RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 TM4SF5O14894 197 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 DHHO43323 396 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 SLC28A2O43868 658 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 NOBOXO60393 691 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 AVPP01185 164 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 KRT7P08729 469 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 IDO1P14902 403 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 PSMC3P17980 439 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 LCN1P31025 176 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 HNRNPH1P31943 449 aaKnown RBP3.34□□□□□ -1.88
XRN1-202ENST00000392981 HAAOP46952 286 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 OR3A3P47888 321 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 OR3A2P47893 321 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 PPIDQ08752 370 aaKnown RBP3.34□□□□□ -1.88
XRN1-202ENST00000392981 LCN1P1Q5VSP4 162 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 TERB1Q8NA31 727 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 OR13F1Q8NGS4 319 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 OCC1Q8TAD7 63 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 TMEM37Q8WXS4 190 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 GLYATL1Q969I3 302 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 TMEM45BQ96B21 275 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 VSTM2LQ96N03 204 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 CHID1Q9BWS9 393 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 PARD6BQ9BYG5 372 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 APMAPQ9HDC9 416 aa3.34□□□□□ -1.88
XRN1-202ENST00000392981 KTN1Q86UP2 1357 aaKnown RBP3.33□□□□□ -1.88
XRN1-202ENST00000392981 ARHGAP35Q9NRY4 1499 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 KIDINS220Q9ULH0 1771 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 H0YGN5 161 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 NDUFAB1O14561 156 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 TRDMT1O14717 391 aaKnown RBP3.33□□□□□ -1.88
XRN1-202ENST00000392981 KLF11O14901 512 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 ECI2O75521 394 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 ATP6V1G2O95670 118 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 UGT1A4P22310 534 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 UGT1A3P35503 534 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 UGT1A5P35504 534 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 MMP12P39900 470 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 ME1P48163 572 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 FHITP49789 147 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 SLC26A2P50443 739 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 CEBPGP53567 150 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 CDH4P55283 916 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 COL9A3Q14050 684 aaPredicted RBP3.33□□□□□ -1.88
XRN1-202ENST00000392981 SPA17Q15506 151 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 ZDHHC17Q8IUH5 632 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 WDR49Q8IV35 697 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 GABRG1Q8N1C3 465 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 PYROXD2Q8N2H3 581 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 ZNF786Q8N393 782 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.33□□□□□ -1.88
XRN1-202ENST00000392981 SLC44A1Q8WWI5 657 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 PHF21AQ96BD5 680 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 SERAC1Q96JX3 654 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 PLA2G12BQ9BX93 195 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 FAM49AQ9H0Q0 323 aaPredicted RBP3.33□□□□□ -1.88
XRN1-202ENST00000392981 OPN3Q9H1Y3 402 aaPredicted RBP3.33□□□□□ -1.88
XRN1-202ENST00000392981 SLC17A5Q9NRA2 495 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 GSN-AS1Q9NRJ2 163 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 PHPT1Q9NRX4 125 aaPredicted RBP3.33□□□□□ -1.88
XRN1-202ENST00000392981 ACOXLQ9NUZ1 547 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 MYEF2Q9P2K5 600 aaKnown RBP3.33□□□□□ -1.88
XRN1-202ENST00000392981 FOXJ3Q9UPW0 622 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 YBX2Q9Y2T7 364 aaKnown RBP3.33□□□□□ -1.88
XRN1-202ENST00000392981 PCDHAC2Q9Y5I4 1007 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 SBNO1A3KN83 1393 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 PCF11O94913 1555 aaKnown RBP3.33□□□□□ -1.88
XRN1-202ENST00000392981 OR6C75A6NL08 312 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 E9PMD0 336 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 ATP5LO75964 103 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 SERPINB2P05120 415 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 ITGB5P18084 799 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 DPP4P27487 766 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 ID1P41134 155 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 GNPDA1P46926 289 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 CLCN4P51793 760 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 STX3Q13277 289 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 DYNC1I2Q13409 638 aaKnown RBP3.33□□□□□ -1.88
XRN1-202ENST00000392981 ENTPD8Q5MY95 495 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 CLVS2Q5SYC1 327 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 ASRGL1Q7L266 308 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 MMD2Q8IY49 270 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 ZNF565Q8N9K5 539 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 COLGALT1Q8NBJ5 622 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 RNF149Q8NC42 400 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 SDR9C7Q8NEX9 313 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 PROKR2Q8NFJ6 384 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 OR5T1Q8NG75 326 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 OR51L1Q8NGJ5 315 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 OR6M1Q8NGM8 313 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 DNAJB3Q8WWF6 145 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 PPP1R36Q96LQ0 422 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 SLITRK1Q96PX8 696 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 C19orf43Q9BQ61 176 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 DCTPP1Q9H773 170 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 POLD4Q9HCU8 107 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 IL17RBQ9NRM6 502 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 B3GAT1Q9P2W7 334 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 FOXA2Q9Y261 457 aaPredicted RBP3.33□□□□□ -1.88
XRN1-202ENST00000392981 OR1A2Q9Y585 309 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms