RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 NXPE2Q96DL1 559 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 ELMOD3Q96FG2 381 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 YIPF1Q9Y548 306 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 COL5A3P25940 1745 aaPredicted RBP13.6□□□□□ -0.23
RTF1-201ENST00000389629 PHIPQ8WWQ0 1821 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 NUP214P35658 2090 aaPredicted RBP13.6□□□□□ -0.23
RTF1-201ENST00000389629 E7EQ34 232 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 AKR7A2O43488 359 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 AOC2O75106 756 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 OAZ2O95190 189 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 HMGN1P05114 100 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 OSMP13725 252 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 ITGA3P26006 1051 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 VSX2P58304 361 aaPredicted RBP13.6□□□□□ -0.23
RTF1-201ENST00000389629 RBBP4Q09028 425 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 ZNF782Q6ZMW2 699 aaPredicted RBP13.6□□□□□ -0.23
RTF1-201ENST00000389629 MFSD4AQ8N468 514 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 OR8K5Q8NH50 307 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 LKAAEAR1Q8TD35 194 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 CLIP3Q96DZ5 547 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 ZNF419Q96HQ0 510 aaPredicted RBP13.6□□□□□ -0.23
RTF1-201ENST00000389629 HRASLS5Q96KN8 279 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 FERD3LQ96RJ6 166 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 SLIRPQ9GZT3 109 aaKnown RBP13.6□□□□□ -0.23
RTF1-201ENST00000389629 IMP3Q9NV31 184 aaKnown RBP13.6□□□□□ -0.23
RTF1-201ENST00000389629 SLC39A1Q9NY26 324 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 KLK4Q9Y5K2 254 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 C2orf78A6NCI8 922 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 GLOD5A6NK44 160 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 FAAHO00519 579 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 GJA1P17302 382 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 MAPK9P45984 424 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 SUOXP51687 545 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 CLCN7P51798 805 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 SP140Q13342 867 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 LASP1Q14847 261 aaKnown RBP13.6□□□□□ -0.23
RTF1-201ENST00000389629 XKR4Q5GH76 650 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 KDM4DQ6B0I6 523 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 TMED4Q7Z7H5 227 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 ZNF557Q8N988 423 aaPredicted RBP13.6□□□□□ -0.23
RTF1-201ENST00000389629 TRIM43Q96BQ3 446 aaPredicted RBP13.6□□□□□ -0.23
RTF1-201ENST00000389629 YIPF6Q96EC8 236 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 TAS2R10Q9NYW0 307 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 SLC25A37Q9NYZ2 338 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 Q9Y3F1 56 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 PI15O43692 258 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 PRKCAP17252 672 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 WNT4P56705 351 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 PIN1Q13526 163 aaPredicted RBP13.6□□□□□ -0.23
RTF1-201ENST00000389629 NKG7Q16617 165 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 MANEALQ5VSG8 457 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 MSANTD1Q6ZTZ1 278 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 COMMD2Q86X83 199 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 CXorf40AQ8TE69 158 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 TCF7L1Q9HCS4 588 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 ELOVL2Q9NXB9 296 aa13.6□□□□□ -0.23
RTF1-201ENST00000389629 F8A1P23610 371 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 HOXD9P28356 352 aaPredicted RBP13.59□□□□□ -0.23
RTF1-201ENST00000389629 LRRC32Q14392 662 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 LRRC37A5PQ49AS3 106 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 NXNL2Q5VZ03 156 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 HAGHLQ6PII5 290 aaPredicted RBP13.59□□□□□ -0.23
RTF1-201ENST00000389629 B3GLCTQ6Y288 498 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 LMAN2LQ9H0V9 348 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 TREM1Q9NP99 234 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 OSGIN1Q9UJX0 560 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 OR2AT4A6NND4 320 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 PAHP00439 452 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 ALPPP05187 535 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 IL3P08700 152 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 NAT1P18440 290 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 KELP23276 732 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 TMEM44Q2T9K0 475 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 CDKL4Q5MAI5 379 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 PLEKHS1Q5SXH7 462 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 GDPD4Q6W3E5 623 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 BCDIN3DQ7Z5W3 292 aaKnown RBP13.59□□□□□ -0.23
RTF1-201ENST00000389629 NIPSNAP1Q9BPW8 284 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 CDADC1Q9BWV3 514 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 OR51J1Q9H342 316 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 SLC35C2Q9NQQ7 365 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 FMO6PO60774 539 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 ZNF865P0CJ78 1059 aaPredicted RBP13.59□□□□□ -0.23
RTF1-201ENST00000389629 DDCP20711 480 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 TGM4P49221 684 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 GDI2P50395 445 aaKnown RBP13.59□□□□□ -0.23
RTF1-201ENST00000389629 COL9A2Q14055 689 aaPredicted RBP13.59□□□□□ -0.23
RTF1-201ENST00000389629 SF3A2Q15428 464 aaKnown RBP13.59□□□□□ -0.23
RTF1-201ENST00000389629 OAFQ86UD1 273 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 NPAS4Q8IUM7 802 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 APCDD1Q8J025 514 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 NATD1Q8N6N6 113 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 RIPOR3Q96MK2 946 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 RRAGCQ9HB90 399 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 CLEC2DQ9UHP7 191 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 TMPRSS11EQ9UL52 423 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 ZNF840PA6NDX5 716 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 FAM227AF5H4B4 570 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 TSPAN6O43657 245 aa13.59□□□□□ -0.23
RTF1-201ENST00000389629 NUDT14O95848 222 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms