RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 SLC11A1P49279 550 aa15.68■□□□□ 0.1
TRIM39-201ENST00000376656 PTPN5P54829 565 aa15.68■□□□□ 0.1
TRIM39-201ENST00000376656 TAS2R50P59544 299 aa15.68■□□□□ 0.1
TRIM39-201ENST00000376656 MRPL28Q13084 256 aaKnown RBP15.68■□□□□ 0.1
TRIM39-201ENST00000376656 KCNC3Q14003 757 aa15.68■□□□□ 0.1
TRIM39-201ENST00000376656 REEP3Q6NUK4 255 aa15.68■□□□□ 0.1
TRIM39-201ENST00000376656 TMPRSS11BQ86T26 416 aa15.68■□□□□ 0.1
TRIM39-201ENST00000376656 TMEM163Q8TC26 289 aa15.68■□□□□ 0.1
TRIM39-201ENST00000376656 NEIL2Q969S2 332 aa15.68■□□□□ 0.1
TRIM39-201ENST00000376656 DCLRE1CQ96SD1 692 aaKnown RBP15.68■□□□□ 0.1
TRIM39-201ENST00000376656 C2orf49Q9BVC5 232 aaPredicted RBP15.68■□□□□ 0.1
TRIM39-201ENST00000376656 MVB12BQ9H7P6 319 aa15.68■□□□□ 0.1
TRIM39-201ENST00000376656 GULP1Q9UBP9 304 aa15.68■□□□□ 0.1
TRIM39-201ENST00000376656 A0A1W2PRB8 838 aa15.67■□□□□ 0.1
TRIM39-201ENST00000376656 B8ZZF3 427 aa15.67■□□□□ 0.1
TRIM39-201ENST00000376656 SLC30A4O14863 429 aa15.67■□□□□ 0.1
TRIM39-201ENST00000376656 SLC43A1O75387 559 aa15.67■□□□□ 0.1
TRIM39-201ENST00000376656 SLC16A8O95907 504 aa15.67■□□□□ 0.1
TRIM39-201ENST00000376656 TGFB1P01137 390 aa15.67■□□□□ 0.1
TRIM39-201ENST00000376656 RPLP2P05387 115 aaKnown RBP15.67■□□□□ 0.1
TRIM39-201ENST00000376656 GSTM1P09488 218 aa15.67■□□□□ 0.1
TRIM39-201ENST00000376656 CD79BP40259 229 aa15.67■□□□□ 0.1
TRIM39-201ENST00000376656 AVPR1BP47901 424 aa15.67■□□□□ 0.1
TRIM39-201ENST00000376656 AGFG1P52594 562 aaKnown RBP15.67■□□□□ 0.1
TRIM39-201ENST00000376656 SMAD3P84022 425 aaKnown RBP15.67■□□□□ 0.1
TRIM39-201ENST00000376656 PDE7AQ13946 482 aa15.67■□□□□ 0.1
TRIM39-201ENST00000376656 CDONQ4KMG0 1287 aa15.67■□□□□ 0.1
TRIM39-201ENST00000376656 RASGRP3Q8IV61 690 aa15.67■□□□□ 0.1
TRIM39-201ENST00000376656 LILRA3Q8N6C8 439 aaPredicted RBP15.67■□□□□ 0.1
TRIM39-201ENST00000376656 LMNTD1Q8N9Z9 388 aa15.67■□□□□ 0.1
TRIM39-201ENST00000376656 ANKK1Q8NFD2 765 aa15.67■□□□□ 0.1
TRIM39-201ENST00000376656 C16orf78Q8WTQ4 265 aa15.67■□□□□ 0.1
TRIM39-201ENST00000376656 SENP5Q96HI0 755 aaPredicted RBP15.67■□□□□ 0.1
TRIM39-201ENST00000376656 ZNF582Q96NG8 517 aaPredicted RBP15.67■□□□□ 0.1
TRIM39-201ENST00000376656 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.67■□□□□ 0.1
TRIM39-201ENST00000376656 OR51B5Q9H339 312 aa15.67■□□□□ 0.1
TRIM39-201ENST00000376656 B3GNT2Q9NY97 397 aa15.67■□□□□ 0.1
TRIM39-201ENST00000376656 CLEC4EQ9ULY5 219 aa15.67■□□□□ 0.1
TRIM39-201ENST00000376656 STK25O00506 426 aa15.67■□□□□ 0.1
TRIM39-201ENST00000376656 ORC5O43913 435 aa15.67■□□□□ 0.1
TRIM39-201ENST00000376656 IGSF6O95976 241 aa15.67■□□□□ 0.1
TRIM39-201ENST00000376656 H1F0P07305 194 aaKnown RBP15.67■□□□□ 0.1
TRIM39-201ENST00000376656 TNFAIP8L2Q6P589 184 aaPredicted RBP15.67■□□□□ 0.1
TRIM39-201ENST00000376656 IDO2Q6ZQW0 420 aa15.67■□□□□ 0.1
TRIM39-201ENST00000376656 FAM26EQ8N5C1 309 aa15.67■□□□□ 0.1
TRIM39-201ENST00000376656 IL17RCQ8NAC3 791 aa15.67■□□□□ 0.1
TRIM39-201ENST00000376656 DOCK6Q96HP0 2047 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 INMT-MINDY4F8WBC2 141 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 FAAHO00519 579 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 SGTAO43765 313 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 TUFMP49411 452 aaKnown RBP15.66■□□□□ 0.1
TRIM39-201ENST00000376656 GAS1P54826 345 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 LSM11P83369 360 aaKnown RBP eCLIP15.66■□□□□ 0.1
TRIM39-201ENST00000376656 PLD1Q13393 1074 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 TYW3Q6IPR3 259 aaKnown RBP15.66■□□□□ 0.1
TRIM39-201ENST00000376656 ACSM5Q6NUN0 579 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 FAM92BQ6ZTR7 304 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 SHFQ7M4L6 423 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 SLC7A13Q8TCU3 470 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 SLC22A12Q96S37 553 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 ATF6BQ99941 703 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 SYT17Q9BSW7 474 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 WACQ9BTA9 647 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 TRAF4Q9BUZ4 470 aaPredicted RBP15.66■□□□□ 0.1
TRIM39-201ENST00000376656 IMPA1P29218 277 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 PREPP48147 710 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 EVX1P49640 407 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 CTBP2P56545 445 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 LRRC32Q14392 662 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 MED27Q6P2C8 311 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 UNC5DQ6UXZ4 953 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 SLC38A5Q8WUX1 472 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 AKAP1Q92667 903 aaKnown RBP eCLIP15.66■□□□□ 0.1
TRIM39-201ENST00000376656 OMA1Q96E52 524 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 CXorf36Q9H7Y0 433 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 PAK6Q9NQU5 681 aaPredicted RBP15.66■□□□□ 0.1
TRIM39-201ENST00000376656 ZSCAN32Q9NX65 697 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 SH2B3Q9UQQ2 575 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 NR2F6P10588 404 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 SOX18P35713 384 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 MAPK8P45983 427 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 UBE3AQ05086 875 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 TPBGQ13641 420 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 GINS1Q14691 196 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 ARHGEF6Q15052 776 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 SF3A2Q15428 464 aaKnown RBP15.66■□□□□ 0.1
TRIM39-201ENST00000376656 CCDC85BQ15834 202 aaPredicted RBP15.66■□□□□ 0.1
TRIM39-201ENST00000376656 TIGD4Q8IY51 512 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 HORMAD2Q8N7B1 307 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 FBXO22Q8NEZ5 403 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 ASZ1Q8WWH4 475 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 SCAMP4Q969E2 229 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 CCDC120Q96HB5 630 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 KCNJ15Q99712 375 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 POLDIP3Q9BY77 421 aaKnown RBP15.66■□□□□ 0.1
TRIM39-201ENST00000376656 GSTK1Q9Y2Q3 226 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 CDH10Q9Y6N8 788 aa15.66■□□□□ 0.1
TRIM39-201ENST00000376656 SHISA3A0PJX4 238 aa15.65■□□□□ 0.1
TRIM39-201ENST00000376656 FABP7O15540 132 aa15.65■□□□□ 0.1
TRIM39-201ENST00000376656 INPP1P49441 399 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms