RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 GALNT12Q8IXK2 581 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 SLC7A5P1Q8MH63 180 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 PELI3Q8N2H9 469 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 ELOA3Q8NG57 546 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 TP53INP1Q96A56 240 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 ARMC1Q9NVT9 282 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 USP22Q9UPT9 525 aa13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 MRPS7Q9Y2R9 242 aaKnown RBP13.49□□□□□ -0.25
SHROOM1-203ENST00000378679 H0Y8X5 98 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 GFYI3L273 518 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 TLR4O00206 839 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 XKRYO14609 159 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 KLK3P07288 261 aaPredicted RBP13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 AHCYP23526 432 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 ELK4P28324 431 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 RNF144AP50876 292 aaPredicted RBP13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 ADPRHP54922 357 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 YPEL5P62699 121 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 POU6F2P78424 691 aaPredicted RBP13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 FCHO2Q0JRZ9 810 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 HYAL1Q12794 435 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 SELPLGQ14242 412 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 RBM48Q5RL73 367 aaKnown RBP13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 USP30Q70CQ3 517 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 SLC29A4Q7RTT9 530 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 OR52E4Q8NGH9 312 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 BBS10Q8TAM1 723 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 SPATA9Q9BWV2 254 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 OSBPL10Q9BXB5 764 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 SLITRK2Q9H156 845 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 TAAR2Q9P1P5 351 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 C9J4A7 227 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 RNASET2O00584 256 aaKnown RBP13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 PIM1P11309 404 aaPredicted RBP13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 HIST1H1TP22492 207 aaPredicted RBP13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 OPRD1P41143 372 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 EIF4EBP2Q13542 120 aaPredicted RBP13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 CYHR1Q6ZMK1 362 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 TMPRSS11AQ6ZMR5 421 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 CACTIN-AS1Q8N1I8 211 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 NUDT8Q8WV74 236 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 EID2BQ96D98 161 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 SERHL2Q9H4I8 314 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 MYNNQ9NPC7 610 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 SERHLQ9NQF3 203 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 IKZF2Q9UKS7 526 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 A0A1B0GTL3 188 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 TLX2O43763 284 aaPredicted RBP13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 AIREO43918 545 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 PCDHGA12O60330 932 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 ZNF888P0CJ79 500 aaPredicted RBP13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 GSTM3P21266 225 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 CCKBRP32239 447 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 NRG3P56975 720 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 HBA1P69905 142 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 KRR1Q13601 381 aaKnown RBP13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 TAF13Q15543 124 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 ZBED5Q49AG3 693 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 FLYWCH1Q4VC44 716 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 COLEC12Q5KU26 742 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 CES4AQ5XG92 561 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 FIGNL1Q6PIW4 674 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 GHDCQ8N2G8 530 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 FRS2Q8WU20 508 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 PDXPQ96GD0 296 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 COQ10AQ96MF6 247 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 RDH12Q96NR8 316 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 FEVQ99581 238 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 HDHD2Q9H0R4 259 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 B4GAT1O43505 415 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 XPNPEP2O43895 674 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 GNAO1P09471 354 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 MLLT1Q03111 559 aaPredicted RBP13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 DPTQ07507 201 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 TMEM196Q5HYL7 178 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 TRIQKQ629K1 86 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 METRNLQ641Q3 311 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 SHQ1Q6PI26 577 aaKnown RBP13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 PLXDC1Q8IUK5 500 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 OR1E3Q8WZA6 343 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 MAPKAP1Q9BPZ7 522 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 TSSK6Q9BXA6 273 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 POLR2J2Q9GZM3 115 aaKnown RBP13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 STARD5Q9NSY2 213 aa13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 RPL36Q9Y3U8 105 aaKnown RBP13.48□□□□□ -0.25
SHROOM1-203ENST00000378679 ANTXRLA6NF34 631 aa13.47□□□□□ -0.25
SHROOM1-203ENST00000378679 SCDO00767 359 aa13.47□□□□□ -0.25
SHROOM1-203ENST00000378679 HMGN1P05114 100 aa13.47□□□□□ -0.25
SHROOM1-203ENST00000378679 ATP5A1P25705 553 aaKnown RBP13.47□□□□□ -0.25
SHROOM1-203ENST00000378679 GRM7Q14831 915 aa13.47□□□□□ -0.25
SHROOM1-203ENST00000378679 TRAM2Q15035 370 aa13.47□□□□□ -0.25
SHROOM1-203ENST00000378679 LAPTM4BQ86VI4 370 aa13.47□□□□□ -0.25
SHROOM1-203ENST00000378679 JAZF1Q86VZ6 243 aa13.47□□□□□ -0.25
SHROOM1-203ENST00000378679 SCAIQ8N9R8 606 aa13.47□□□□□ -0.25
SHROOM1-203ENST00000378679 ZNF527Q8NB42 609 aa13.47□□□□□ -0.25
SHROOM1-203ENST00000378679 OR5M3Q8NGP4 307 aa13.47□□□□□ -0.25
SHROOM1-203ENST00000378679 PIP5K1AQ99755 562 aa13.47□□□□□ -0.25
SHROOM1-203ENST00000378679 ERVK-11Q9UQG0 969 aa13.47□□□□□ -0.25
SHROOM1-203ENST00000378679 C8BP07358 591 aa13.47□□□□□ -0.25
SHROOM1-203ENST00000378679 MLF2Q15773 248 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms