RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 DDX31Q9H8H2 851 aaKnown RBP15.29■□□□□ 0.04
PTPRK-208ENST00000392449 TEX10Q9NXF1 929 aaPredicted RBP15.29■□□□□ 0.04
PTPRK-208ENST00000392449 TSC22D4Q9Y3Q8 395 aa15.29■□□□□ 0.04
PTPRK-208ENST00000392449 NINQ8N4C6 2090 aa15.29■□□□□ 0.04
PTPRK-208ENST00000392449 A0A1B0GTL3 188 aa15.28■□□□□ 0.04
PTPRK-208ENST00000392449 IGHG3P01860 377 aa15.28■□□□□ 0.04
PTPRK-208ENST00000392449 ENDOUP21128 410 aaKnown RBP15.28■□□□□ 0.04
PTPRK-208ENST00000392449 SSTR2P30874 369 aa15.28■□□□□ 0.04
PTPRK-208ENST00000392449 CHRNB4P30926 498 aa15.28■□□□□ 0.04
PTPRK-208ENST00000392449 TLX1P31314 330 aaPredicted RBP15.28■□□□□ 0.04
PTPRK-208ENST00000392449 SSTR4P31391 388 aa15.28■□□□□ 0.04
PTPRK-208ENST00000392449 TLE4Q04727 773 aa15.28■□□□□ 0.04
PTPRK-208ENST00000392449 CKAP4Q07065 602 aaKnown RBP15.28■□□□□ 0.04
PTPRK-208ENST00000392449 TFF3Q07654 80 aa15.28■□□□□ 0.04
PTPRK-208ENST00000392449 RTL6Q6ICC9 239 aa15.28■□□□□ 0.04
PTPRK-208ENST00000392449 TMEM211Q6ICI0 200 aa15.28■□□□□ 0.04
PTPRK-208ENST00000392449 PAOXQ6QHF9 649 aa15.28■□□□□ 0.04
PTPRK-208ENST00000392449 RGS9BPQ6ZS82 235 aa15.28■□□□□ 0.04
PTPRK-208ENST00000392449 CCDC91Q7Z6B0 441 aa15.28■□□□□ 0.04
PTPRK-208ENST00000392449 NOA1Q8NC60 698 aaKnown RBP15.28■□□□□ 0.04
PTPRK-208ENST00000392449 FAM13CQ8NE31 585 aa15.28■□□□□ 0.04
PTPRK-208ENST00000392449 UHMK1Q8TAS1 419 aaKnown RBP15.28■□□□□ 0.04
PTPRK-208ENST00000392449 SLC22A8Q8TCC7 542 aa15.28■□□□□ 0.04
PTPRK-208ENST00000392449 RIT1Q92963 219 aa15.28■□□□□ 0.04
PTPRK-208ENST00000392449 SPACA9Q96E40 222 aaPredicted RBP15.28■□□□□ 0.04
PTPRK-208ENST00000392449 WWTR1Q9GZV5 400 aa15.28■□□□□ 0.04
PTPRK-208ENST00000392449 PROK2Q9HC23 129 aa15.28■□□□□ 0.04
PTPRK-208ENST00000392449 ZBTB26Q9HCK0 441 aa15.28■□□□□ 0.04
PTPRK-208ENST00000392449 LYARQ9NX58 379 aaKnown RBP15.28■□□□□ 0.04
PTPRK-208ENST00000392449 SPRR3Q9UBC9 169 aa15.28■□□□□ 0.04
PTPRK-208ENST00000392449 XPR1Q9UBH6 696 aa15.28■□□□□ 0.04
PTPRK-208ENST00000392449 DMGDHQ9UI17 866 aaKnown RBP15.28■□□□□ 0.04
PTPRK-208ENST00000392449 FAM215AQ9Y5M1 114 aa15.28■□□□□ 0.04
PTPRK-208ENST00000392449 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.28■□□□□ 0.04
PTPRK-208ENST00000392449 IQANK1A0A1B0GTG1 560 aa15.27■□□□□ 0.04
PTPRK-208ENST00000392449 LRRC3CA6NJW4 275 aa15.27■□□□□ 0.04
PTPRK-208ENST00000392449 DYRK3O43781 588 aa15.27■□□□□ 0.04
PTPRK-208ENST00000392449 UGDHO60701 494 aa15.27■□□□□ 0.04
PTPRK-208ENST00000392449 URI1O94763 535 aaPredicted RBP15.27■□□□□ 0.04
PTPRK-208ENST00000392449 TOXO94900 526 aa15.27■□□□□ 0.04
PTPRK-208ENST00000392449 CLDN9O95484 217 aa15.27■□□□□ 0.04
PTPRK-208ENST00000392449 CT62P0C5K7 136 aa15.27■□□□□ 0.04
PTPRK-208ENST00000392449 PHBP35232 272 aa15.27■□□□□ 0.04
PTPRK-208ENST00000392449 SLC37A1P57057 533 aa15.27■□□□□ 0.04
PTPRK-208ENST00000392449 PHEXP78562 749 aa15.27■□□□□ 0.04
PTPRK-208ENST00000392449 CUL3Q13618 768 aa15.27■□□□□ 0.04
PTPRK-208ENST00000392449 EBPQ15125 230 aaKnown RBP15.27■□□□□ 0.04
PTPRK-208ENST00000392449 SGO1Q5FBB7 561 aa15.27■□□□□ 0.04
PTPRK-208ENST00000392449 SLC22A10Q63ZE4 541 aa15.27■□□□□ 0.04
PTPRK-208ENST00000392449 RNF111Q6ZNA4 994 aa15.27■□□□□ 0.04
PTPRK-208ENST00000392449 NUDT13Q86X67 352 aa15.27■□□□□ 0.04
PTPRK-208ENST00000392449 LILRB4Q8NHJ6 448 aa15.27■□□□□ 0.04
PTPRK-208ENST00000392449 SLC44A1Q8WWI5 657 aa15.27■□□□□ 0.04
PTPRK-208ENST00000392449 REPS1Q96D71 796 aa15.27■□□□□ 0.04
PTPRK-208ENST00000392449 JSRP1Q96MG2 331 aaPredicted RBP15.27■□□□□ 0.04
PTPRK-208ENST00000392449 MRPL1Q9BYD6 325 aaKnown RBP15.27■□□□□ 0.04
PTPRK-208ENST00000392449 PCTPQ9UKL6 214 aa15.27■□□□□ 0.04
PTPRK-208ENST00000392449 CHCHD2Q9Y6H1 151 aaPredicted RBP15.27■□□□□ 0.04
PTPRK-208ENST00000392449 PPP6CO00743 305 aa15.27■□□□□ 0.03
PTPRK-208ENST00000392449 TSPAN8P19075 237 aa15.27■□□□□ 0.03
PTPRK-208ENST00000392449 ACVR2AP27037 513 aa15.27■□□□□ 0.03
PTPRK-208ENST00000392449 MAGEA12P43365 314 aa15.27■□□□□ 0.03
PTPRK-208ENST00000392449 CCNG1P51959 295 aa15.27■□□□□ 0.03
PTPRK-208ENST00000392449 KCNJ2P63252 427 aa15.27■□□□□ 0.03
PTPRK-208ENST00000392449 TRAF3Q13114 568 aa15.27■□□□□ 0.03
PTPRK-208ENST00000392449 SPRED3Q2MJR0 410 aa15.27■□□□□ 0.03
PTPRK-208ENST00000392449 BICRALQ6AI39 1079 aa15.27■□□□□ 0.03
PTPRK-208ENST00000392449 SLC29A4Q7RTT9 530 aa15.27■□□□□ 0.03
PTPRK-208ENST00000392449 MMP21Q8N119 569 aa15.27■□□□□ 0.03
PTPRK-208ENST00000392449 OR10Q1Q8NGQ4 319 aa15.27■□□□□ 0.03
PTPRK-208ENST00000392449 PAQR8Q8TEZ7 354 aa15.27■□□□□ 0.03
PTPRK-208ENST00000392449 CHTF18Q8WVB6 975 aa15.27■□□□□ 0.03
PTPRK-208ENST00000392449 ASB5Q8WWX0 329 aa15.27■□□□□ 0.03
PTPRK-208ENST00000392449 IFT81Q8WYA0 676 aa15.27■□□□□ 0.03
PTPRK-208ENST00000392449 ATP6V1E2Q96A05 226 aa15.27■□□□□ 0.03
PTPRK-208ENST00000392449 ART5Q96L15 291 aa15.27■□□□□ 0.03
PTPRK-208ENST00000392449 PAFAH2Q99487 392 aa15.27■□□□□ 0.03
PTPRK-208ENST00000392449 TREX2Q9BQ50 279 aaPredicted RBP15.27■□□□□ 0.03
PTPRK-208ENST00000392449 SLC6A15Q9H2J7 730 aa15.27■□□□□ 0.03
PTPRK-208ENST00000392449 LDAHQ9H6V9 325 aa15.27■□□□□ 0.03
PTPRK-208ENST00000392449 EXO5Q9H790 373 aa15.27■□□□□ 0.03
PTPRK-208ENST00000392449 ZNF703Q9H7S9 590 aaPredicted RBP15.27■□□□□ 0.03
PTPRK-208ENST00000392449 FARSBQ9NSD9 589 aaKnown RBP15.27■□□□□ 0.03
PTPRK-208ENST00000392449 TNPO3Q9Y5L0 923 aaKnown RBP15.27■□□□□ 0.03
PTPRK-208ENST00000392449 FREM3P0C091 2139 aa15.26■□□□□ 0.03
PTPRK-208ENST00000392449 F8P00451 2351 aa15.26■□□□□ 0.03
PTPRK-208ENST00000392449 A0A1B0GVC2 190 aa15.26■□□□□ 0.03
PTPRK-208ENST00000392449 POC1B-GALNT4F8VUJ3 575 aa15.26■□□□□ 0.03
PTPRK-208ENST00000392449 FOXE1O00358 373 aaPredicted RBP15.26■□□□□ 0.03
PTPRK-208ENST00000392449 KLK1P06870 262 aa15.26■□□□□ 0.03
PTPRK-208ENST00000392449 INHBAP08476 426 aa15.26■□□□□ 0.03
PTPRK-208ENST00000392449 FBXO45P0C2W1 286 aa15.26■□□□□ 0.03
PTPRK-208ENST00000392449 GLI4P10075 376 aa15.26■□□□□ 0.03
PTPRK-208ENST00000392449 PYGBP11216 843 aa15.26■□□□□ 0.03
PTPRK-208ENST00000392449 IGFBP2P18065 325 aa15.26■□□□□ 0.03
PTPRK-208ENST00000392449 ECHS1P30084 290 aa15.26■□□□□ 0.03
PTPRK-208ENST00000392449 MAN2A2P49641 1150 aa15.26■□□□□ 0.03
PTPRK-208ENST00000392449 SLC10A1Q14973 349 aa15.26■□□□□ 0.03
PTPRK-208ENST00000392449 HYAL4Q2M3T9 481 aa15.26■□□□□ 0.03
PTPRK-208ENST00000392449 FBXW8Q8N3Y1 598 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms