RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 XAF1Q6GPH4 301 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 B3GNT8Q7Z7M8 397 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 KCT2Q8NC54 265 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 OR5D16Q8NGK9 328 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 OR13F1Q8NGS4 319 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 OR52J3Q8NH60 311 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 UTP15Q8TED0 518 aaKnown RBP14.12□□□□□ -0.15
CBX3-202ENST00000396386 APOBEC4Q8WW27 367 aaKnown RBP14.12□□□□□ -0.15
CBX3-202ENST00000396386 SGCDQ92629 289 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 THAP11Q96EK4 314 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 MAPKAP1Q9BPZ7 522 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 SLC2A4RGQ9NR83 387 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 CPNE7Q9UBL6 633 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 CDC14AQ9UNH5 594 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 TPRKBQ9Y3C4 175 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 ARRDC5A6NEK1 342 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 C2orf74A8MZ97 194 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 PROM1O43490 865 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 CCNB2O95067 398 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 FHP07954 510 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 NR2F1P10589 423 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 FMO3P31513 532 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 NUDT1P36639 197 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 LIMS1P48059 325 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 RPP38P78345 283 aaKnown RBP14.12□□□□□ -0.15
CBX3-202ENST00000396386 PRR5P85299 388 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 DUSP2Q05923 314 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 TUBA3CQ13748 450 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 SUZ12Q15022 739 aaKnown RBP14.12□□□□□ -0.15
CBX3-202ENST00000396386 GPR107Q5VW38 600 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 FIGLAQ6QHK4 219 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 KRT73Q86Y46 540 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 TAGAPQ8N103 731 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 GPR32P1Q8NGA4 272 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 BBS10Q8TAM1 723 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 PHF10Q8WUB8 498 aaKnown RBP14.12□□□□□ -0.15
CBX3-202ENST00000396386 C12orf43Q96C57 262 aaKnown RBP14.12□□□□□ -0.15
CBX3-202ENST00000396386 HRASLS5Q96KN8 279 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 COL21A1Q96P44 957 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 NODALQ96S42 347 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 PHF7Q9BWX1 381 aaPredicted RBP14.12□□□□□ -0.15
CBX3-202ENST00000396386 ZNF556Q9HAH1 456 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 PAK1IP1Q9NWT1 392 aaPredicted RBP14.12□□□□□ -0.15
CBX3-202ENST00000396386 SCN3BQ9NY72 215 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 TMEM9Q9P0T7 183 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 SEC14L3Q9UDX4 400 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 PHF11Q9UIL8 331 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 KCND3Q9UK17 655 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 ENTPD2Q9Y5L3 495 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 ZNF780BQ9Y6R6 833 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 CCDC88CQ9P219 2028 aa14.12□□□□□ -0.15
CBX3-202ENST00000396386 KIR2DS5A0A0G2JLQ3 304 aa14.11□□□□□ -0.15
CBX3-202ENST00000396386 A0A0G2JNG1 304 aa14.11□□□□□ -0.15
CBX3-202ENST00000396386 URADA6NGE7 173 aa14.11□□□□□ -0.15
CBX3-202ENST00000396386 OR5K4A6NMS3 321 aa14.11□□□□□ -0.15
CBX3-202ENST00000396386 KIR2DS3K7RE56 304 aa14.11□□□□□ -0.15
CBX3-202ENST00000396386 AXIN1O15169 862 aa14.11□□□□□ -0.15
CBX3-202ENST00000396386 XPNPEP2O43895 674 aa14.11□□□□□ -0.15
CBX3-202ENST00000396386 SERPINB7O75635 380 aa14.11□□□□□ -0.15
CBX3-202ENST00000396386 SEC14L2O76054 403 aa14.11□□□□□ -0.15
CBX3-202ENST00000396386 THEGLP0DJG4 465 aa14.11□□□□□ -0.15
CBX3-202ENST00000396386 ALPPL2P10696 532 aa14.11□□□□□ -0.15
CBX3-202ENST00000396386 JUNDP17535 347 aa14.11□□□□□ -0.15
CBX3-202ENST00000396386 EPHA2P29317 976 aa14.11□□□□□ -0.15
CBX3-202ENST00000396386 BUD31P41223 144 aaPredicted RBP14.11□□□□□ -0.15
CBX3-202ENST00000396386 PXNP49023 591 aaPredicted RBP14.11□□□□□ -0.15
CBX3-202ENST00000396386 UBE2IP63279 158 aaKnown RBP14.11□□□□□ -0.15
CBX3-202ENST00000396386 TNFRSF17Q02223 184 aa14.11□□□□□ -0.15
CBX3-202ENST00000396386 EIF2B5Q13144 721 aaKnown RBP14.11□□□□□ -0.15
CBX3-202ENST00000396386 GNA13Q14344 377 aa14.11□□□□□ -0.15
CBX3-202ENST00000396386 GANABQ14697 944 aaKnown RBP14.11□□□□□ -0.15
CBX3-202ENST00000396386 KIR2DS5Q14953 304 aa14.11□□□□□ -0.15
CBX3-202ENST00000396386 CEBPEQ15744 281 aa14.11□□□□□ -0.15
CBX3-202ENST00000396386 GPR19Q15760 415 aa14.11□□□□□ -0.15
CBX3-202ENST00000396386 SYPL1Q16563 259 aa14.11□□□□□ -0.15
CBX3-202ENST00000396386 ZNF750Q32MQ0 723 aa14.11□□□□□ -0.15
CBX3-202ENST00000396386 FCRL6Q6DN72 434 aa14.11□□□□□ -0.15
CBX3-202ENST00000396386 TMEM107Q6UX40 140 aa14.11□□□□□ -0.15
CBX3-202ENST00000396386 CCDC116Q8IYX3 515 aa14.11□□□□□ -0.15
CBX3-202ENST00000396386 ZCCHC10Q8TBK6 192 aa14.11□□□□□ -0.15
CBX3-202ENST00000396386 XAGE5Q8WWM1 108 aa14.11□□□□□ -0.15
CBX3-202ENST00000396386 PATE1Q8WXA2 126 aa14.11□□□□□ -0.15
CBX3-202ENST00000396386 TM4SF19Q96DZ7 209 aa14.11□□□□□ -0.15
CBX3-202ENST00000396386 OR2A5Q96R48 311 aa14.11□□□□□ -0.15
CBX3-202ENST00000396386 SERINC2Q96SA4 455 aa14.11□□□□□ -0.15
CBX3-202ENST00000396386 DOK1Q99704 481 aa14.11□□□□□ -0.15
CBX3-202ENST00000396386 TREX2Q9BQ50 279 aaPredicted RBP14.11□□□□□ -0.15
CBX3-202ENST00000396386 GPR174Q9BXC1 333 aa14.11□□□□□ -0.15
CBX3-202ENST00000396386 TCEAL2Q9H3H9 227 aaPredicted RBP14.11□□□□□ -0.15
CBX3-202ENST00000396386 GPR27Q9NS67 375 aa14.11□□□□□ -0.15
CBX3-202ENST00000396386 ACER3Q9NUN7 267 aa14.11□□□□□ -0.15
CBX3-202ENST00000396386 PSME2Q9UL46 239 aa14.11□□□□□ -0.15
CBX3-202ENST00000396386 GPC6Q9Y625 555 aaPredicted RBP14.11□□□□□ -0.15
CBX3-202ENST00000396386 A0A0J9YVX5 310 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 SPTY2D1-AS1A0A0U1RR47 76 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 P2RX6O15547 441 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 EMC8O43402 210 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 CTSVO60911 334 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 C8orf89P0DMQ9 161 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 ZNF10P21506 573 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms