RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 PAK4O96013 591 aaPredicted RBP15.39■□□□□ 0.05
TRIM27-202ENST00000377199 SLC35G4P0C7Q5 338 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 OSMP13725 252 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 IL12RB1P42701 662 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 CCR8P51685 355 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 NCBP2P52298 156 aaKnown RBP eCLIP15.39■□□□□ 0.05
TRIM27-202ENST00000377199 MLLT1Q03111 559 aaPredicted RBP15.39■□□□□ 0.05
TRIM27-202ENST00000377199 ZNF770Q6IQ21 691 aaPredicted RBP15.39■□□□□ 0.05
TRIM27-202ENST00000377199 LCTLQ6UWM7 567 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 SHFQ7M4L6 423 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 ZNF367Q7RTV3 350 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 IQCHQ86VS3 1027 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 OR5P2Q8WZ92 322 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 MTERF3Q96E29 417 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 ZNF514Q96K75 400 aaPredicted RBP15.39■□□□□ 0.05
TRIM27-202ENST00000377199 POLR2J2Q9GZM3 115 aaKnown RBP15.39■□□□□ 0.05
TRIM27-202ENST00000377199 LHX9Q9NQ69 397 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 FBXW2Q9UKT8 454 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 GPR52Q9Y2T5 361 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 PLEKHM1Q9Y4G2 1056 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 PCDHGB6Q9Y5F9 930 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 PRAMEF27A3QJZ7 478 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 NDUFS4O43181 175 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 SELENBP1Q13228 472 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 ZMAT1Q5H9K5 638 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 NDUFAF5Q5TEU4 345 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 SAXO2Q658L1 398 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 CCBE1Q6UXH8 406 aaPredicted RBP15.39■□□□□ 0.05
TRIM27-202ENST00000377199 TRMT61AQ96FX7 289 aaKnown RBP15.39■□□□□ 0.05
TRIM27-202ENST00000377199 PPP1R16AQ96I34 528 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 OPALINQ96PE5 141 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 TSSK6Q9BXA6 273 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 ASPNQ9BXN1 380 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 KLHL31Q9H511 634 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 CERS4Q9HA82 394 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 SIRT3Q9NTG7 399 aaPredicted RBP15.39■□□□□ 0.05
TRIM27-202ENST00000377199 SPTBN5Q9NRC6 3674 aaKnown RBP15.39■□□□□ 0.05
TRIM27-202ENST00000377199 EDDM13A0A1B0GTR0 161 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 TMEM221A6NGB7 291 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 HMGA2P52926 109 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 HOXC5Q00444 222 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 EIF4HQ15056 248 aaKnown RBP15.39■□□□□ 0.05
TRIM27-202ENST00000377199 MLIPQ5VWP3 458 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 UNC5DQ6UXZ4 953 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 IKBIPQ70UQ0 350 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 LRRTM4Q86VH4 590 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 NUDT13Q86X67 352 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 CCDC116Q8IYX3 515 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 LINC01555Q8NAE3 123 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 MINDY2Q8NBR6 621 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 SPPL3Q8TCT6 385 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 SETD7Q8WTS6 366 aaKnown RBP15.39■□□□□ 0.05
TRIM27-202ENST00000377199 SMG7Q92540 1137 aaKnown RBP15.39■□□□□ 0.05
TRIM27-202ENST00000377199 OTUB2Q96DC9 234 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 CRELD1Q96HD1 420 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 DPH7Q9BTV6 452 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 MBNL1Q9NR56 388 aaKnown RBP15.39■□□□□ 0.05
TRIM27-202ENST00000377199 REV1Q9UBZ9 1251 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 TSC22D4Q9Y3Q8 395 aa15.39■□□□□ 0.05
TRIM27-202ENST00000377199 CSO75390 466 aaKnown RBP15.38■□□□□ 0.05
TRIM27-202ENST00000377199 RB1P06400 928 aa15.38■□□□□ 0.05
TRIM27-202ENST00000377199 RPS19P39019 145 aaKnown RBP15.38■□□□□ 0.05
TRIM27-202ENST00000377199 GJA8P48165 433 aa15.38■□□□□ 0.05
TRIM27-202ENST00000377199 ZNF91Q05481 1191 aa15.38■□□□□ 0.05
TRIM27-202ENST00000377199 DBPQ10586 325 aaPredicted RBP15.38■□□□□ 0.05
TRIM27-202ENST00000377199 TAB1Q15750 504 aa15.38■□□□□ 0.05
TRIM27-202ENST00000377199 CLEC12AQ5QGZ9 265 aa15.38■□□□□ 0.05
TRIM27-202ENST00000377199 ATAD3BQ5T9A4 648 aa15.38■□□□□ 0.05
TRIM27-202ENST00000377199 LINC00299Q6ZSB3 139 aa15.38■□□□□ 0.05
TRIM27-202ENST00000377199 ATCAYQ86WG3 371 aa15.38■□□□□ 0.05
TRIM27-202ENST00000377199 OR8K5Q8NH50 307 aa15.38■□□□□ 0.05
TRIM27-202ENST00000377199 OR5K2Q8NHB8 316 aa15.38■□□□□ 0.05
TRIM27-202ENST00000377199 ZBED6CLQ96FA7 236 aaPredicted RBP15.38■□□□□ 0.05
TRIM27-202ENST00000377199 TEFMQ96QE5 360 aaKnown RBP15.38■□□□□ 0.05
TRIM27-202ENST00000377199 BBS4Q96RK4 519 aa15.38■□□□□ 0.05
TRIM27-202ENST00000377199 FNDC11Q9BVV2 318 aa15.38■□□□□ 0.05
TRIM27-202ENST00000377199 TMEM245Q9H330 911 aa15.38■□□□□ 0.05
TRIM27-202ENST00000377199 TOR4AQ9NXH8 423 aa15.38■□□□□ 0.05
TRIM27-202ENST00000377199 IRAK3Q9Y616 596 aa15.38■□□□□ 0.05
TRIM27-202ENST00000377199 SPEGQ15772 3267 aa15.38■□□□□ 0.05
TRIM27-202ENST00000377199 PRKYO43930 277 aa15.38■□□□□ 0.05
TRIM27-202ENST00000377199 NR4A2P43354 598 aa15.38■□□□□ 0.05
TRIM27-202ENST00000377199 PXNP49023 591 aaPredicted RBP15.38■□□□□ 0.05
TRIM27-202ENST00000377199 RAB8AP61006 207 aa15.38■□□□□ 0.05
TRIM27-202ENST00000377199 CDK3Q00526 305 aa15.38■□□□□ 0.05
TRIM27-202ENST00000377199 MAP4K2Q12851 820 aa15.38■□□□□ 0.05
TRIM27-202ENST00000377199 IRF3Q14653 427 aa15.38■□□□□ 0.05
TRIM27-202ENST00000377199 SPHARQ15513 63 aa15.38■□□□□ 0.05
TRIM27-202ENST00000377199 GPAT3Q53EU6 434 aa15.38■□□□□ 0.05
TRIM27-202ENST00000377199 PGBD2Q6P3X8 592 aa15.38■□□□□ 0.05
TRIM27-202ENST00000377199 PODNL1Q6PEZ8 512 aa15.38■□□□□ 0.05
TRIM27-202ENST00000377199 UBE2J2Q8N2K1 259 aa15.38■□□□□ 0.05
TRIM27-202ENST00000377199 KLHL6Q8WZ60 621 aa15.38■□□□□ 0.05
TRIM27-202ENST00000377199 SLC35G5Q96KT7 338 aa15.38■□□□□ 0.05
TRIM27-202ENST00000377199 ZNF607Q96SK3 696 aa15.38■□□□□ 0.05
TRIM27-202ENST00000377199 GLIPR2Q9H4G4 154 aa15.38■□□□□ 0.05
TRIM27-202ENST00000377199 HHATLQ9HCP6 504 aa15.38■□□□□ 0.05
TRIM27-202ENST00000377199 GPR34Q9UPC5 381 aa15.38■□□□□ 0.05
TRIM27-202ENST00000377199 YARS2Q9Y2Z4 477 aaKnown RBP15.38■□□□□ 0.05
TRIM27-202ENST00000377199 KIAA1671Q9BY89 1806 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms