RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 C9JVG2 144 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 ZBTB48P10074 688 aaPredicted RBP14.17□□□□□ -0.14
CCDC50-201ENST00000392455 RAB3BP20337 219 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 ABHD18Q0P651 414 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 SLC10A1Q14973 349 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 PPA1Q15181 289 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 QPCTQ16769 361 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 SLC18B1Q6NT16 456 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 NAA40Q86UY6 237 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 NKD2Q969F2 451 aaPredicted RBP14.17□□□□□ -0.14
CCDC50-201ENST00000392455 BIRC8Q96P09 236 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 ASB3Q9Y575 518 aa14.17□□□□□ -0.14
CCDC50-201ENST00000392455 FANCGO15287 622 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 HPRP00739 348 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 KIAA0930Q6ICG6 404 aaPredicted RBP14.16□□□□□ -0.14
CCDC50-201ENST00000392455 ZC3H14Q6PJT7 736 aaKnown RBP14.16□□□□□ -0.14
CCDC50-201ENST00000392455 OR5L2Q8NGL0 311 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 LENG8Q96PV6 779 aaPredicted RBP14.16□□□□□ -0.14
CCDC50-201ENST00000392455 GJD2Q9UKL4 321 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 A8MUI8 341 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 NFKBIEO00221 500 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 PLATP00750 562 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 CD9P21926 228 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 RHDQ02161 417 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 UPP1Q16831 310 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 TIGD5Q53EQ6 642 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 ZNF695Q8IW36 515 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 UHRF2Q96PU4 802 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 ZNF442Q9H7R0 627 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 BEST1O76090 585 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 IDH3AP50213 366 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 FABP6P51161 128 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 AMZ1Q400G9 498 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 SEMA6DQ8NFY4 1073 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 BSCL2Q96G97 398 aaPredicted RBP14.16□□□□□ -0.14
CCDC50-201ENST00000392455 HBEGFQ99075 208 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 ADAM19Q9H013 955 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 GPN2Q9H9Y4 310 aaPredicted RBP14.16□□□□□ -0.14
CCDC50-201ENST00000392455 ADAP2Q9NPF8 381 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 PLA2G16P53816 162 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 PLD6Q8N2A8 252 aaKnown RBP14.16□□□□□ -0.14
CCDC50-201ENST00000392455 TBX5Q99593 518 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 MINDY3Q9H8M7 445 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 IL26Q9NPH9 171 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 LTN1O94822 1766 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 TPRP12270 2363 aaKnown RBP14.16□□□□□ -0.14
CCDC50-201ENST00000392455 A0A1W2PPL8 197 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 FAAHO00519 579 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 P2RX1P51575 399 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 GABARAPL2P60520 117 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 NPAS4Q8IUM7 802 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 ZNF681Q96N22 645 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 TSSK2Q96PF2 358 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 PAPOLGQ9BWT3 736 aaKnown RBP14.16□□□□□ -0.14
CCDC50-201ENST00000392455 SLC6A17Q9H1V8 727 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 WDR26Q9H7D7 661 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 ZNF446Q9NWS9 450 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 C2orf42Q9NWW7 574 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 FAM170BA6NMN3 283 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 C17orf112F2Z3M2 114 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 ZNF30P17039 623 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 MAP2K4P45985 399 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 NXPE4Q6UWF7 544 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 ALG3Q92685 438 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 PRRT1Q99946 306 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 GCM1Q9NP62 436 aa14.16□□□□□ -0.14
CCDC50-201ENST00000392455 EIF2B4Q9UI10 523 aaKnown RBP14.16□□□□□ -0.14
CCDC50-201ENST00000392455 NUP214P35658 2090 aaPredicted RBP14.15□□□□□ -0.14
CCDC50-201ENST00000392455 FUOMA2VDF0 154 aa14.15□□□□□ -0.14
CCDC50-201ENST00000392455 MRPS14O60783 128 aaKnown RBP14.15□□□□□ -0.14
CCDC50-201ENST00000392455 PIGRP01833 764 aa14.15□□□□□ -0.14
CCDC50-201ENST00000392455 CDKN2BP42772 138 aa14.15□□□□□ -0.14
CCDC50-201ENST00000392455 RASGEF1CQ8N431 466 aa14.15□□□□□ -0.14
CCDC50-201ENST00000392455 GDPD1Q8N9F7 314 aa14.15□□□□□ -0.14
CCDC50-201ENST00000392455 NAXEQ8NCW5 288 aa14.15□□□□□ -0.14
CCDC50-201ENST00000392455 MT-CYBP00156 380 aaPredicted RBP14.15□□□□□ -0.14
CCDC50-201ENST00000392455 HNRNPDQ14103 355 aaKnown RBP14.15□□□□□ -0.14
CCDC50-201ENST00000392455 MPPED2Q15777 294 aa14.15□□□□□ -0.14
CCDC50-201ENST00000392455 FAM214AQ32MH5 1076 aa14.15□□□□□ -0.14
CCDC50-201ENST00000392455 FAM69AQ5T7M9 428 aa14.15□□□□□ -0.14
CCDC50-201ENST00000392455 RNF32Q9H0A6 362 aa14.15□□□□□ -0.14
CCDC50-201ENST00000392455 SLC22A14Q9Y267 594 aa14.15□□□□□ -0.14
CCDC50-201ENST00000392455 SLC38A8A6NNN8 435 aa14.15□□□□□ -0.14
CCDC50-201ENST00000392455 FABP1P07148 127 aa14.15□□□□□ -0.14
CCDC50-201ENST00000392455 XRCC1P18887 633 aaPredicted RBP14.15□□□□□ -0.14
CCDC50-201ENST00000392455 SNTB2Q13425 540 aaKnown RBP14.15□□□□□ -0.14
CCDC50-201ENST00000392455 UBXN2BQ14CS0 331 aa14.15□□□□□ -0.14
CCDC50-201ENST00000392455 VARS2Q5ST30 1063 aaKnown RBP14.15□□□□□ -0.14
CCDC50-201ENST00000392455 OR1E3Q8WZA6 343 aa14.15□□□□□ -0.14
CCDC50-201ENST00000392455 ADAMTS10Q9H324 1103 aa14.15□□□□□ -0.14
CCDC50-201ENST00000392455 KLHL9Q9P2J3 617 aa14.15□□□□□ -0.14
CCDC50-201ENST00000392455 hCG_1807616A0A1W2PRN6 198 aa14.15□□□□□ -0.14
CCDC50-201ENST00000392455 EME2A4GXA9 379 aaPredicted RBP14.15□□□□□ -0.14
CCDC50-201ENST00000392455 APBB3O95704 486 aa14.15□□□□□ -0.14
CCDC50-201ENST00000392455 CD48P09326 243 aa14.15□□□□□ -0.14
CCDC50-201ENST00000392455 TLE1Q04724 770 aa14.15□□□□□ -0.14
CCDC50-201ENST00000392455 RNASE10Q5GAN6 216 aaKnown RBP14.15□□□□□ -0.14
CCDC50-201ENST00000392455 FSTL4Q6MZW2 842 aa14.15□□□□□ -0.14
CCDC50-201ENST00000392455 C15orf52Q6ZUT6 534 aaKnown RBP14.15□□□□□ -0.14
CCDC50-201ENST00000392455 SMPDL3AQ92484 453 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms