RNA–Protein interactions for RNA: ENST00000377153.5

UBE4B-203, Transcript of ubiquitination factor E4B, humanhuman

TSL 3 BASIC

Gene UBE4B, Length 1,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-203ENST00000377153 MARCOQ9UEW3 520 aaPredicted RBP13.53□□□□□ -0.24
UBE4B-203ENST00000377153 PPIEQ9UNP9 301 aaKnown RBP13.53□□□□□ -0.24
UBE4B-203ENST00000377153 EIF3LQ9Y262 564 aaKnown RBP13.53□□□□□ -0.24
UBE4B-203ENST00000377153 ATRXP46100 2492 aa13.53□□□□□ -0.24
UBE4B-203ENST00000377153 HDAC3O15379 428 aa13.52□□□□□ -0.25
UBE4B-203ENST00000377153 PDGFAP04085 211 aa13.52□□□□□ -0.25
UBE4B-203ENST00000377153 ATP1B1P05026 303 aa13.52□□□□□ -0.25
UBE4B-203ENST00000377153 SDC1P18827 310 aa13.52□□□□□ -0.25
UBE4B-203ENST00000377153 SOX11P35716 441 aa13.52□□□□□ -0.25
UBE4B-203ENST00000377153 KIAA0040Q15053 153 aa13.52□□□□□ -0.25
UBE4B-203ENST00000377153 RFTN2Q52LD8 501 aaPredicted RBP13.52□□□□□ -0.25
UBE4B-203ENST00000377153 ACER2Q5QJU3 275 aa13.52□□□□□ -0.25
UBE4B-203ENST00000377153 IGFL3Q6UXB1 125 aa13.52□□□□□ -0.25
UBE4B-203ENST00000377153 ATG14Q6ZNE5 492 aa13.52□□□□□ -0.25
UBE4B-203ENST00000377153 FAM9CQ8IZT9 166 aa13.52□□□□□ -0.25
UBE4B-203ENST00000377153 KIF2BQ8N4N8 673 aa13.52□□□□□ -0.25
UBE4B-203ENST00000377153 APCDD1LQ8NCL9 501 aa13.52□□□□□ -0.25
UBE4B-203ENST00000377153 NFAM1Q8NET5 270 aaPredicted RBP13.52□□□□□ -0.25
UBE4B-203ENST00000377153 OR1N1Q8NGS0 311 aa13.52□□□□□ -0.25
UBE4B-203ENST00000377153 ZNF75CPQ92670 426 aaPredicted RBP13.52□□□□□ -0.25
UBE4B-203ENST00000377153 PPWD1Q96BP3 646 aaKnown RBP13.52□□□□□ -0.25
UBE4B-203ENST00000377153 FCRL1Q96LA6 429 aa13.52□□□□□ -0.25
UBE4B-203ENST00000377153 TSSK3Q96PN8 268 aa13.52□□□□□ -0.25
UBE4B-203ENST00000377153 C1orf50Q9BV19 199 aa13.52□□□□□ -0.25
UBE4B-203ENST00000377153 NUF2Q9BZD4 464 aa13.52□□□□□ -0.25
UBE4B-203ENST00000377153 BRINP2Q9C0B6 783 aa13.52□□□□□ -0.25
UBE4B-203ENST00000377153 NOP53Q9NZM5 478 aaKnown RBP13.52□□□□□ -0.25
UBE4B-203ENST00000377153 HEY2Q9UBP5 337 aa13.52□□□□□ -0.25
UBE4B-203ENST00000377153 ANAPC2Q9UJX6 822 aa13.52□□□□□ -0.25
UBE4B-203ENST00000377153 TLN1Q9Y490 2541 aaKnown RBP13.52□□□□□ -0.25
UBE4B-203ENST00000377153 K7EM74 188 aa13.51□□□□□ -0.25
UBE4B-203ENST00000377153 ZFAND5O76080 213 aa13.51□□□□□ -0.25
UBE4B-203ENST00000377153 JUNP05412 331 aaKnown RBP13.51□□□□□ -0.25
UBE4B-203ENST00000377153 KITP10721 976 aa13.51□□□□□ -0.25
UBE4B-203ENST00000377153 PRPS2P11908 318 aa13.51□□□□□ -0.25
UBE4B-203ENST00000377153 MPIP34949 423 aa13.51□□□□□ -0.25
UBE4B-203ENST00000377153 FEN1P39748 380 aaKnown RBP13.51□□□□□ -0.25
UBE4B-203ENST00000377153 ERVK-8P63133 956 aa13.51□□□□□ -0.25
UBE4B-203ENST00000377153 OCRLQ01968 901 aa13.51□□□□□ -0.25
UBE4B-203ENST00000377153 ZNF267Q14586 743 aaPredicted RBP13.51□□□□□ -0.25
UBE4B-203ENST00000377153 SMU1Q2TAY7 513 aa13.51□□□□□ -0.25
UBE4B-203ENST00000377153 C6orf136Q5SQH8 315 aa13.51□□□□□ -0.25
UBE4B-203ENST00000377153 B3GNTL1Q67FW5 361 aaPredicted RBP13.51□□□□□ -0.25
UBE4B-203ENST00000377153 FAM71E1Q6IPT2 247 aa13.51□□□□□ -0.25
UBE4B-203ENST00000377153 RNF111Q6ZNA4 994 aa13.51□□□□□ -0.25
UBE4B-203ENST00000377153 SLC29A4Q7RTT9 530 aa13.51□□□□□ -0.25
UBE4B-203ENST00000377153 R3HCC1LQ7Z5L2 792 aaKnown RBP13.51□□□□□ -0.25
UBE4B-203ENST00000377153 RPS19BP1Q86WX3 136 aaKnown RBP13.51□□□□□ -0.25
UBE4B-203ENST00000377153 PTRH1Q86Y79 214 aaKnown RBP13.51□□□□□ -0.25
UBE4B-203ENST00000377153 TICAM1Q8IUC6 712 aa13.51□□□□□ -0.25
UBE4B-203ENST00000377153 LRRC34Q8IZ02 419 aa13.51□□□□□ -0.25
UBE4B-203ENST00000377153 MMP21Q8N119 569 aa13.51□□□□□ -0.25
UBE4B-203ENST00000377153 VWA5B2Q8N398 1253 aa13.51□□□□□ -0.25
UBE4B-203ENST00000377153 LIX1Q8N485 282 aa13.51□□□□□ -0.25
UBE4B-203ENST00000377153 OR5L2Q8NGL0 311 aa13.51□□□□□ -0.25
UBE4B-203ENST00000377153 OR8K3Q8NH51 312 aa13.51□□□□□ -0.25
UBE4B-203ENST00000377153 SUN3Q8TAQ9 357 aa13.51□□□□□ -0.25
UBE4B-203ENST00000377153 PIWIL2Q8TC59 973 aaKnown RBP13.51□□□□□ -0.25
UBE4B-203ENST00000377153 PSMF1Q92530 271 aa13.51□□□□□ -0.25
UBE4B-203ENST00000377153 PPCDCQ96CD2 204 aa13.51□□□□□ -0.25
UBE4B-203ENST00000377153 C3orf30Q96M34 536 aa13.51□□□□□ -0.25
UBE4B-203ENST00000377153 C7orf26Q96N11 449 aa13.51□□□□□ -0.25
UBE4B-203ENST00000377153 BBS4Q96RK4 519 aa13.51□□□□□ -0.25
UBE4B-203ENST00000377153 RNF32Q9H0A6 362 aa13.51□□□□□ -0.25
UBE4B-203ENST00000377153 CXorf21Q9HAI6 301 aa13.51□□□□□ -0.25
UBE4B-203ENST00000377153 SLC35C2Q9NQQ7 365 aa13.51□□□□□ -0.25
UBE4B-203ENST00000377153 PNPOQ9NVS9 261 aa13.51□□□□□ -0.25
UBE4B-203ENST00000377153 STMN3Q9NZ72 180 aa13.51□□□□□ -0.25
UBE4B-203ENST00000377153 GIMAP2Q9UG22 337 aa13.51□□□□□ -0.25
UBE4B-203ENST00000377153 CES1P1Q9UKY3 287 aa13.51□□□□□ -0.25
UBE4B-203ENST00000377153 ERVK-19Q9WJR5 959 aa13.51□□□□□ -0.25
UBE4B-203ENST00000377153 B3GNT3Q9Y2A9 372 aa13.51□□□□□ -0.25
UBE4B-203ENST00000377153 COL6A6A6NMZ7 2263 aa13.5□□□□□ -0.25
UBE4B-203ENST00000377153 WASHC1A8K0Z3 465 aa13.5□□□□□ -0.25
UBE4B-203ENST00000377153 DDAH2O95865 285 aa13.5□□□□□ -0.25
UBE4B-203ENST00000377153 PRB1P04280 392 aa13.5□□□□□ -0.25
UBE4B-203ENST00000377153 BCKDHAP12694 445 aa13.5□□□□□ -0.25
UBE4B-203ENST00000377153 C19orf57Q0VDD7 668 aa13.5□□□□□ -0.25
UBE4B-203ENST00000377153 TLR1Q15399 786 aa13.5□□□□□ -0.25
UBE4B-203ENST00000377153 FCRLBQ6BAA4 426 aa13.5□□□□□ -0.25
UBE4B-203ENST00000377153 H3F3CQ6NXT2 135 aa13.5□□□□□ -0.25
UBE4B-203ENST00000377153 IGFL2Q6UWQ7 119 aa13.5□□□□□ -0.25
UBE4B-203ENST00000377153 WDR75Q8IWA0 830 aaKnown RBP13.5□□□□□ -0.25
UBE4B-203ENST00000377153 BEST3Q8N1M1 668 aa13.5□□□□□ -0.25
UBE4B-203ENST00000377153 HORMAD2Q8N7B1 307 aa13.5□□□□□ -0.25
UBE4B-203ENST00000377153 CLHC1Q8NHS4 586 aa13.5□□□□□ -0.25
UBE4B-203ENST00000377153 ZFP28Q8NHY6 868 aa13.5□□□□□ -0.25
UBE4B-203ENST00000377153 ZNF721Q8TF20 911 aa13.5□□□□□ -0.25
UBE4B-203ENST00000377153 THAP3Q8WTV1 239 aaPredicted RBP13.5□□□□□ -0.25
UBE4B-203ENST00000377153 UCN3Q969E3 161 aa13.5□□□□□ -0.25
UBE4B-203ENST00000377153 GFM2Q969S9 779 aaKnown RBP13.5□□□□□ -0.25
UBE4B-203ENST00000377153 PNPLA2Q96AD5 504 aa13.5□□□□□ -0.25
UBE4B-203ENST00000377153 MTERF3Q96E29 417 aa13.5□□□□□ -0.25
UBE4B-203ENST00000377153 CNRIP1Q96F85 164 aaPredicted RBP13.5□□□□□ -0.25
UBE4B-203ENST00000377153 SENP5Q96HI0 755 aaPredicted RBP13.5□□□□□ -0.25
UBE4B-203ENST00000377153 GAL3ST4Q96RP7 486 aa13.5□□□□□ -0.25
UBE4B-203ENST00000377153 PRPF18Q99633 342 aaKnown RBP13.5□□□□□ -0.25
UBE4B-203ENST00000377153 UTP23Q9BRU9 249 aaKnown RBP13.5□□□□□ -0.25
UBE4B-203ENST00000377153 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.5□□□□□ -0.25
UBE4B-203ENST00000377153 MEAF6Q9HAF1 191 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms