RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 TBC1D23Q9NUY8 699 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 VDAC3Q9Y277 283 aa8.03□□□□□ -1.12
CRNKL1-202ENST00000377340 NPIPA5A0A0B4J1W7 369 aa8.02□□□□□ -1.12
CRNKL1-202ENST00000377340 NPIPA7E9PJI5 369 aa8.02□□□□□ -1.12
CRNKL1-202ENST00000377340 C11orf98E9PRG8 122 aa8.02□□□□□ -1.12
CRNKL1-202ENST00000377340 ADAMDEC1O15204 470 aa8.02□□□□□ -1.12
CRNKL1-202ENST00000377340 JRKO75564 520 aa8.02□□□□□ -1.12
CRNKL1-202ENST00000377340 NPIPA8P0DM63 369 aa8.02□□□□□ -1.12
CRNKL1-202ENST00000377340 ANPEPP15144 967 aa8.02□□□□□ -1.12
CRNKL1-202ENST00000377340 PIK3CBP42338 1070 aa8.02□□□□□ -1.12
CRNKL1-202ENST00000377340 FOLH1Q04609 750 aa8.02□□□□□ -1.12
CRNKL1-202ENST00000377340 BCL7AQ4VC05 210 aa8.02□□□□□ -1.12
CRNKL1-202ENST00000377340 PRAMEF17Q5VTA0 474 aa8.02□□□□□ -1.12
CRNKL1-202ENST00000377340 ATG9BQ674R7 924 aa8.02□□□□□ -1.12
CRNKL1-202ENST00000377340 TMEM184AQ6ZMB5 413 aa8.02□□□□□ -1.12
CRNKL1-202ENST00000377340 OR5T3Q8NGG3 340 aa8.02□□□□□ -1.12
CRNKL1-202ENST00000377340 OR4C6Q8NH72 309 aa8.02□□□□□ -1.12
CRNKL1-202ENST00000377340 WDR36Q8NI36 951 aaKnown RBP8.02□□□□□ -1.12
CRNKL1-202ENST00000377340 LRTOMTQ8WZ04 291 aa8.02□□□□□ -1.12
CRNKL1-202ENST00000377340 EFHD2Q96C19 240 aaPredicted RBP8.02□□□□□ -1.12
CRNKL1-202ENST00000377340 C3orf30Q96M34 536 aa8.02□□□□□ -1.12
CRNKL1-202ENST00000377340 ZNF570Q96NI8 536 aa8.02□□□□□ -1.12
CRNKL1-202ENST00000377340 YIPF3Q9GZM5 350 aa8.02□□□□□ -1.12
CRNKL1-202ENST00000377340 SEMA6CQ9H3T2 930 aa8.02□□□□□ -1.12
CRNKL1-202ENST00000377340 LRRN3Q9H3W5 708 aa8.02□□□□□ -1.12
CRNKL1-202ENST00000377340 EPS8L2Q9H6S3 715 aa8.02□□□□□ -1.12
CRNKL1-202ENST00000377340 AIG1Q9NVV5 245 aa8.02□□□□□ -1.12
CRNKL1-202ENST00000377340 CLN6Q9NWW5 311 aa8.02□□□□□ -1.12
CRNKL1-202ENST00000377340 EMCNQ9ULC0 261 aa8.02□□□□□ -1.12
CRNKL1-202ENST00000377340 DLEC1Q9Y238 1755 aa8.02□□□□□ -1.12
CRNKL1-202ENST00000377340 TDRD15B5MCY1 1934 aaKnown RBP8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 A0A1W2PQF6 199 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 EME2A4GXA9 379 aaPredicted RBP8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 MAN1A2O60476 641 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 ACPPP15309 386 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 ACADSP16219 412 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 SDC1P18827 310 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 UQCRC2P22695 453 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 TACR1P25103 407 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 CNR2P34972 360 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 LGALS3BPQ08380 585 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 MERTKQ12866 999 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 FZD2Q14332 565 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 NKAIN1Q4KMZ8 207 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 VWA2Q5GFL6 755 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 SLCO4C1Q6ZQN7 724 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 TREML1Q86YW5 311 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 PQLC1Q8N2U9 271 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 CBR4Q8N4T8 237 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 SLC5A8Q8N695 610 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 ZNF540Q8NDQ6 660 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 MAPKAP1Q9BPZ7 522 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 PELOQ9BRX2 385 aaKnown RBP8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 TRIM4Q9C037 500 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 TRIM2Q9C040 744 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 KCNN2Q9H2S1 579 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 C11orf16Q9NQ32 467 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 AKAP6Q13023 2319 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 SPAARA0A1B0GVQ0 90 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 FLRT2O43155 660 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 BRINP1O60477 761 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 TSPAN19P0C672 248 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 CKMT2P17540 419 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 CCNOP22674 350 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 IGFBP5P24593 272 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 CCL7P80098 99 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 SYT16Q17RD7 645 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 KLHL24Q6TFL4 600 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 OR14L1PQ8NHC6 308 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 CREB3L4Q8TEY5 395 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 GIPC3Q8TF64 312 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 PDLIM5Q96HC4 596 aaKnown RBP8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 MSLNLQ96KJ4 702 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 SLC6A16Q9GZN6 736 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 SPRTNQ9H040 489 aaPredicted RBP8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 DENND2DQ9H6A0 471 aaPredicted RBP8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 THUMPD1Q9NXG2 353 aaKnown RBP8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 TVP23BQ9NYZ1 205 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 PTGFRNQ9P2B2 879 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 B4GALT7Q9UBV7 327 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 MCM8Q9UJA3 840 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 TPRKBQ9Y3C4 175 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 SCN5AQ14524 2016 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 TRBV11-1A0A0K0K1C0 115 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 LOC100506127A0A0U1RQW1 187 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 OR2W5A6NFC9 320 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 SNX4O95219 450 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 HMGN2P05204 90 aaKnown RBP8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 SFTPDP35247 375 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 CSNK1G2P78368 415 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 CDKL4Q5MAI5 379 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 CCNJQ5T5M9 372 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 KIAA1614Q5VZ46 1190 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 C18orf63Q68DL7 685 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 FCRLBQ6BAA4 426 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 PAPD4Q6PIY7 484 aaKnown RBP8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 PELI3Q8N2H9 469 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 PIK3C3Q8NEB9 887 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 OR5D16Q8NGK9 328 aa8.02□□□□□ -1.13
CRNKL1-202ENST00000377340 TMCO6Q96DC7 493 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms