RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 CNOT2Q9NZN8 540 aaKnown RBP12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 GASTP01350 101 aa12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 CSNK2A2P19784 350 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 RPS19P39019 145 aaKnown RBP12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 LMAN2Q12907 356 aa12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 SNTB2Q13425 540 aaKnown RBP12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 KCNC3Q14003 757 aa12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 CHPFQ8IZ52 775 aa12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 SIMC1Q8NDZ2 872 aa12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 OR9A1PQ8NGU1 263 aa12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 OR10G6Q8NH81 332 aa12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 C17orf62Q9BQA9 187 aa12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 RTP3Q9BQQ7 232 aa12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 CLEC2DQ9UHP7 191 aa12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 ZNF821O75541 412 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 ZNF10P21506 573 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 RNF144AP50876 292 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 CCR8P51685 355 aa12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 RGS1Q08116 209 aa12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 ZNHIT3Q15649 155 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 SLC5A12Q1EHB4 618 aa12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 COMMD7Q86VX2 200 aa12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 AMZ2Q86W34 360 aa12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 CCDC116Q8IYX3 515 aa12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 LMNTD1Q8N9Z9 388 aa12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 SRFBP1Q8NEF9 429 aaKnown RBP12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 OR2T35Q8NGX2 323 aa12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 GRHL3Q8TE85 626 aa12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 OR8D1Q8WZ84 308 aa12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 MLXQ9UH92 298 aa12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 BTNL2Q9UIR0 455 aa12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 TEX13CA0A0J9YWL9 993 aa12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 MMP20O60882 483 aa12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 MPC1LP0DKB6 136 aa12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 VIPR1P32241 457 aa12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 MAGEA2P43356 314 aa12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 TRAM2Q15035 370 aa12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 ZMYND11Q15326 602 aa12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 SFRP4Q6FHJ7 346 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 TRIM46Q7Z4K8 759 aa12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 COMMD2Q86X83 199 aa12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 PLCZ1Q86YW0 608 aa12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 C16orf78Q8WTQ4 265 aa12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 TFGQ92734 400 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 CREB3L1Q96BA8 519 aa12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 OR4K3Q96R72 315 aa12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 MCHR1Q99705 422 aa12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 SLIRPQ9GZT3 109 aaKnown RBP12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 TCF7L1Q9HCS4 588 aa12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 HMX1Q9NP08 348 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 PLSCR3Q9NRY6 295 aa12.53□□□□□ -0.4
TRAPPC9-201ENST00000389328 NUPL2O15504 423 aaKnown RBP12.52□□□□□ -0.4
TRAPPC9-201ENST00000389328 JUNDP17535 347 aa12.52□□□□□ -0.4
TRAPPC9-201ENST00000389328 SSTR2P30874 369 aa12.52□□□□□ -0.4
TRAPPC9-201ENST00000389328 PSMA6P60900 246 aaKnown RBP12.52□□□□□ -0.4
TRAPPC9-201ENST00000389328 C4orf46Q504U0 113 aa12.52□□□□□ -0.4
TRAPPC9-201ENST00000389328 PGBD2Q6P3X8 592 aa12.52□□□□□ -0.4
TRAPPC9-201ENST00000389328 PJA1Q8NG27 643 aa12.52□□□□□ -0.4
TRAPPC9-201ENST00000389328 OR5P2Q8WZ92 322 aa12.52□□□□□ -0.4
TRAPPC9-201ENST00000389328 RSPH9Q9H1X1 276 aaPredicted RBP12.52□□□□□ -0.4
TRAPPC9-201ENST00000389328 GON4LQ3T8J9 2241 aa12.52□□□□□ -0.4
TRAPPC9-201ENST00000389328 TNFRSF10AO00220 468 aa12.52□□□□□ -0.4
TRAPPC9-201ENST00000389328 ARHGEF15O94989 841 aa12.52□□□□□ -0.4
TRAPPC9-201ENST00000389328 IFNA16P05015 189 aa12.52□□□□□ -0.4
TRAPPC9-201ENST00000389328 MPIP34949 423 aa12.52□□□□□ -0.4
TRAPPC9-201ENST00000389328 SLC19A1P41440 591 aa12.52□□□□□ -0.4
TRAPPC9-201ENST00000389328 WASP42768 502 aa12.52□□□□□ -0.4
TRAPPC9-201ENST00000389328 GPR4P46093 362 aa12.52□□□□□ -0.4
TRAPPC9-201ENST00000389328 FNTBP49356 437 aa12.52□□□□□ -0.4
TRAPPC9-201ENST00000389328 GBX2P52951 348 aaPredicted RBP12.52□□□□□ -0.4
TRAPPC9-201ENST00000389328 PUDPQ08623 228 aa12.52□□□□□ -0.4
TRAPPC9-201ENST00000389328 SLAMF1Q13291 335 aa12.52□□□□□ -0.4
TRAPPC9-201ENST00000389328 FAM205BPQ63HN1 556 aa12.52□□□□□ -0.4
TRAPPC9-201ENST00000389328 SLC30A6Q6NXT4 461 aa12.52□□□□□ -0.4
TRAPPC9-201ENST00000389328 MTFR2Q6P444 385 aa12.52□□□□□ -0.4
TRAPPC9-201ENST00000389328 BRAT1Q6PJG6 821 aa12.52□□□□□ -0.4
TRAPPC9-201ENST00000389328 PDZD3Q86UT5 571 aa12.52□□□□□ -0.4
TRAPPC9-201ENST00000389328 FTMTQ8N4E7 242 aa12.52□□□□□ -0.4
TRAPPC9-201ENST00000389328 RELTQ969Z4 430 aa12.52□□□□□ -0.4
TRAPPC9-201ENST00000389328 RDH14Q9HBH5 336 aa12.52□□□□□ -0.4
TRAPPC9-201ENST00000389328 STOX2Q9P2F5 926 aaPredicted RBP12.52□□□□□ -0.4
TRAPPC9-201ENST00000389328 ALG5Q9Y673 324 aa12.52□□□□□ -0.4
TRAPPC9-201ENST00000389328 SHROOM3Q8TF72 1996 aa12.52□□□□□ -0.41
TRAPPC9-201ENST00000389328 EPHX1P07099 455 aa12.52□□□□□ -0.41
TRAPPC9-201ENST00000389328 H2AFB2P0C5Z0 115 aa12.52□□□□□ -0.41
TRAPPC9-201ENST00000389328 PYCR1P32322 319 aa12.52□□□□□ -0.41
TRAPPC9-201ENST00000389328 NRIP1P48552 1158 aa12.52□□□□□ -0.41
TRAPPC9-201ENST00000389328 MANEALQ5VSG8 457 aa12.52□□□□□ -0.41
TRAPPC9-201ENST00000389328 DNAJA4Q8WW22 397 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC9-201ENST00000389328 SLC7A6Q92536 515 aa12.52□□□□□ -0.41
TRAPPC9-201ENST00000389328 OSTF1Q92882 214 aa12.52□□□□□ -0.41
TRAPPC9-201ENST00000389328 SCLYQ96I15 445 aa12.52□□□□□ -0.41
TRAPPC9-201ENST00000389328 CDADC1Q9BWV3 514 aa12.52□□□□□ -0.41
TRAPPC9-201ENST00000389328 SORBS1Q9BX66 1292 aaKnown RBP12.52□□□□□ -0.41
TRAPPC9-201ENST00000389328 CNIH4Q9P003 139 aa12.52□□□□□ -0.41
TRAPPC9-201ENST00000389328 ZNF225Q9UK10 706 aa12.52□□□□□ -0.41
TRAPPC9-201ENST00000389328 PPT2Q9UMR5 302 aa12.52□□□□□ -0.41
TRAPPC9-201ENST00000389328 MAU2Q9Y6X3 613 aa12.52□□□□□ -0.41
TRAPPC9-201ENST00000389328 MICAL3Q7RTP6 2002 aa12.52□□□□□ -0.41
TRAPPC9-201ENST00000389328 LRRN3E7EW58 273 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms