6-202ENST00000396526 ZNF217O75362 1048 aa15.25■□□□□ 0.03
SNX6-202ENST00000396526 THEGLP0DJG4 465 aa15.25■□□□□ 0.03
SNX6-202ENST00000396526 SRFP11831 508 aa15.25■□□□□ 0.03
SNX6-202ENST00000396526 FMO3P31513 532 aa15.25■□□□□ 0.03
SNX6-202ENST00000396526 KCNJ5P48544 419 aa15.25■□□□□ 0.03
SNX6-202ENST00000396526 HPCAP84074 193 aa15.25■□□□□ 0.03
SNX6-202ENST00000396526 RELAQ04206 551 aa15.25■□□□□ 0.03
SNX6-202ENST00000396526 GANABQ14697 944 aaKnown RBP15.25■□□□□ 0.03
SNX6-202ENST00000396526 KCT2Q8NC54 265 aa15.25■□□□□ 0.03
SNX6-202ENST00000396526 OR13F1Q8NGS4 319 aa15.25■□□□□ 0.03
SNX6-202ENST00000396526 UTP15Q8TED0 518 aaKnown RBP15.25■□□□□ 0.03
SNX6-202ENST00000396526 OR2A14Q96R47 310 aa15.25■□□□□ 0.03
SNX6-202ENST00000396526 RASSF1Q9NS23 344 aa15.25■□□□□ 0.03
SNX6-202ENST00000396526 ACER3Q9NUN7 267 aa15.25■□□□□ 0.03
SNX6-202ENST00000396526 SNX11Q9Y5W9 270 aa15.25■□□□□ 0.03
SNX6-202ENST00000396526 ZNF888P0CJ79 500 aaPredicted RBP15.24■□□□□ 0.03
SNX6-202ENST00000396526 HOXB3P14651 431 aaPredicted RBP15.24■□□□□ 0.03
SNX6-202ENST00000396526 JUNDP17535 347 aa15.24■□□□□ 0.03
SNX6-202ENST00000396526 CDC42P60953 191 aa15.24■□□□□ 0.03
SNX6-202ENST00000396526 MVKQ03426 396 aa15.24■□□□□ 0.03
SNX6-202ENST00000396526 NPTX1Q15818 432 aa15.24■□□□□ 0.03
SNX6-202ENST00000396526 C18orf63Q68DL7 685 aa15.24■□□□□ 0.03
SNX6-202ENST00000396526 SUN3Q8TAQ9 357 aa15.24■□□□□ 0.03
SNX6-202ENST00000396526 ABHD8Q96I13 439 aa15.24■□□□□ 0.03
SNX6-202ENST00000396526 AICDAQ9GZX7 198 aa15.24■□□□□ 0.03
SNX6-202ENST00000396526 CDC14AQ9UNH5 594 aa15.24■□□□□ 0.03
SNX6-202ENST00000396526 MRPS17Q9Y2R5 130 aaKnown RBP15.24■□□□□ 0.03
SNX6-202ENST00000396526 A0A0G2JPF8 293 aa15.24■□□□□ 0.03
SNX6-202ENST00000396526 HNRNPCL2B2RXH8 293 aa15.24■□□□□ 0.03
SNX6-202ENST00000396526 HNRNPCL3B7ZW38 293 aa15.24■□□□□ 0.03
SNX6-202ENST00000396526 XPNPEP2O43895 674 aa15.24■□□□□ 0.03
SNX6-202ENST00000396526 AGR2O95994 175 aa15.24■□□□□ 0.03
SNX6-202ENST00000396526 HMGN2P05204 90 aaKnown RBP15.24■□□□□ 0.03
SNX6-202ENST00000396526 C8orf89P0DMQ9 161 aa15.24■□□□□ 0.03
SNX6-202ENST00000396526 HNRNPCL4P0DMR1 293 aa15.24■□□□□ 0.03
SNX6-202ENST00000396526 CCNA2P20248 432 aa15.24■□□□□ 0.03
SNX6-202ENST00000396526 CD6P30203 668 aa15.24■□□□□ 0.03
SNX6-202ENST00000396526 IDH2P48735 452 aaKnown RBP15.24■□□□□ 0.03
SNX6-202ENST00000396526 FBXO42Q6P3S6 717 aa15.24■□□□□ 0.03
SNX6-202ENST00000396526 VN1R4Q7Z5H5 301 aa15.24■□□□□ 0.03
SNX6-202ENST00000396526 TRIM73Q86UV7 250 aa15.24■□□□□ 0.03
SNX6-202ENST00000396526 AVL9Q8NBF6 648 aa15.24■□□□□ 0.03
SNX6-202ENST00000396526 OR4K14Q8NGD5 310 aa15.24■□□□□ 0.03
SNX6-202ENST00000396526 OR4C15Q8NGM1 316 aa15.24■□□□□ 0.03
SNX6-202ENST00000396526 FAM81AQ8TBF8 368 aa15.24■□□□□ 0.03
SNX6-202ENST00000396526 CNRIP1Q96F85 164 aaPredicted RBP15.24■□□□□ 0.03
SNX6-202ENST00000396526 GAS2L1Q99501 681 aaPredicted RBP15.24■□□□□ 0.03
SNX6-202ENST00000396526 BCL2L10Q9HD36 194 aa15.24■□□□□ 0.03
SNX6-202ENST00000396526 ARRDC5A6NEK1 342 aa15.24■□□□□ 0.03
SNX6-202ENST00000396526 SEC14L2O76054 403 aa15.24■□□□□ 0.03
SNX6-202ENST00000396526 OXSR1O95747 527 aaPredicted RBP15.24■□□□□ 0.03
SNX6-202ENST00000396526 IGLV3-19P01714 112 aa15.24■□□□□ 0.03
SNX6-202ENST00000396526 H1F0P07305 194 aaKnown RBP15.24■□□□□ 0.03
SNX6-202ENST00000396526 ITIH1P19827 911 aa15.24■□□□□ 0.03
SNX6-202ENST00000396526 TDGQ13569 410 aa15.24■□□□□ 0.03
SNX6-202ENST00000396526 MANEAQ5SRI9 462 aa15.24■□□□□ 0.03
SNX6-202ENST00000396526 PRAMEF8Q5VWM4 474 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms