RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 ZFAND5O76080 213 aa4.26□□□□□ -1.73
HMGB1P10-201ENST00000395823 AMBPP02760 352 aa4.26□□□□□ -1.73
HMGB1P10-201ENST00000395823 FHP07954 510 aa4.26□□□□□ -1.73
HMGB1P10-201ENST00000395823 TMOD1P28289 359 aa4.26□□□□□ -1.73
HMGB1P10-201ENST00000395823 ADSSP30520 456 aa4.26□□□□□ -1.73
HMGB1P10-201ENST00000395823 TRIM23P36406 574 aa4.26□□□□□ -1.73
HMGB1P10-201ENST00000395823 RPS4XP62701 263 aaKnown RBP4.26□□□□□ -1.73
HMGB1P10-201ENST00000395823 BTG3Q14201 252 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P10-201ENST00000395823 FAM72AQ5TYM5 149 aa4.26□□□□□ -1.73
HMGB1P10-201ENST00000395823 FAM72DQ6L9T8 149 aa4.26□□□□□ -1.73
HMGB1P10-201ENST00000395823 NOTCH2NLQ7Z3S9 236 aa4.26□□□□□ -1.73
HMGB1P10-201ENST00000395823 PPP1R42Q7Z4L9 355 aa4.26□□□□□ -1.73
HMGB1P10-201ENST00000395823 FAM72BQ86X60 149 aa4.26□□□□□ -1.73
HMGB1P10-201ENST00000395823 GRAMD2AQ8IUY3 354 aa4.26□□□□□ -1.73
HMGB1P10-201ENST00000395823 TBC1D21Q8IYX1 336 aa4.26□□□□□ -1.73
HMGB1P10-201ENST00000395823 CCDC51Q96ER9 411 aa4.26□□□□□ -1.73
HMGB1P10-201ENST00000395823 GMPPAQ96IJ6 420 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P10-201ENST00000395823 CAPNS2Q96L46 248 aa4.26□□□□□ -1.73
HMGB1P10-201ENST00000395823 INPP4AQ96PE3 977 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P10-201ENST00000395823 NDUFAF3Q9BU61 184 aa4.26□□□□□ -1.73
HMGB1P10-201ENST00000395823 MTHFD2LQ9H903 347 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P10-201ENST00000395823 VAT1LQ9HCJ6 419 aa4.26□□□□□ -1.73
HMGB1P10-201ENST00000395823 CENPMQ9NSP4 180 aa4.26□□□□□ -1.73
HMGB1P10-201ENST00000395823 KLHL8Q9P2G9 620 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P10-201ENST00000395823 KLK11Q9UBX7 282 aa4.26□□□□□ -1.73
HMGB1P10-201ENST00000395823 CTNNA3Q9UI47 895 aa4.26□□□□□ -1.73
HMGB1P10-201ENST00000395823 LNPEPQ9UIQ6 1025 aa4.26□□□□□ -1.73
HMGB1P10-201ENST00000395823 ERRFI1Q9UJM3 462 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P10-201ENST00000395823 LAMP5Q9UJQ1 280 aa4.26□□□□□ -1.73
HMGB1P10-201ENST00000395823 FOXJ3Q9UPW0 622 aa4.26□□□□□ -1.73
HMGB1P10-201ENST00000395823 SLC6A5Q9Y345 797 aa4.26□□□□□ -1.73
HMGB1P10-201ENST00000395823 MRPS18CQ9Y3D5 142 aaKnown RBP4.26□□□□□ -1.73
HMGB1P10-201ENST00000395823 ZNF175Q9Y473 711 aa4.26□□□□□ -1.73
HMGB1P10-201ENST00000395823 MEI4A8MW99 385 aa4.25□□□□□ -1.73
HMGB1P10-201ENST00000395823 FAM25EA8MYX2 175 aa4.25□□□□□ -1.73
HMGB1P10-201ENST00000395823 SLCO1B7G3V0H7 640 aa4.25□□□□□ -1.73
HMGB1P10-201ENST00000395823 LGALS8O00214 317 aa4.25□□□□□ -1.73
HMGB1P10-201ENST00000395823 TNFSF12O43508 249 aa4.25□□□□□ -1.73
HMGB1P10-201ENST00000395823 TOM1L1O75674 476 aa4.25□□□□□ -1.73
HMGB1P10-201ENST00000395823 NXPH4O95158 308 aa4.25□□□□□ -1.73
HMGB1P10-201ENST00000395823 FCER2P06734 321 aa4.25□□□□□ -1.73
HMGB1P10-201ENST00000395823 RRASP10301 218 aa4.25□□□□□ -1.73
HMGB1P10-201ENST00000395823 KRT13P13646 458 aa4.25□□□□□ -1.73
HMGB1P10-201ENST00000395823 FCGR2BP31994 310 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P10-201ENST00000395823 MMP12P39900 470 aa4.25□□□□□ -1.73
HMGB1P10-201ENST00000395823 ZFP36L2P47974 494 aaKnown RBP4.25□□□□□ -1.73
HMGB1P10-201ENST00000395823 LRRC74AQ0VAA2 488 aa4.25□□□□□ -1.73
HMGB1P10-201ENST00000395823 IFT88Q13099 833 aa4.25□□□□□ -1.73
HMGB1P10-201ENST00000395823 NME3Q13232 169 aa4.25□□□□□ -1.73
HMGB1P10-201ENST00000395823 FAM189A2Q15884 450 aa4.25□□□□□ -1.73
HMGB1P10-201ENST00000395823 ZNF699Q32M78 642 aa4.25□□□□□ -1.73
HMGB1P10-201ENST00000395823 LRIT3Q3SXY7 679 aa4.25□□□□□ -1.73
HMGB1P10-201ENST00000395823 ZNF876PQ49A33 203 aa4.25□□□□□ -1.73
HMGB1P10-201ENST00000395823 TEX35Q5T0J7 233 aa4.25□□□□□ -1.73
HMGB1P10-201ENST00000395823 STEAP1BQ6NZ63 245 aa4.25□□□□□ -1.73
HMGB1P10-201ENST00000395823 MISPQ8IVT2 679 aa4.25□□□□□ -1.73
HMGB1P10-201ENST00000395823 CHDHQ8NE62 594 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P10-201ENST00000395823 OR2T34Q8NGX1 318 aa4.25□□□□□ -1.73
HMGB1P10-201ENST00000395823 C11orf45Q8TAV5 145 aa4.25□□□□□ -1.73
HMGB1P10-201ENST00000395823 RDH11Q8TC12 318 aa4.25□□□□□ -1.73
HMGB1P10-201ENST00000395823 MAGED4Q96JG8 741 aa4.25□□□□□ -1.73
HMGB1P10-201ENST00000395823 EPYCQ99645 322 aa4.25□□□□□ -1.73
HMGB1P10-201ENST00000395823 ERP44Q9BS26 406 aa4.25□□□□□ -1.73
HMGB1P10-201ENST00000395823 ZNF416Q9BWM5 594 aa4.25□□□□□ -1.73
HMGB1P10-201ENST00000395823 FAM124BQ9H5Z6 455 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P10-201ENST00000395823 PLEKHA3Q9HB20 300 aa4.25□□□□□ -1.73
HMGB1P10-201ENST00000395823 PALMDQ9NP74 551 aa4.25□□□□□ -1.73
HMGB1P10-201ENST00000395823 UBE2TQ9NPD8 197 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P10-201ENST00000395823 IL1RAPQ9NPH3 570 aa4.25□□□□□ -1.73
HMGB1P10-201ENST00000395823 PLCXD1Q9NUJ7 323 aa4.25□□□□□ -1.73
HMGB1P10-201ENST00000395823 ATAD3AQ9NVI7 634 aa4.25□□□□□ -1.73
HMGB1P10-201ENST00000395823 WIPI2Q9Y4P8 454 aa4.25□□□□□ -1.73
HMGB1P10-201ENST00000395823 LOC390937A0A1W2PQ73 354 aa4.24□□□□□ -1.73
HMGB1P10-201ENST00000395823 MEIOCA2RUB1 952 aa4.24□□□□□ -1.73
HMGB1P10-201ENST00000395823 IFITM10A6NMD0 228 aa4.24□□□□□ -1.73
HMGB1P10-201ENST00000395823 ANKRD30BLA7E2S9 258 aa4.24□□□□□ -1.73
HMGB1P10-201ENST00000395823 ZNF724A8MTY0 619 aa4.24□□□□□ -1.73
HMGB1P10-201ENST00000395823 KRTAP29-1A8MX34 341 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P10-201ENST00000395823 HHLA1C9JL84 531 aa4.24□□□□□ -1.73
HMGB1P10-201ENST00000395823 K7EQD1 137 aa4.24□□□□□ -1.73
HMGB1P10-201ENST00000395823 TSPAN2O60636 221 aa4.24□□□□□ -1.73
HMGB1P10-201ENST00000395823 NDUFA7O95182 113 aa4.24□□□□□ -1.73
HMGB1P10-201ENST00000395823 KRT8P05787 483 aa4.24□□□□□ -1.73
HMGB1P10-201ENST00000395823 CA3P07451 260 aa4.24□□□□□ -1.73
HMGB1P10-201ENST00000395823 GP9P14770 177 aa4.24□□□□□ -1.73
HMGB1P10-201ENST00000395823 RPS2P15880 293 aaKnown RBP4.24□□□□□ -1.73
HMGB1P10-201ENST00000395823 PAICSP22234 425 aaKnown RBP4.24□□□□□ -1.73
HMGB1P10-201ENST00000395823 PTPN6P29350 595 aa4.24□□□□□ -1.73
HMGB1P10-201ENST00000395823 SOX6P35712 828 aa4.24□□□□□ -1.73
HMGB1P10-201ENST00000395823 ID1P41134 155 aa4.24□□□□□ -1.73
HMGB1P10-201ENST00000395823 TSFMP43897 325 aaKnown RBP4.24□□□□□ -1.73
HMGB1P10-201ENST00000395823 NDST1P52848 882 aa4.24□□□□□ -1.73
HMGB1P10-201ENST00000395823 SNRPD1P62314 119 aaKnown RBP4.24□□□□□ -1.73
HMGB1P10-201ENST00000395823 MAP2K1Q02750 393 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P10-201ENST00000395823 RBBP4Q09028 425 aa4.24□□□□□ -1.73
HMGB1P10-201ENST00000395823 COX10Q12887 443 aa4.24□□□□□ -1.73
HMGB1P10-201ENST00000395823 SLC17A1Q14916 467 aa4.24□□□□□ -1.73
HMGB1P10-201ENST00000395823 ACSF3Q4G176 576 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P10-201ENST00000395823 TMEM41BQ5BJD5 291 aa4.24□□□□□ -1.73
HMGB1P10-201ENST00000395823 C1orf189Q5VU69 101 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms