RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 ZNF681Q96N22 645 aa17.91■□□□□ 0.46
HOXA9-202ENST00000396345 AGAP4Q96P64 663 aa17.91■□□□□ 0.46
HOXA9-202ENST00000396345 OR8D2Q9GZM6 311 aa17.91■□□□□ 0.46
HOXA9-202ENST00000396345 REEP4Q9H6H4 257 aa17.91■□□□□ 0.46
HOXA9-202ENST00000396345 WDR55Q9H6Y2 383 aaPredicted RBP17.91■□□□□ 0.46
HOXA9-202ENST00000396345 ZNF552Q9H707 407 aaPredicted RBP17.91■□□□□ 0.46
HOXA9-202ENST00000396345 SLC35C2Q9NQQ7 365 aa17.91■□□□□ 0.46
HOXA9-202ENST00000396345 ASIC5Q9NY37 505 aa17.91■□□□□ 0.46
HOXA9-202ENST00000396345 NOP53Q9NZM5 478 aaKnown RBP17.91■□□□□ 0.46
HOXA9-202ENST00000396345 ENTPD4Q9Y227 616 aa17.91■□□□□ 0.46
HOXA9-202ENST00000396345 ATXN7O15265 892 aaPredicted RBP17.9■□□□□ 0.46
HOXA9-202ENST00000396345 DDAH2O95865 285 aa17.9■□□□□ 0.46
HOXA9-202ENST00000396345 ALPPP05187 535 aa17.9■□□□□ 0.46
HOXA9-202ENST00000396345 SFTPCP11686 197 aa17.9■□□□□ 0.46
HOXA9-202ENST00000396345 CLCN2P51788 898 aa17.9■□□□□ 0.46
HOXA9-202ENST00000396345 GPR143P51810 404 aa17.9■□□□□ 0.46
HOXA9-202ENST00000396345 GUCY1A3Q02108 690 aa17.9■□□□□ 0.46
HOXA9-202ENST00000396345 PTGR1Q14914 329 aa17.9■□□□□ 0.46
HOXA9-202ENST00000396345 SLC9B1Q4ZJI4 515 aa17.9■□□□□ 0.46
HOXA9-202ENST00000396345 NXNQ6DKJ4 435 aa17.9■□□□□ 0.46
HOXA9-202ENST00000396345 TCTN3Q6NUS6 607 aa17.9■□□□□ 0.46
HOXA9-202ENST00000396345 LRRC25Q8N386 305 aaPredicted RBP17.9■□□□□ 0.46
HOXA9-202ENST00000396345 KIF2BQ8N4N8 673 aa17.9■□□□□ 0.46
HOXA9-202ENST00000396345 SIRT6Q8N6T7 355 aa17.9■□□□□ 0.46
HOXA9-202ENST00000396345 SLC2A12Q8TD20 617 aa17.9■□□□□ 0.46
HOXA9-202ENST00000396345 DOK4Q8TEW6 326 aa17.9■□□□□ 0.46
HOXA9-202ENST00000396345 PSMF1Q92530 271 aa17.9■□□□□ 0.46
HOXA9-202ENST00000396345 SENP5Q96HI0 755 aaPredicted RBP17.9■□□□□ 0.46
HOXA9-202ENST00000396345 BBS4Q96RK4 519 aa17.9■□□□□ 0.46
HOXA9-202ENST00000396345 TAS2R7Q9NYW3 318 aa17.9■□□□□ 0.46
HOXA9-202ENST00000396345 PTGFRNQ9P2B2 879 aa17.9■□□□□ 0.46
HOXA9-202ENST00000396345 A8MUI8 341 aa17.89■□□□□ 0.45
HOXA9-202ENST00000396345 DIAPH2O60879 1101 aa17.89■□□□□ 0.45
HOXA9-202ENST00000396345 TGDSO95455 350 aa17.89■□□□□ 0.45
HOXA9-202ENST00000396345 G6PDP11413 515 aa17.89■□□□□ 0.45
HOXA9-202ENST00000396345 NT5EP21589 574 aa17.89■□□□□ 0.45
HOXA9-202ENST00000396345 HPCAL1P37235 193 aa17.89■□□□□ 0.45
HOXA9-202ENST00000396345 DUSP2Q05923 314 aa17.89■□□□□ 0.45
HOXA9-202ENST00000396345 ZNF267Q14586 743 aaPredicted RBP17.89■□□□□ 0.45
HOXA9-202ENST00000396345 PRSS53Q2L4Q9 553 aa17.89■□□□□ 0.45
HOXA9-202ENST00000396345 SPRED3Q2MJR0 410 aa17.89■□□□□ 0.45
HOXA9-202ENST00000396345 CRB2Q5IJ48 1285 aa17.89■□□□□ 0.45
HOXA9-202ENST00000396345 C6orf163Q5TEZ5 329 aa17.89■□□□□ 0.45
HOXA9-202ENST00000396345 OGFOD2Q6N063 350 aa17.89■□□□□ 0.45
HOXA9-202ENST00000396345 EPGNQ6UW88 154 aa17.89■□□□□ 0.45
HOXA9-202ENST00000396345 R3HCC1LQ7Z5L2 792 aaKnown RBP17.89■□□□□ 0.45
HOXA9-202ENST00000396345 SPATA19Q7Z5L4 167 aa17.89■□□□□ 0.45
HOXA9-202ENST00000396345 GALNT12Q8IXK2 581 aa17.89■□□□□ 0.45
HOXA9-202ENST00000396345 CCDC116Q8IYX3 515 aa17.89■□□□□ 0.45
HOXA9-202ENST00000396345 APCDD1LQ8NCL9 501 aa17.89■□□□□ 0.45
HOXA9-202ENST00000396345 OR1N1Q8NGS0 311 aa17.89■□□□□ 0.45
HOXA9-202ENST00000396345 ACTRT2Q8TDY3 377 aa17.89■□□□□ 0.45
HOXA9-202ENST00000396345 MAELQ96JY0 434 aaKnown RBP17.89■□□□□ 0.45
HOXA9-202ENST00000396345 ART5Q96L15 291 aa17.89■□□□□ 0.45
HOXA9-202ENST00000396345 SMAD5Q99717 465 aaKnown RBP17.89■□□□□ 0.45
HOXA9-202ENST00000396345 CNPPD1Q9BV87 410 aa17.89■□□□□ 0.45
HOXA9-202ENST00000396345 DEFB126Q9BYW3 111 aa17.89■□□□□ 0.45
HOXA9-202ENST00000396345 CXorf21Q9HAI6 301 aa17.89■□□□□ 0.45
HOXA9-202ENST00000396345 ZNF71Q9NQZ8 489 aaPredicted RBP17.89■□□□□ 0.45
HOXA9-202ENST00000396345 COPS7AQ9UBW8 275 aa17.89■□□□□ 0.45
HOXA9-202ENST00000396345 TP53TG5Q9Y2B4 290 aa17.89■□□□□ 0.45
HOXA9-202ENST00000396345 ZNF451Q9Y4E5 1061 aa17.89■□□□□ 0.45
HOXA9-202ENST00000396345 PCDHGB7Q9Y5F8 929 aa17.89■□□□□ 0.45
HOXA9-202ENST00000396345 ATRXP46100 2492 aa17.88■□□□□ 0.45
HOXA9-202ENST00000396345 TRBV11-1A0A0K0K1C0 115 aa17.88■□□□□ 0.45
HOXA9-202ENST00000396345 K7EM74 188 aa17.88■□□□□ 0.45
HOXA9-202ENST00000396345 TBX19O60806 448 aa17.88■□□□□ 0.45
HOXA9-202ENST00000396345 EDF1O60869 148 aaKnown RBP17.88■□□□□ 0.45
HOXA9-202ENST00000396345 ATP1B1P05026 303 aa17.88■□□□□ 0.45
HOXA9-202ENST00000396345 SOX11P35716 441 aa17.88■□□□□ 0.45
HOXA9-202ENST00000396345 RPL3P39023 403 aaKnown RBP17.88■□□□□ 0.45
HOXA9-202ENST00000396345 MDH1P40925 334 aaKnown RBP17.88■□□□□ 0.45
HOXA9-202ENST00000396345 DIO3P55073 304 aa17.88■□□□□ 0.45
HOXA9-202ENST00000396345 LACTB2Q53H82 288 aaPredicted RBP17.88■□□□□ 0.45
HOXA9-202ENST00000396345 B3GNTL1Q67FW5 361 aaPredicted RBP17.88■□□□□ 0.45
HOXA9-202ENST00000396345 ANKRD26P1Q6NSI1 321 aa17.88■□□□□ 0.45
HOXA9-202ENST00000396345 H3F3CQ6NXT2 135 aa17.88■□□□□ 0.45
HOXA9-202ENST00000396345 ISLR2Q6UXK2 745 aa17.88■□□□□ 0.45
HOXA9-202ENST00000396345 ZNF321PQ8N8H1 164 aa17.88■□□□□ 0.45
HOXA9-202ENST00000396345 LSM14AQ8ND56 463 aaKnown RBP17.88■□□□□ 0.45
HOXA9-202ENST00000396345 ZNF721Q8TF20 911 aa17.88■□□□□ 0.45
HOXA9-202ENST00000396345 PPCDCQ96CD2 204 aa17.88■□□□□ 0.45
HOXA9-202ENST00000396345 MTERF3Q96E29 417 aa17.88■□□□□ 0.45
HOXA9-202ENST00000396345 ZNF764Q96H86 408 aaPredicted RBP17.88■□□□□ 0.45
HOXA9-202ENST00000396345 FBXL20Q96IG2 436 aa17.88■□□□□ 0.45
HOXA9-202ENST00000396345 SEMA4CQ9C0C4 833 aa17.88■□□□□ 0.45
HOXA9-202ENST00000396345 SH3BP4Q9P0V3 963 aa17.88■□□□□ 0.45
HOXA9-202ENST00000396345 TEKT2Q9UIF3 430 aa17.88■□□□□ 0.45
HOXA9-202ENST00000396345 ERVK-19Q9WJR5 959 aa17.88■□□□□ 0.45
HOXA9-202ENST00000396345 TNRC6AQ8NDV7 1962 aaKnown RBP17.88■□□□□ 0.45
HOXA9-202ENST00000396345 GABRR3A8MPY1 467 aa17.87■□□□□ 0.45
HOXA9-202ENST00000396345 MYO1GB0I1T2 1018 aa17.87■□□□□ 0.45
HOXA9-202ENST00000396345 HRKO00198 91 aa17.87■□□□□ 0.45
HOXA9-202ENST00000396345 SCAMP2O15127 329 aaKnown RBP17.87■□□□□ 0.45
HOXA9-202ENST00000396345 PDGFAP04085 211 aa17.87■□□□□ 0.45
HOXA9-202ENST00000396345 DDX5P17844 614 aaKnown RBP17.87■□□□□ 0.45
HOXA9-202ENST00000396345 PRPS1L1P21108 318 aa17.87■□□□□ 0.45
HOXA9-202ENST00000396345 NTSP30990 170 aa17.87■□□□□ 0.45
HOXA9-202ENST00000396345 MPIP34949 423 aa17.87■□□□□ 0.45
HOXA9-202ENST00000396345 PTGER1P34995 402 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms