RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 XCR1P46094 333 aa23.08■■□□□ 1.28
ECHDC3-201ENST00000379215 MAPK10P53779 464 aa23.08■■□□□ 1.28
ECHDC3-201ENST00000379215 POLE2P56282 527 aa23.08■■□□□ 1.28
ECHDC3-201ENST00000379215 RHDQ02161 417 aa23.08■■□□□ 1.28
ECHDC3-201ENST00000379215 RBBP4Q09028 425 aa23.08■■□□□ 1.28
ECHDC3-201ENST00000379215 DDX59Q5T1V6 619 aaKnown RBP eCLIP23.08■■□□□ 1.28
ECHDC3-201ENST00000379215 GLYATQ6IB77 296 aa23.08■■□□□ 1.28
ECHDC3-201ENST00000379215 OR52E4Q8NGH9 312 aa23.08■■□□□ 1.28
ECHDC3-201ENST00000379215 NSMCE2Q96MF7 247 aa23.08■■□□□ 1.28
ECHDC3-201ENST00000379215 PARD6AQ9NPB6 346 aa23.08■■□□□ 1.28
ECHDC3-201ENST00000379215 PRTFDC1Q9NRG1 225 aa23.08■■□□□ 1.28
ECHDC3-201ENST00000379215 ZCCHC3Q9NUD5 404 aaKnown RBP23.08■■□□□ 1.28
ECHDC3-201ENST00000379215 DHCR7Q9UBM7 475 aaKnown RBP23.08■■□□□ 1.28
ECHDC3-201ENST00000379215 MMACHCQ9Y4U1 282 aa23.08■■□□□ 1.28
ECHDC3-201ENST00000379215 SYNDIG1LA6NDD5 238 aa23.07■■□□□ 1.28
ECHDC3-201ENST00000379215 EFCAB7A8K855 629 aa23.07■■□□□ 1.28
ECHDC3-201ENST00000379215 FAM227AF5H4B4 570 aa23.07■■□□□ 1.28
ECHDC3-201ENST00000379215 PLOD2O00469 737 aa23.07■■□□□ 1.28
ECHDC3-201ENST00000379215 EMC8O43402 210 aa23.07■■□□□ 1.28
ECHDC3-201ENST00000379215 SCRG1O75711 98 aa23.07■■□□□ 1.28
ECHDC3-201ENST00000379215 SLC35E2P0CK97 266 aa23.07■■□□□ 1.28
ECHDC3-201ENST00000379215 MAT1AQ00266 395 aaKnown RBP23.07■■□□□ 1.28
ECHDC3-201ENST00000379215 SLC13A2Q13183 592 aa23.07■■□□□ 1.28
ECHDC3-201ENST00000379215 VEZF1Q14119 521 aa23.07■■□□□ 1.28
ECHDC3-201ENST00000379215 VMACQ2NL98 169 aa23.07■■□□□ 1.28
ECHDC3-201ENST00000379215 GCNT6Q5T4J0 391 aa23.07■■□□□ 1.28
ECHDC3-201ENST00000379215 C6orf120Q7Z4R8 191 aa23.07■■□□□ 1.28
ECHDC3-201ENST00000379215 RNF130Q86XS8 419 aa23.07■■□□□ 1.28
ECHDC3-201ENST00000379215 SLC30A8Q8IWU4 369 aa23.07■■□□□ 1.28
ECHDC3-201ENST00000379215 DTWD1Q8N5C7 304 aa23.07■■□□□ 1.28
ECHDC3-201ENST00000379215 METTL27Q8N6F8 245 aaPredicted RBP23.07■■□□□ 1.28
ECHDC3-201ENST00000379215 TMEM52Q8NDY8 209 aa23.07■■□□□ 1.28
ECHDC3-201ENST00000379215 OR9A2Q8NGT5 310 aa23.07■■□□□ 1.28
ECHDC3-201ENST00000379215 COL26A1Q96A83 441 aa23.07■■□□□ 1.28
ECHDC3-201ENST00000379215 PELOQ9BRX2 385 aaKnown RBP23.07■■□□□ 1.28
ECHDC3-201ENST00000379215 STRADBQ9C0K7 418 aa23.07■■□□□ 1.28
ECHDC3-201ENST00000379215 CHST8Q9H2A9 424 aa23.07■■□□□ 1.28
ECHDC3-201ENST00000379215 TMEM38AQ9H6F2 299 aa23.07■■□□□ 1.28
ECHDC3-201ENST00000379215 PTGFRNQ9P2B2 879 aa23.07■■□□□ 1.28
ECHDC3-201ENST00000379215 VPS13AQ96RL7 3174 aa23.07■■□□□ 1.28
ECHDC3-201ENST00000379215 SCN3AQ9NY46 2000 aa23.07■■□□□ 1.28
ECHDC3-201ENST00000379215 TCRBV3S1A0A5B6 114 aa23.06■■□□□ 1.28
ECHDC3-201ENST00000379215 LDB3O75112 727 aa23.06■■□□□ 1.28
ECHDC3-201ENST00000379215 KCNK5O95279 499 aa23.06■■□□□ 1.28
ECHDC3-201ENST00000379215 BMP2P12643 396 aa23.06■■□□□ 1.28
ECHDC3-201ENST00000379215 MVDP53602 400 aa23.06■■□□□ 1.28
ECHDC3-201ENST00000379215 STX4Q12846 297 aa23.06■■□□□ 1.28
ECHDC3-201ENST00000379215 SERTAD2Q14140 314 aa23.06■■□□□ 1.28
ECHDC3-201ENST00000379215 SNCBQ16143 134 aa23.06■■□□□ 1.28
ECHDC3-201ENST00000379215 ZNF750Q32MQ0 723 aa23.06■■□□□ 1.28
ECHDC3-201ENST00000379215 LARP7Q4G0J3 582 aaKnown RBP eCLIP23.06■■□□□ 1.28
ECHDC3-201ENST00000379215 ARHGAP40Q5TG30 622 aa23.06■■□□□ 1.28
ECHDC3-201ENST00000379215 CYP2R1Q6VVX0 501 aa23.06■■□□□ 1.28
ECHDC3-201ENST00000379215 B3GNT8Q7Z7M8 397 aa23.06■■□□□ 1.28
ECHDC3-201ENST00000379215 CLEC4FQ8N1N0 589 aa23.06■■□□□ 1.28
ECHDC3-201ENST00000379215 ENDOVQ8N8Q3 282 aaKnown RBP23.06■■□□□ 1.28
ECHDC3-201ENST00000379215 C11orf65Q8NCR3 313 aa23.06■■□□□ 1.28
ECHDC3-201ENST00000379215 ANKRD9Q96BM1 317 aaPredicted RBP23.06■■□□□ 1.28
ECHDC3-201ENST00000379215 ELP4Q96EB1 424 aa23.06■■□□□ 1.28
ECHDC3-201ENST00000379215 CMKLR1Q99788 373 aa23.06■■□□□ 1.28
ECHDC3-201ENST00000379215 S100A14Q9HCY8 104 aa23.06■■□□□ 1.28
ECHDC3-201ENST00000379215 FAF1Q9UNN5 650 aaPredicted RBP23.06■■□□□ 1.28
ECHDC3-201ENST00000379215 MAU2Q9Y6X3 613 aa23.06■■□□□ 1.28
ECHDC3-201ENST00000379215 WDFY4Q6ZS81 3184 aa23.05■■□□□ 1.28
ECHDC3-201ENST00000379215 CXCR6O00574 342 aa23.05■■□□□ 1.28
ECHDC3-201ENST00000379215 KRT36O76013 467 aa23.05■■□□□ 1.28
ECHDC3-201ENST00000379215 ATP6V1B2P21281 511 aa23.05■■□□□ 1.28
ECHDC3-201ENST00000379215 PRIM2P49643 509 aa23.05■■□□□ 1.28
ECHDC3-201ENST00000379215 IGLV3-21P80748 117 aaPredicted RBP23.05■■□□□ 1.28
ECHDC3-201ENST00000379215 DUSP2Q05923 314 aa23.05■■□□□ 1.28
ECHDC3-201ENST00000379215 TP53BP2Q13625 1128 aa23.05■■□□□ 1.28
ECHDC3-201ENST00000379215 C16orf72Q14CZ0 275 aa23.05■■□□□ 1.28
ECHDC3-201ENST00000379215 TMEM107Q6UX40 140 aa23.05■■□□□ 1.28
ECHDC3-201ENST00000379215 OR4N5Q8IXE1 308 aa23.05■■□□□ 1.28
ECHDC3-201ENST00000379215 ZZZ3Q8IYH5 903 aa23.05■■□□□ 1.28
ECHDC3-201ENST00000379215 ZNF675Q8TD23 568 aa23.05■■□□□ 1.28
ECHDC3-201ENST00000379215 NCLNQ969V3 563 aa23.05■■□□□ 1.28
ECHDC3-201ENST00000379215 SLC35G5Q96KT7 338 aa23.05■■□□□ 1.28
ECHDC3-201ENST00000379215 MKKSQ9NPJ1 570 aaPredicted RBP23.05■■□□□ 1.28
ECHDC3-201ENST00000379215 NTMQ9P121 344 aa23.05■■□□□ 1.28
ECHDC3-201ENST00000379215 TMEM184BQ9Y519 407 aaPredicted RBP23.05■■□□□ 1.28
ECHDC3-201ENST00000379215 B4E171 279 aa23.04■■□□□ 1.28
ECHDC3-201ENST00000379215 POLR1CO15160 346 aaPredicted RBP23.04■■□□□ 1.28
ECHDC3-201ENST00000379215 OR10H2O60403 315 aa23.04■■□□□ 1.28
ECHDC3-201ENST00000379215 TNFRSF21O75509 655 aa23.04■■□□□ 1.28
ECHDC3-201ENST00000379215 GPIP06744 558 aa23.04■■□□□ 1.28
ECHDC3-201ENST00000379215 UMPSP11172 480 aa23.04■■□□□ 1.28
ECHDC3-201ENST00000379215 PCGF2P35227 344 aa23.04■■□□□ 1.28
ECHDC3-201ENST00000379215 TSPAN7P41732 249 aa23.04■■□□□ 1.28
ECHDC3-201ENST00000379215 OR1D4P47884 311 aa23.04■■□□□ 1.28
ECHDC3-201ENST00000379215 PDX1P52945 283 aa23.04■■□□□ 1.28
ECHDC3-201ENST00000379215 RCN1Q15293 331 aa23.04■■□□□ 1.28
ECHDC3-201ENST00000379215 IRAK1BP1Q5VVH5 260 aa23.04■■□□□ 1.28
ECHDC3-201ENST00000379215 SZRD1Q7Z422 152 aa23.04■■□□□ 1.28
ECHDC3-201ENST00000379215 SPPL2CQ8IUH8 684 aa23.04■■□□□ 1.28
ECHDC3-201ENST00000379215 ST13P4Q8IZP2 240 aaPredicted RBP23.04■■□□□ 1.28
ECHDC3-201ENST00000379215 C10orf111Q8N326 155 aa23.04■■□□□ 1.28
ECHDC3-201ENST00000379215 FIG4Q92562 907 aa23.04■■□□□ 1.28
ECHDC3-201ENST00000379215 DUS3LQ96G46 650 aaKnown RBP23.04■■□□□ 1.28
ECHDC3-201ENST00000379215 YIPF2Q9BWQ6 316 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms