RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 EFEMP1Q12805 493 aa11.27□□□□□ -0.6
NPHP4-202ENST00000378161 PTGR1Q14914 329 aa11.27□□□□□ -0.6
NPHP4-202ENST00000378161 FAM187BQ17R55 369 aa11.27□□□□□ -0.6
NPHP4-202ENST00000378161 PABPC1L2AQ5JQF8 200 aa11.27□□□□□ -0.6
NPHP4-202ENST00000378161 ZNF383Q8NA42 475 aa11.27□□□□□ -0.6
NPHP4-202ENST00000378161 FBXO32Q969P5 355 aa11.27□□□□□ -0.6
NPHP4-202ENST00000378161 SLC22A18Q96BI1 424 aa11.27□□□□□ -0.6
NPHP4-202ENST00000378161 GBA2Q9HCG7 927 aaPredicted RBP11.27□□□□□ -0.6
NPHP4-202ENST00000378161 CCR7P32248 378 aa11.27□□□□□ -0.61
NPHP4-202ENST00000378161 MAGEA6P43360 314 aa11.27□□□□□ -0.61
NPHP4-202ENST00000378161 ZNF648Q5T619 568 aaPredicted RBP11.27□□□□□ -0.61
NPHP4-202ENST00000378161 C1orf189Q5VU69 101 aa11.27□□□□□ -0.61
NPHP4-202ENST00000378161 SMYD5Q6GMV2 418 aa11.27□□□□□ -0.61
NPHP4-202ENST00000378161 C15orf39Q6ZRI6 1047 aa11.27□□□□□ -0.61
NPHP4-202ENST00000378161 RTL10Q7L3V2 364 aa11.27□□□□□ -0.61
NPHP4-202ENST00000378161 UBAC2Q8NBM4 344 aa11.27□□□□□ -0.61
NPHP4-202ENST00000378161 EEF1AKMT1Q8WVE0 214 aa11.27□□□□□ -0.61
NPHP4-202ENST00000378161 SEPT5Q99719 369 aaPredicted RBP11.27□□□□□ -0.61
NPHP4-202ENST00000378161 C19orf43Q9BQ61 176 aa11.27□□□□□ -0.61
NPHP4-202ENST00000378161 ALOXE3Q9BYJ1 711 aa11.27□□□□□ -0.61
NPHP4-202ENST00000378161 SMOC2Q9H3U7 446 aa11.27□□□□□ -0.61
NPHP4-202ENST00000378161 ZSCAN32Q9NX65 697 aa11.27□□□□□ -0.61
NPHP4-202ENST00000378161 CRLS1Q9UJA2 301 aa11.27□□□□□ -0.61
NPHP4-202ENST00000378161 POMT2Q9UKY4 750 aa11.27□□□□□ -0.61
NPHP4-202ENST00000378161 ERVW-1Q9UQF0 538 aa11.27□□□□□ -0.61
NPHP4-202ENST00000378161 DYRK1BQ9Y463 629 aa11.27□□□□□ -0.61
NPHP4-202ENST00000378161 CASTOR2A6NHX0 329 aa11.27□□□□□ -0.61
NPHP4-202ENST00000378161 FAM220BPB1ANY3 271 aa11.27□□□□□ -0.61
NPHP4-202ENST00000378161 UBFD1O14562 309 aaKnown RBP11.27□□□□□ -0.61
NPHP4-202ENST00000378161 GOT2P00505 430 aaKnown RBP11.27□□□□□ -0.61
NPHP4-202ENST00000378161 SOWAHCQ53LP3 525 aaPredicted RBP11.27□□□□□ -0.61
NPHP4-202ENST00000378161 FAM74A1Q5RGS3 127 aa11.27□□□□□ -0.61
NPHP4-202ENST00000378161 MANEALQ5VSG8 457 aa11.27□□□□□ -0.61
NPHP4-202ENST00000378161 ADAM5Q6NVV9 412 aa11.27□□□□□ -0.61
NPHP4-202ENST00000378161 MCATQ8IVS2 390 aaKnown RBP11.27□□□□□ -0.61
NPHP4-202ENST00000378161 GTPBP8Q8N3Z3 284 aaPredicted RBP11.27□□□□□ -0.61
NPHP4-202ENST00000378161 OR2L8Q8NGY9 312 aa11.27□□□□□ -0.61
NPHP4-202ENST00000378161 OR2T4Q8NH00 348 aa11.27□□□□□ -0.61
NPHP4-202ENST00000378161 OR14A16Q8NHC5 309 aa11.27□□□□□ -0.61
NPHP4-202ENST00000378161 DDOQ99489 341 aa11.27□□□□□ -0.61
NPHP4-202ENST00000378161 RNF167Q9H6Y7 350 aa11.27□□□□□ -0.61
NPHP4-202ENST00000378161 GPR83Q9NYM4 423 aa11.27□□□□□ -0.61
NPHP4-202ENST00000378161 ZNF214Q9UL59 606 aaPredicted RBP11.27□□□□□ -0.61
NPHP4-202ENST00000378161 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.26□□□□□ -0.61
NPHP4-202ENST00000378161 RGS14O43566 566 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 ITGA10O75578 1167 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 OR1G1P47890 313 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 HCCSP53701 268 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 CTBP2P56545 445 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 NDUFA6P56556 154 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 MRPS10P82664 201 aaKnown RBP11.26□□□□□ -0.61
NPHP4-202ENST00000378161 ZNF177Q13360 481 aaPredicted RBP11.26□□□□□ -0.61
NPHP4-202ENST00000378161 KIAA0141Q14154 515 aaPredicted RBP11.26□□□□□ -0.61
NPHP4-202ENST00000378161 MFSD14CQ5VZR4 134 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 C22orf42Q6IC83 251 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 ZNF529Q6P280 563 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 FAM111BQ6SJ93 734 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 LBX2Q6XYB7 198 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 NLRP8Q86W28 1048 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 POC1BQ8TC44 478 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 MOCOSQ96EN8 888 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 SCMH1Q96GD3 660 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 CXorf58Q96LI9 332 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 ARHGAP39Q9C0H5 1083 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 PDZD7Q9H5P4 517 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 RNF19AQ9NV58 838 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 F5H0A9 414 aaPredicted RBP11.26□□□□□ -0.61
NPHP4-202ENST00000378161 CREBL2O60519 120 aaPredicted RBP11.26□□□□□ -0.61
NPHP4-202ENST00000378161 C5AR1P21730 350 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 FAUP35544 74 aaKnown RBP11.26□□□□□ -0.61
NPHP4-202ENST00000378161 CASP9P55211 416 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 SOX4Q06945 474 aaPredicted RBP11.26□□□□□ -0.61
NPHP4-202ENST00000378161 SNTB2Q13425 540 aaKnown RBP11.26□□□□□ -0.61
NPHP4-202ENST00000378161 RNF219Q5W0B1 726 aaPredicted RBP11.26□□□□□ -0.61
NPHP4-202ENST00000378161 C9orf57Q5W0N0 161 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 GPR155Q7Z3F1 870 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 NRROSQ86YC3 692 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 SIGLEC10Q96LC7 697 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 ADGRE3Q9BY15 652 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 FBXO44Q9H4M3 255 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 MTMR11A4FU01 709 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 EFCAB7A8K855 629 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 MPTX1A8MV57 137 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 PPP1R2P9O14990 202 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 RGS11O94810 467 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 UBBP0CG47 229 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 UBCP0CG48 685 aaKnown RBP11.26□□□□□ -0.61
NPHP4-202ENST00000378161 ADH7P40394 386 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 RPS27AP62979 156 aaKnown RBP11.26□□□□□ -0.61
NPHP4-202ENST00000378161 UBA52P62987 128 aaKnown RBP11.26□□□□□ -0.61
NPHP4-202ENST00000378161 NPRL3Q12980 569 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 SLC10A6Q3KNW5 377 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 METAP1DQ6UB28 335 aaPredicted RBP11.26□□□□□ -0.61
NPHP4-202ENST00000378161 TOP6BLQ8N6T0 577 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 MED8Q96G25 268 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 SLC6A20Q9NP91 592 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 SIRT7Q9NRC8 400 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 FLRT1Q9NZU1 646 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 FARSAQ9Y285 508 aaKnown RBP11.26□□□□□ -0.61
NPHP4-202ENST00000378161 ALS2Q96Q42 1657 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms