RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 ATG9BQ674R7 924 aa9.94□□□□□ -0.82
COL4A6-203ENST00000394872 RAB12Q6IQ22 244 aa9.94□□□□□ -0.82
COL4A6-203ENST00000394872 NANOGP8Q6NSW7 305 aa9.94□□□□□ -0.82
COL4A6-203ENST00000394872 NLGN4YQ8NFZ3 816 aaPredicted RBP9.94□□□□□ -0.82
COL4A6-203ENST00000394872 AKAP1Q92667 903 aaKnown RBP eCLIP9.94□□□□□ -0.82
COL4A6-203ENST00000394872 TRIM43Q96BQ3 446 aaPredicted RBP9.94□□□□□ -0.82
COL4A6-203ENST00000394872 DDIT4LQ96D03 193 aa9.94□□□□□ -0.82
COL4A6-203ENST00000394872 CPEB1Q9BZB8 566 aaKnown RBP9.94□□□□□ -0.82
COL4A6-203ENST00000394872 NANOGQ9H9S0 305 aa9.94□□□□□ -0.82
COL4A6-203ENST00000394872 SRA1Q9HD15 236 aaKnown RBP9.94□□□□□ -0.82
COL4A6-203ENST00000394872 TREM1Q9NP99 234 aa9.94□□□□□ -0.82
COL4A6-203ENST00000394872 ZNF701Q9NV72 531 aaPredicted RBP9.94□□□□□ -0.82
COL4A6-203ENST00000394872 SCP2D1Q9UJQ7 156 aa9.94□□□□□ -0.82
COL4A6-203ENST00000394872 PRELID1Q9Y255 219 aa9.94□□□□□ -0.82
COL4A6-203ENST00000394872 ANXA3P12429 323 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 BPIP17213 487 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 DRD1P21728 446 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 HNRNPA2B1P22626 353 aaKnown RBP9.93□□□□□ -0.82
COL4A6-203ENST00000394872 CFL1P23528 166 aaKnown RBP9.93□□□□□ -0.82
COL4A6-203ENST00000394872 ADH7P40394 386 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 DSC1Q08554 894 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 PTGR1Q14914 329 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 CLCA4Q14CN2 919 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 EIF5AL1Q6IS14 154 aaKnown RBP9.93□□□□□ -0.82
COL4A6-203ENST00000394872 SHQ1Q6PI26 577 aaKnown RBP9.93□□□□□ -0.82
COL4A6-203ENST00000394872 TSPAN33Q86UF1 283 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 OR8J3Q8NGG0 315 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 OR14L1PQ8NHC6 308 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 HUS1BQ8NHY5 278 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 ZUFSPQ96AP4 578 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 PIP5K1AQ99755 562 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 AKAP12Q02952 1782 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 A8MVJ9 347 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 BHMG1C9JSJ3 638 aaPredicted RBP9.93□□□□□ -0.82
COL4A6-203ENST00000394872 ATE1O95260 518 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 HTRA3P83110 453 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 MLC1Q15049 377 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 EXOC3L2Q2M3D2 409 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 DEFB110Q30KQ9 67 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 TUBA3EQ6PEY2 450 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 C6orf120Q7Z4R8 191 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 SLC37A3Q8NCC5 494 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 SGTBQ96EQ0 304 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 DOHHQ9BU89 302 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 ATG5Q9H1Y0 275 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 RDH8Q9NYR8 311 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 SCML1Q9UN30 329 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 TRIM64BA6NI03 449 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 PLATP00750 562 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 MAGEA2P43356 314 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 FADDQ13158 208 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 GRB7Q14451 532 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 TCTE1Q5JU00 501 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 CES4AQ5XG92 561 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 UNC5DQ6UXZ4 953 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 ZNF440Q8IYI8 595 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 LRRC20Q8TCA0 184 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 CASTOR1Q8WTX7 329 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 FCAMRQ8WWV6 532 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 KCNN1Q92952 543 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 HHIPQ96QV1 700 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 MTMR10Q9NXD2 777 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 FBXL3Q9UKT7 428 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 M0R129 80 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 IFNA7P01567 189 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 FGF3P11487 239 aaPredicted RBP9.93□□□□□ -0.82
COL4A6-203ENST00000394872 AK4P27144 223 aaPredicted RBP9.93□□□□□ -0.82
COL4A6-203ENST00000394872 SNU13P55769 128 aaKnown RBP9.93□□□□□ -0.82
COL4A6-203ENST00000394872 FXYD6P3P58550 94 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 BNIP3Q12983 259 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 GTF2IRD2BQ6EKJ0 949 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 SLC27A4Q6P1M0 643 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 FAM43BQ6ZT52 329 aaPredicted RBP9.93□□□□□ -0.82
COL4A6-203ENST00000394872 GTF2IRD2Q86UP8 949 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 ZNF709Q8N972 641 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 CHST14Q8NCH0 376 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 HS6ST2Q96MM7 605 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 ENAMQ9NRM1 1142 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 FTCDNL1E5RQL4 147 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 RTCAO00442 366 aaKnown RBP9.93□□□□□ -0.82
COL4A6-203ENST00000394872 PROS1P07225 676 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 GRPRP30550 384 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 PSMA6P60900 246 aaKnown RBP9.93□□□□□ -0.82
COL4A6-203ENST00000394872 RPS26P62854 115 aaKnown RBP9.93□□□□□ -0.82
COL4A6-203ENST00000394872 HSD11B2P80365 405 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 NR0B2Q15466 257 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 LRFN4Q6PJG9 635 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 ZNF517Q6ZMY9 492 aaPredicted RBP9.93□□□□□ -0.82
COL4A6-203ENST00000394872 ZNF559Q9BR84 538 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 H3BQ06 376 aaPredicted RBP9.93□□□□□ -0.82
COL4A6-203ENST00000394872 M0R036 132 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 KCNJ13O60928 360 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 FASLGP48023 281 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 SLC10A2Q12908 348 aaPredicted RBP9.93□□□□□ -0.82
COL4A6-203ENST00000394872 HNRNPA0Q13151 305 aaKnown RBP9.93□□□□□ -0.82
COL4A6-203ENST00000394872 CLLU1OSQ5K130 101 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 ARSKQ6UWY0 536 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 SPRYD4Q8WW59 207 aaPredicted RBP9.93□□□□□ -0.82
COL4A6-203ENST00000394872 NEDD4LQ96PU5 975 aa9.93□□□□□ -0.82
COL4A6-203ENST00000394872 PITX2Q99697 317 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms