RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 ANXA11P50995 505 aaKnown RBP15.87■□□□□ 0.13
NUP50-202ENST00000396096 NCBP2P52298 156 aaKnown RBP eCLIP15.87■□□□□ 0.13
NUP50-202ENST00000396096 CRISP1P54107 249 aa15.87■□□□□ 0.13
NUP50-202ENST00000396096 RAB15P59190 212 aa15.87■□□□□ 0.13
NUP50-202ENST00000396096 CDC42P60953 191 aa15.87■□□□□ 0.13
NUP50-202ENST00000396096 ADAM15Q13444 863 aa15.87■□□□□ 0.13
NUP50-202ENST00000396096 PTGES3Q15185 160 aaKnown RBP15.87■□□□□ 0.13
NUP50-202ENST00000396096 RAB30Q15771 203 aa15.87■□□□□ 0.13
NUP50-202ENST00000396096 FRMPD2BQ6IN97 320 aa15.87■□□□□ 0.13
NUP50-202ENST00000396096 SLC44A2Q8IWA5 706 aaPredicted RBP15.87■□□□□ 0.13
NUP50-202ENST00000396096 TMEM145Q8NBT3 493 aa15.87■□□□□ 0.13
NUP50-202ENST00000396096 OR8K5Q8NH50 307 aa15.87■□□□□ 0.13
NUP50-202ENST00000396096 BBS10Q8TAM1 723 aa15.87■□□□□ 0.13
NUP50-202ENST00000396096 MIPOL1Q8TD10 442 aa15.87■□□□□ 0.13
NUP50-202ENST00000396096 SLC38A4Q969I6 547 aa15.87■□□□□ 0.13
NUP50-202ENST00000396096 GTPBP3Q969Y2 492 aaKnown RBP15.87■□□□□ 0.13
NUP50-202ENST00000396096 PLEKHA8Q96JA3 519 aa15.87■□□□□ 0.13
NUP50-202ENST00000396096 BBS4Q96RK4 519 aa15.87■□□□□ 0.13
NUP50-202ENST00000396096 FUZQ9BT04 418 aa15.87■□□□□ 0.13
NUP50-202ENST00000396096 ITPAQ9BY32 194 aa15.87■□□□□ 0.13
NUP50-202ENST00000396096 ZCCHC3Q9NUD5 404 aaKnown RBP15.87■□□□□ 0.13
NUP50-202ENST00000396096 IMPAD1Q9NX62 359 aa15.87■□□□□ 0.13
NUP50-202ENST00000396096 RHCGQ9UBD6 479 aa15.87■□□□□ 0.13
NUP50-202ENST00000396096 KLF15Q9UIH9 416 aa15.87■□□□□ 0.13
NUP50-202ENST00000396096 CES1P1Q9UKY3 287 aa15.87■□□□□ 0.13
NUP50-202ENST00000396096 TMCC3Q9ULS5 477 aa15.87■□□□□ 0.13
NUP50-202ENST00000396096 DUSP12Q9UNI6 340 aa15.87■□□□□ 0.13
NUP50-202ENST00000396096 MGAT4BQ9UQ53 548 aa15.87■□□□□ 0.13
NUP50-202ENST00000396096 MDC1Q14676 2089 aaKnown RBP15.87■□□□□ 0.13
NUP50-202ENST00000396096 SH3D21A4FU49 640 aa15.86■□□□□ 0.13
NUP50-202ENST00000396096 ZBTB11O95625 1053 aaPredicted RBP15.86■□□□□ 0.13
NUP50-202ENST00000396096 CHMP24386 653 aa15.86■□□□□ 0.13
NUP50-202ENST00000396096 ELAVL4P26378 380 aaKnown RBP15.86■□□□□ 0.13
NUP50-202ENST00000396096 PPP2R1BP30154 601 aa15.86■□□□□ 0.13
NUP50-202ENST00000396096 MAGEA10P43363 369 aaPredicted RBP15.86■□□□□ 0.13
NUP50-202ENST00000396096 SMIM11AP58511 58 aa15.86■□□□□ 0.13
NUP50-202ENST00000396096 CEBPEQ15744 281 aa15.86■□□□□ 0.13
NUP50-202ENST00000396096 SYPL1Q16563 259 aa15.86■□□□□ 0.13
NUP50-202ENST00000396096 ANKDD1AQ495B1 522 aa15.86■□□□□ 0.13
NUP50-202ENST00000396096 BHLHB9Q6PI77 547 aa15.86■□□□□ 0.13
NUP50-202ENST00000396096 KRT73Q86Y46 540 aa15.86■□□□□ 0.13
NUP50-202ENST00000396096 SLC15A4Q8N697 577 aa15.86■□□□□ 0.13
NUP50-202ENST00000396096 SUN3Q8TAQ9 357 aa15.86■□□□□ 0.13
NUP50-202ENST00000396096 UTP15Q8TED0 518 aaKnown RBP15.86■□□□□ 0.13
NUP50-202ENST00000396096 RIPOR3Q96MK2 946 aa15.86■□□□□ 0.13
NUP50-202ENST00000396096 COL21A1Q96P44 957 aa15.86■□□□□ 0.13
NUP50-202ENST00000396096 MCOLN1Q9GZU1 580 aa15.86■□□□□ 0.13
NUP50-202ENST00000396096 TWSG1Q9GZX9 223 aa15.86■□□□□ 0.13
NUP50-202ENST00000396096 SEC14L3Q9UDX4 400 aa15.86■□□□□ 0.13
NUP50-202ENST00000396096 NDOR1Q9UHB4 597 aa15.86■□□□□ 0.13
NUP50-202ENST00000396096 PCOLCE2Q9UKZ9 415 aa15.86■□□□□ 0.13
NUP50-202ENST00000396096 PNMA8BQ9ULN7 279 aaPredicted RBP15.86■□□□□ 0.13
NUP50-202ENST00000396096 B3GNT3Q9Y2A9 372 aa15.86■□□□□ 0.13
NUP50-202ENST00000396096 ATG4BQ9Y4P1 393 aa15.86■□□□□ 0.13
NUP50-202ENST00000396096 COL4A2P08572 1712 aa15.86■□□□□ 0.13
NUP50-202ENST00000396096 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.86■□□□□ 0.13
NUP50-202ENST00000396096 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.86■□□□□ 0.13
NUP50-202ENST00000396096 KLF8O95600 359 aaPredicted RBP15.86■□□□□ 0.13
NUP50-202ENST00000396096 AIFM1O95831 613 aa15.86■□□□□ 0.13
NUP50-202ENST00000396096 EGFP01133 1207 aa15.86■□□□□ 0.13
NUP50-202ENST00000396096 H1F0P07305 194 aaKnown RBP15.86■□□□□ 0.13
NUP50-202ENST00000396096 CHRM5P08912 532 aaPredicted RBP15.86■□□□□ 0.13
NUP50-202ENST00000396096 POU2F1P14859 743 aa15.86■□□□□ 0.13
NUP50-202ENST00000396096 CTHP32929 405 aa15.86■□□□□ 0.13
NUP50-202ENST00000396096 DGCR6Q14129 220 aa15.86■□□□□ 0.13
NUP50-202ENST00000396096 IRF3Q14653 427 aa15.86■□□□□ 0.13
NUP50-202ENST00000396096 NFATC4Q14934 902 aa15.86■□□□□ 0.13
NUP50-202ENST00000396096 PRAMEF8Q5VWM4 474 aa15.86■□□□□ 0.13
NUP50-202ENST00000396096 PRAMEF7Q5VXH5 474 aa15.86■□□□□ 0.13
NUP50-202ENST00000396096 SLC48A1Q6P1K1 146 aa15.86■□□□□ 0.13
NUP50-202ENST00000396096 AMIGO1Q86WK6 493 aa15.86■□□□□ 0.13
NUP50-202ENST00000396096 PAQR7Q86WK9 346 aa15.86■□□□□ 0.13
NUP50-202ENST00000396096 OR56A1Q8NGH5 318 aa15.86■□□□□ 0.13
NUP50-202ENST00000396096 OR4D11Q8NGI4 311 aa15.86■□□□□ 0.13
NUP50-202ENST00000396096 DYNC2LI1Q8TCX1 351 aa15.86■□□□□ 0.13
NUP50-202ENST00000396096 OR1E3Q8WZA6 343 aa15.86■□□□□ 0.13
NUP50-202ENST00000396096 SPATA5L1Q9BVQ7 753 aa15.86■□□□□ 0.13
NUP50-202ENST00000396096 SLC28A3Q9HAS3 691 aa15.86■□□□□ 0.13
NUP50-202ENST00000396096 LYARQ9NX58 379 aaKnown RBP15.86■□□□□ 0.13
NUP50-202ENST00000396096 REV1Q9UBZ9 1251 aa15.86■□□□□ 0.13
NUP50-202ENST00000396096 TBC1D29Q9UFV1 150 aa15.86■□□□□ 0.13
NUP50-202ENST00000396096 APOBEC3BQ9UH17 382 aaKnown RBP15.86■□□□□ 0.13
NUP50-202ENST00000396096 LAMA3Q16787 3333 aa15.85■□□□□ 0.13
NUP50-202ENST00000396096 POM121BA6NF01 834 aa15.85■□□□□ 0.13
NUP50-202ENST00000396096 M0R3G1 203 aa15.85■□□□□ 0.13
NUP50-202ENST00000396096 PGRMC2O15173 223 aa15.85■□□□□ 0.13
NUP50-202ENST00000396096 PRKRAO75569 313 aaKnown RBP15.85■□□□□ 0.13
NUP50-202ENST00000396096 SLITRK5O94991 958 aa15.85■□□□□ 0.13
NUP50-202ENST00000396096 NR2F1P10589 423 aa15.85■□□□□ 0.13
NUP50-202ENST00000396096 OSMP13725 252 aa15.85■□□□□ 0.13
NUP50-202ENST00000396096 F3P13726 295 aa15.85■□□□□ 0.13
NUP50-202ENST00000396096 CD36P16671 472 aa15.85■□□□□ 0.13
NUP50-202ENST00000396096 ZNF12P17014 697 aa15.85■□□□□ 0.13
NUP50-202ENST00000396096 C21orf33P30042 268 aaPredicted RBP15.85■□□□□ 0.13
NUP50-202ENST00000396096 CTSKP43235 329 aa15.85■□□□□ 0.13
NUP50-202ENST00000396096 CRISP3P54108 245 aa15.85■□□□□ 0.13
NUP50-202ENST00000396096 STXBP1P61764 594 aaKnown RBP15.85■□□□□ 0.13
NUP50-202ENST00000396096 ILKQ13418 452 aa15.85■□□□□ 0.13
NUP50-202ENST00000396096 GNA13Q14344 377 aa15.85■□□□□ 0.13
NUP50-202ENST00000396096 DGUOKQ16854 277 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms