RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 SIX5Q8N196 739 aa9.91□□□□□ -0.82
POLR2J3-201ENST00000379340 DEPDC4Q8N2C3 294 aa9.91□□□□□ -0.82
POLR2J3-201ENST00000379340 PARP8Q8N3A8 854 aa9.91□□□□□ -0.82
POLR2J3-201ENST00000379340 ACOT4Q8N9L9 421 aa9.91□□□□□ -0.82
POLR2J3-201ENST00000379340 BPIFB6Q8NFQ5 453 aa9.91□□□□□ -0.82
POLR2J3-201ENST00000379340 RPLP0P6Q8NHW5 317 aa9.91□□□□□ -0.82
POLR2J3-201ENST00000379340 BBS10Q8TAM1 723 aa9.91□□□□□ -0.82
POLR2J3-201ENST00000379340 SLC38A5Q8WUX1 472 aa9.91□□□□□ -0.82
POLR2J3-201ENST00000379340 PROX1Q92786 737 aa9.91□□□□□ -0.82
POLR2J3-201ENST00000379340 MUL1Q969V5 352 aa9.91□□□□□ -0.82
POLR2J3-201ENST00000379340 BMFQ96LC9 184 aa9.91□□□□□ -0.82
POLR2J3-201ENST00000379340 ABCG4Q9H172 646 aa9.91□□□□□ -0.82
POLR2J3-201ENST00000379340 SRMSQ9H3Y6 488 aa9.91□□□□□ -0.82
POLR2J3-201ENST00000379340 GLIPR2Q9H4G4 154 aa9.91□□□□□ -0.82
POLR2J3-201ENST00000379340 DUSP21Q9H596 190 aa9.91□□□□□ -0.82
POLR2J3-201ENST00000379340 DNAAF2Q9NVR5 837 aaKnown RBP9.91□□□□□ -0.82
POLR2J3-201ENST00000379340 SPHK1Q9NYA1 384 aa9.91□□□□□ -0.82
POLR2J3-201ENST00000379340 KCND3Q9UK17 655 aa9.91□□□□□ -0.82
POLR2J3-201ENST00000379340 PRAMEF33A0A0G2JMD5 474 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 TCRBV21S2A2A0A5A6 115 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 KRBA1A5PL33 1030 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 A6NCN8 305 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 URADA6NGE7 173 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 C10orf142B7Z368 130 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 H3BMQ9 156 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 TNFSF14O43557 240 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 PRAMEF10O60809 474 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 MFN2O95140 757 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 GADD45GO95257 159 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 OXSR1O95747 527 aaPredicted RBP9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 HTR1AP08908 422 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 CYP4B1P13584 511 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 CSNK2A2P19784 350 aaPredicted RBP9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 ACSL1P33121 698 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 GGT2P36268 569 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 RABIFP47224 123 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 KCNJ5P48544 419 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 CCR5P51681 352 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 NCBP2P52298 156 aaKnown RBP eCLIP9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 SMIM11AP58511 58 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 SRP54P61011 504 aaKnown RBP9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 RPP38P78345 283 aaKnown RBP9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 SLC35A2P78381 396 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 RELAQ04206 551 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 TP53BP2Q13625 1128 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 CEBPEQ15744 281 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 EXOC3L2Q2M3D2 409 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 GPR107Q5VW38 600 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 MLIPQ5VWP3 458 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 GTF2IRD2BQ6EKJ0 949 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 SLC48A1Q6P1K1 146 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 TMEM92Q6UXU6 159 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 B3GNT8Q7Z7M8 397 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 ASPGQ86U10 573 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 GTF2IRD2Q86UP8 949 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 SAMD14Q8IZD0 417 aaPredicted RBP9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 OR4E2Q8NGC2 313 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 OR8K5Q8NH50 307 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 CNIH3Q8TBE1 160 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 MIPOL1Q8TD10 442 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 APOBEC4Q8WW27 367 aaKnown RBP9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 ZNF354BQ96LW1 612 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 COG8Q96MW5 612 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 FEVQ99581 238 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 BTBD2Q9BX70 525 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 KLHL31Q9H511 634 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 GPN2Q9H9Y4 310 aaPredicted RBP9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 BCL2L10Q9HD36 194 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 POLMQ9NP87 494 aaPredicted RBP9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 LTB4R2Q9NPC1 389 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 ZCCHC3Q9NUD5 404 aaKnown RBP9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 PLCXD1Q9NUJ7 323 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 ZNF624Q9P2J8 865 aaPredicted RBP9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 EBF1Q9UH73 591 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 RALYQ9UKM9 306 aaKnown RBP9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 PSME2Q9UL46 239 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 CDC14AQ9UNH5 594 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 ENTPD2Q9Y5L3 495 aa9.9□□□□□ -0.82
POLR2J3-201ENST00000379340 ATG2BQ96BY7 2078 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 OR2A25A4D2G3 310 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 PRAMEF25A6NGN4 478 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 OR5K4A6NMS3 321 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 ZNF99A8MXY4 864 aaPredicted RBP9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 PRAMEF26H0Y7S4 382 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 SLC28A2O43868 658 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 FAM20BO75063 409 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 RASGRP1O95267 797 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 SEMA4FO95754 770 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 AIFM1O95831 613 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 TNFP01375 233 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 IGLV3-19P01714 112 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 FHP07954 510 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 SLC35G6P0C7Q6 338 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 GABRG2P18507 467 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 CCNA2P20248 432 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 ZNF10P21506 573 aaPredicted RBP9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 MATN1P21941 496 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 PCMT1P22061 227 aa9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 AK4P27144 223 aaPredicted RBP9.89□□□□□ -0.83
POLR2J3-201ENST00000379340 SLC19A1P41440 591 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms