RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 DKK3Q9UBP4 350 aa13.22□□□□□ -0.29
GAPVD1-205ENST00000394084 RPL36Q9Y3U8 105 aaKnown RBP13.22□□□□□ -0.29
GAPVD1-205ENST00000394084 V9GYH0 126 aa13.22□□□□□ -0.29
GAPVD1-205ENST00000394084 H7BY64 318 aa13.22□□□□□ -0.29
GAPVD1-205ENST00000394084 FAAHO00519 579 aa13.22□□□□□ -0.29
GAPVD1-205ENST00000394084 PLD2O14939 933 aa13.22□□□□□ -0.29
GAPVD1-205ENST00000394084 PPM1DO15297 605 aa13.22□□□□□ -0.29
GAPVD1-205ENST00000394084 NME6O75414 186 aaPredicted RBP13.22□□□□□ -0.29
GAPVD1-205ENST00000394084 ACADLP28330 430 aa13.22□□□□□ -0.29
GAPVD1-205ENST00000394084 ST8SIA6P61647 398 aa13.22□□□□□ -0.29
GAPVD1-205ENST00000394084 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.22□□□□□ -0.29
GAPVD1-205ENST00000394084 ZNF697Q5TEC3 545 aa13.22□□□□□ -0.29
GAPVD1-205ENST00000394084 USP30Q70CQ3 517 aa13.22□□□□□ -0.29
GAPVD1-205ENST00000394084 C12orf40Q86WS4 652 aa13.22□□□□□ -0.29
GAPVD1-205ENST00000394084 LSRQ86X29 649 aaPredicted RBP13.22□□□□□ -0.29
GAPVD1-205ENST00000394084 FAM129CQ86XR2 697 aa13.22□□□□□ -0.29
GAPVD1-205ENST00000394084 SLC30A8Q8IWU4 369 aa13.22□□□□□ -0.29
GAPVD1-205ENST00000394084 NRSN1Q8IZ57 195 aa13.22□□□□□ -0.29
GAPVD1-205ENST00000394084 AMER3Q8N944 861 aa13.22□□□□□ -0.29
GAPVD1-205ENST00000394084 FLCNQ8NFG4 579 aa13.22□□□□□ -0.29
GAPVD1-205ENST00000394084 ARRDC3Q96B67 414 aa13.22□□□□□ -0.29
GAPVD1-205ENST00000394084 PRAP1Q96NZ9 151 aa13.22□□□□□ -0.29
GAPVD1-205ENST00000394084 YIPF4Q9BSR8 244 aa13.22□□□□□ -0.29
GAPVD1-205ENST00000394084 YIPF2Q9BWQ6 316 aa13.22□□□□□ -0.29
GAPVD1-205ENST00000394084 ZDHHC4Q9NPG8 344 aa13.22□□□□□ -0.29
GAPVD1-205ENST00000394084 TMEM39AQ9NV64 488 aa13.22□□□□□ -0.29
GAPVD1-205ENST00000394084 SEC14L4Q9UDX3 406 aa13.22□□□□□ -0.29
GAPVD1-205ENST00000394084 ZNF221Q9UK13 617 aa13.22□□□□□ -0.29
GAPVD1-205ENST00000394084 STUB1Q9UNE7 303 aa13.22□□□□□ -0.29
GAPVD1-205ENST00000394084 ICKQ9UPZ9 632 aa13.22□□□□□ -0.29
GAPVD1-205ENST00000394084 YARS2Q9Y2Z4 477 aaKnown RBP13.22□□□□□ -0.29
GAPVD1-205ENST00000394084 PRAMEF27A3QJZ7 478 aa13.21□□□□□ -0.29
GAPVD1-205ENST00000394084 UGT2B17O75795 530 aa13.21□□□□□ -0.29
GAPVD1-205ENST00000394084 RHOP08100 348 aa13.21□□□□□ -0.29
GAPVD1-205ENST00000394084 ALPPL2P10696 532 aa13.21□□□□□ -0.29
GAPVD1-205ENST00000394084 KCNJ5P48544 419 aa13.21□□□□□ -0.29
GAPVD1-205ENST00000394084 PLPP4Q5VZY2 271 aa13.21□□□□□ -0.29
GAPVD1-205ENST00000394084 C12orf73Q69YU5 71 aa13.21□□□□□ -0.29
GAPVD1-205ENST00000394084 PODNL1Q6PEZ8 512 aa13.21□□□□□ -0.29
GAPVD1-205ENST00000394084 C17orf64Q86WR6 236 aa13.21□□□□□ -0.29
GAPVD1-205ENST00000394084 TRIM69Q86WT6 500 aa13.21□□□□□ -0.29
GAPVD1-205ENST00000394084 OR8J1Q8NGP2 316 aa13.21□□□□□ -0.29
GAPVD1-205ENST00000394084 SMPDL3AQ92484 453 aa13.21□□□□□ -0.29
GAPVD1-205ENST00000394084 SIRT3Q9NTG7 399 aaPredicted RBP13.21□□□□□ -0.29
GAPVD1-205ENST00000394084 SSR3Q9UNL2 185 aa13.21□□□□□ -0.29
GAPVD1-205ENST00000394084 TMPRSS11DO60235 418 aa13.21□□□□□ -0.3
GAPVD1-205ENST00000394084 FHP07954 510 aa13.21□□□□□ -0.3
GAPVD1-205ENST00000394084 BSGP35613 385 aa13.21□□□□□ -0.3
GAPVD1-205ENST00000394084 PPM1AP35813 382 aa13.21□□□□□ -0.3
GAPVD1-205ENST00000394084 HTR3AP46098 478 aa13.21□□□□□ -0.3
GAPVD1-205ENST00000394084 CCT3P49368 545 aaKnown RBP13.21□□□□□ -0.3
GAPVD1-205ENST00000394084 PRKAG1P54619 331 aa13.21□□□□□ -0.3
GAPVD1-205ENST00000394084 WDR5P61964 334 aaKnown RBP13.21□□□□□ -0.3
GAPVD1-205ENST00000394084 NCF4Q15080 339 aa13.21□□□□□ -0.3
GAPVD1-205ENST00000394084 ZNF77Q15935 545 aa13.21□□□□□ -0.3
GAPVD1-205ENST00000394084 ZNF79Q15937 498 aa13.21□□□□□ -0.3
GAPVD1-205ENST00000394084 ATAD3CQ5T2N8 411 aa13.21□□□□□ -0.3
GAPVD1-205ENST00000394084 MFSD4BQ5TF39 518 aa13.21□□□□□ -0.3
GAPVD1-205ENST00000394084 C22orf42Q6IC83 251 aa13.21□□□□□ -0.3
GAPVD1-205ENST00000394084 UBE2J2Q8N2K1 259 aa13.21□□□□□ -0.3
GAPVD1-205ENST00000394084 NANOGP1Q8N7R0 232 aa13.21□□□□□ -0.3
GAPVD1-205ENST00000394084 RAD51AP1Q96B01 352 aa13.21□□□□□ -0.3
GAPVD1-205ENST00000394084 TMCO6Q96DC7 493 aa13.21□□□□□ -0.3
GAPVD1-205ENST00000394084 ZNF354BQ96LW1 612 aa13.21□□□□□ -0.3
GAPVD1-205ENST00000394084 TREX2Q9BQ50 279 aaPredicted RBP13.21□□□□□ -0.3
GAPVD1-205ENST00000394084 MMP28Q9H239 520 aa13.21□□□□□ -0.3
GAPVD1-205ENST00000394084 EPHX3Q9H6B9 360 aa13.21□□□□□ -0.3
GAPVD1-205ENST00000394084 C3orf14Q9HBI5 128 aa13.21□□□□□ -0.3
GAPVD1-205ENST00000394084 TM7SF3Q9NS93 570 aa13.21□□□□□ -0.3
GAPVD1-205ENST00000394084 SAGE1Q9NXZ1 904 aa13.21□□□□□ -0.3
GAPVD1-205ENST00000394084 MTCL1Q9Y4B5 1905 aaKnown RBP13.21□□□□□ -0.3
GAPVD1-205ENST00000394084 A0A1W2PQ09 198 aa13.2□□□□□ -0.3
GAPVD1-205ENST00000394084 IDH3BO43837 385 aa13.2□□□□□ -0.3
GAPVD1-205ENST00000394084 PRKRAO75569 313 aaKnown RBP13.2□□□□□ -0.3
GAPVD1-205ENST00000394084 RFX2P48378 723 aa13.2□□□□□ -0.3
GAPVD1-205ENST00000394084 ERVFC1P60507 584 aa13.2□□□□□ -0.3
GAPVD1-205ENST00000394084 GINS1Q14691 196 aa13.2□□□□□ -0.3
GAPVD1-205ENST00000394084 ARHGAP15Q53QZ3 475 aa13.2□□□□□ -0.3
GAPVD1-205ENST00000394084 ATAT1Q5SQI0 421 aa13.2□□□□□ -0.3
GAPVD1-205ENST00000394084 MEDAGQ5VYS4 303 aa13.2□□□□□ -0.3
GAPVD1-205ENST00000394084 IQCHQ86VS3 1027 aa13.2□□□□□ -0.3
GAPVD1-205ENST00000394084 PHC2Q8IXK0 858 aa13.2□□□□□ -0.3
GAPVD1-205ENST00000394084 UBQLNLQ8IYU4 475 aa13.2□□□□□ -0.3
GAPVD1-205ENST00000394084 OR51I1Q9H343 314 aa13.2□□□□□ -0.3
GAPVD1-205ENST00000394084 N6AMT1Q9Y5N5 214 aa13.2□□□□□ -0.3
GAPVD1-205ENST00000394084 GLOD5A6NK44 160 aa13.2□□□□□ -0.3
GAPVD1-205ENST00000394084 ZNF670-ZNF695F2Z2N8 137 aa13.2□□□□□ -0.3
GAPVD1-205ENST00000394084 PAPLNO95428 1278 aa13.2□□□□□ -0.3
GAPVD1-205ENST00000394084 NR2F1P10589 423 aa13.2□□□□□ -0.3
GAPVD1-205ENST00000394084 IL7P13232 177 aa13.2□□□□□ -0.3
GAPVD1-205ENST00000394084 CSF2RAP15509 400 aa13.2□□□□□ -0.3
GAPVD1-205ENST00000394084 GPC1P35052 558 aa13.2□□□□□ -0.3
GAPVD1-205ENST00000394084 PSPHP78330 225 aa13.2□□□□□ -0.3
GAPVD1-205ENST00000394084 HNRNPA0Q13151 305 aaKnown RBP13.2□□□□□ -0.3
GAPVD1-205ENST00000394084 C1DQ13901 141 aaKnown RBP13.2□□□□□ -0.3
GAPVD1-205ENST00000394084 ZNF544Q6NX49 715 aa13.2□□□□□ -0.3
GAPVD1-205ENST00000394084 LCTLQ6UWM7 567 aa13.2□□□□□ -0.3
GAPVD1-205ENST00000394084 FAM131AQ6UXB0 335 aa13.2□□□□□ -0.3
GAPVD1-205ENST00000394084 ZNF517Q6ZMY9 492 aaPredicted RBP13.2□□□□□ -0.3
GAPVD1-205ENST00000394084 ANKRD33Q7Z3H0 272 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms