RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 BARHL1Q9BZE3 327 aa12.78□□□□□ -0.36
GTF2F1-201ENST00000394456 QRSL1Q9H0R6 528 aaKnown RBP12.78□□□□□ -0.36
GTF2F1-201ENST00000394456 HHATLQ9HCP6 504 aa12.78□□□□□ -0.36
GTF2F1-201ENST00000394456 IGLON5A6NGN9 336 aa12.78□□□□□ -0.36
GTF2F1-201ENST00000394456 C1QTNF3-AMACRE9PGA6 284 aa12.78□□□□□ -0.36
GTF2F1-201ENST00000394456 H3BN98 237 aa12.78□□□□□ -0.36
GTF2F1-201ENST00000394456 HMGN4O00479 90 aa12.78□□□□□ -0.36
GTF2F1-201ENST00000394456 AP3D1O14617 1153 aa12.78□□□□□ -0.36
GTF2F1-201ENST00000394456 MID1O15344 667 aa12.78□□□□□ -0.36
GTF2F1-201ENST00000394456 OR10H3O60404 316 aa12.78□□□□□ -0.36
GTF2F1-201ENST00000394456 MRPS14O60783 128 aaKnown RBP12.78□□□□□ -0.36
GTF2F1-201ENST00000394456 MFN2O95140 757 aa12.78□□□□□ -0.36
GTF2F1-201ENST00000394456 RHCEP18577 417 aa12.78□□□□□ -0.36
GTF2F1-201ENST00000394456 TNNI3P19429 210 aa12.78□□□□□ -0.36
GTF2F1-201ENST00000394456 PTNP21246 168 aa12.78□□□□□ -0.36
GTF2F1-201ENST00000394456 NR4A2P43354 598 aa12.78□□□□□ -0.36
GTF2F1-201ENST00000394456 HMGA2P52926 109 aa12.78□□□□□ -0.36
GTF2F1-201ENST00000394456 KCNJ8Q15842 424 aa12.78□□□□□ -0.36
GTF2F1-201ENST00000394456 SYCE2Q6PIF2 218 aa12.78□□□□□ -0.36
GTF2F1-201ENST00000394456 C6orf120Q7Z4R8 191 aa12.78□□□□□ -0.36
GTF2F1-201ENST00000394456 FGF14Q92915 247 aa12.78□□□□□ -0.36
GTF2F1-201ENST00000394456 AICDAQ9GZX7 198 aa12.78□□□□□ -0.36
GTF2F1-201ENST00000394456 SIAEQ9HAT2 523 aa12.78□□□□□ -0.36
GTF2F1-201ENST00000394456 THAP10Q9P2Z0 257 aaPredicted RBP12.78□□□□□ -0.36
GTF2F1-201ENST00000394456 KMOO15229 486 aa12.77□□□□□ -0.36
GTF2F1-201ENST00000394456 PCDH8O95206 1070 aa12.77□□□□□ -0.36
GTF2F1-201ENST00000394456 OR12D1P0DN82 309 aa12.77□□□□□ -0.36
GTF2F1-201ENST00000394456 UQCRC2P22695 453 aa12.77□□□□□ -0.36
GTF2F1-201ENST00000394456 ELAVL4P26378 380 aaKnown RBP12.77□□□□□ -0.36
GTF2F1-201ENST00000394456 GDI1P31150 447 aa12.77□□□□□ -0.36
GTF2F1-201ENST00000394456 CDC42P60953 191 aa12.77□□□□□ -0.36
GTF2F1-201ENST00000394456 CSNK2BP67870 215 aa12.77□□□□□ -0.36
GTF2F1-201ENST00000394456 SPDYE7PQ495Y7 208 aa12.77□□□□□ -0.36
GTF2F1-201ENST00000394456 PIP5KL1Q5T9C9 394 aa12.77□□□□□ -0.36
GTF2F1-201ENST00000394456 PARM1Q6UWI2 310 aa12.77□□□□□ -0.36
GTF2F1-201ENST00000394456 UBE3DQ7Z6J8 389 aa12.77□□□□□ -0.36
GTF2F1-201ENST00000394456 DEPDC4Q8N2C3 294 aa12.77□□□□□ -0.36
GTF2F1-201ENST00000394456 TFGQ92734 400 aaPredicted RBP12.77□□□□□ -0.36
GTF2F1-201ENST00000394456 PDXPQ96GD0 296 aa12.77□□□□□ -0.36
GTF2F1-201ENST00000394456 NXF2Q9GZY0 626 aaKnown RBP12.77□□□□□ -0.36
GTF2F1-201ENST00000394456 TPK1Q9H3S4 243 aa12.77□□□□□ -0.36
GTF2F1-201ENST00000394456 SERGEFQ9UGK8 458 aa12.77□□□□□ -0.36
GTF2F1-201ENST00000394456 PRR23AA6NEV1 266 aa12.77□□□□□ -0.37
GTF2F1-201ENST00000394456 C4orf51C9J302 202 aa12.77□□□□□ -0.37
GTF2F1-201ENST00000394456 TLR4O00206 839 aa12.77□□□□□ -0.37
GTF2F1-201ENST00000394456 ITGA2P17301 1181 aa12.77□□□□□ -0.37
GTF2F1-201ENST00000394456 AZGP1P25311 298 aaKnown RBP12.77□□□□□ -0.37
GTF2F1-201ENST00000394456 SERPINB1P30740 379 aa12.77□□□□□ -0.37
GTF2F1-201ENST00000394456 DRD3P35462 400 aa12.77□□□□□ -0.37
GTF2F1-201ENST00000394456 RPS19P39019 145 aaKnown RBP12.77□□□□□ -0.37
GTF2F1-201ENST00000394456 PRKAG1P54619 331 aa12.77□□□□□ -0.37
GTF2F1-201ENST00000394456 SEC13P55735 322 aa12.77□□□□□ -0.37
GTF2F1-201ENST00000394456 TUBA1BP68363 451 aa12.77□□□□□ -0.37
GTF2F1-201ENST00000394456 MXD1Q05195 221 aa12.77□□□□□ -0.37
GTF2F1-201ENST00000394456 DPTQ07507 201 aa12.77□□□□□ -0.37
GTF2F1-201ENST00000394456 TMEM52BQ4KMG9 183 aa12.77□□□□□ -0.37
GTF2F1-201ENST00000394456 KHDRBS2Q5VWX1 349 aaKnown RBP12.77□□□□□ -0.37
GTF2F1-201ENST00000394456 SAXO2Q658L1 398 aa12.77□□□□□ -0.37
GTF2F1-201ENST00000394456 PLAG1Q6DJT9 500 aa12.77□□□□□ -0.37
GTF2F1-201ENST00000394456 TUBA1AQ71U36 451 aa12.77□□□□□ -0.37
GTF2F1-201ENST00000394456 ZNF765Q7L2R6 523 aa12.77□□□□□ -0.37
GTF2F1-201ENST00000394456 SLC34A3Q8N130 599 aa12.77□□□□□ -0.37
GTF2F1-201ENST00000394456 AMER2Q8N7J2 671 aa12.77□□□□□ -0.37
GTF2F1-201ENST00000394456 TCEANCQ8N8B7 351 aa12.77□□□□□ -0.37
GTF2F1-201ENST00000394456 TP53I13Q8NBR0 393 aaPredicted RBP12.77□□□□□ -0.37
GTF2F1-201ENST00000394456 SLC7A13Q8TCU3 470 aa12.77□□□□□ -0.37
GTF2F1-201ENST00000394456 KLK6Q92876 244 aa12.77□□□□□ -0.37
GTF2F1-201ENST00000394456 EPHX3Q9H6B9 360 aa12.77□□□□□ -0.37
GTF2F1-201ENST00000394456 TRPV4Q9HBA0 871 aa12.77□□□□□ -0.37
GTF2F1-201ENST00000394456 ANKMY1Q9P2S6 941 aa12.77□□□□□ -0.37
GTF2F1-201ENST00000394456 CARD8Q9Y2G2 431 aa12.77□□□□□ -0.37
GTF2F1-201ENST00000394456 YARS2Q9Y2Z4 477 aaKnown RBP12.77□□□□□ -0.37
GTF2F1-201ENST00000394456 C5orf58C9J3I9 102 aa12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 FRS3O43559 492 aa12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 KRT75O95678 551 aa12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 HBQ1P09105 142 aa12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 DDCP20711 480 aa12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 PTX3P26022 381 aaPredicted RBP12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 DUSP2Q05923 314 aa12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 FLYWCH1Q4VC44 716 aa12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 ZNF362Q5T0B9 420 aaPredicted RBP12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 ATAD3BQ5T9A4 648 aa12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 HOMEZQ8IX15 550 aa12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 SLC7A5P1Q8MH63 180 aa12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 FBXO15Q8NCQ5 510 aaPredicted RBP12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 OR2L2Q8NH16 312 aa12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 XAGE5Q8WWM1 108 aa12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 TMEM203Q969S6 136 aa12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 KLHL31Q9H511 634 aa12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 SYNPO2LQ9H987 977 aa12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 KCND3Q9UK17 655 aa12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 WDR37Q9Y2I8 494 aa12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 KLHL20Q9Y2M5 609 aa12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 PCDHGB6Q9Y5F9 930 aa12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 STON1Q9Y6Q2 735 aa12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 CSO75390 466 aaKnown RBP12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 EPPINO95925 133 aa12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 TP53P04637 393 aaPredicted RBP12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 ALOX5P09917 674 aa12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 SLC15A1P46059 708 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms