RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 KIR3DP1A8MWS1 328 aa13.6□□□□□ -0.23
HDAC6-204ENST00000376643 SAP18O00422 153 aaKnown RBP13.6□□□□□ -0.23
HDAC6-204ENST00000376643 PROM1O43490 865 aa13.6□□□□□ -0.23
HDAC6-204ENST00000376643 SH3BGRLO75368 114 aa13.6□□□□□ -0.23
HDAC6-204ENST00000376643 KLHL2O95198 593 aa13.6□□□□□ -0.23
HDAC6-204ENST00000376643 SNX4O95219 450 aa13.6□□□□□ -0.23
HDAC6-204ENST00000376643 C1QAP02745 245 aa13.6□□□□□ -0.23
HDAC6-204ENST00000376643 FAM58BPP0C7Q3 252 aa13.6□□□□□ -0.23
HDAC6-204ENST00000376643 SLC35E2P0CK97 266 aa13.6□□□□□ -0.23
HDAC6-204ENST00000376643 GCKP35557 465 aa13.6□□□□□ -0.23
HDAC6-204ENST00000376643 ARL1P40616 181 aaPredicted RBP13.6□□□□□ -0.23
HDAC6-204ENST00000376643 HERVK_113P63132 956 aa13.6□□□□□ -0.23
HDAC6-204ENST00000376643 ERVK-8P63133 956 aa13.6□□□□□ -0.23
HDAC6-204ENST00000376643 CKAP4Q07065 602 aaKnown RBP13.6□□□□□ -0.23
HDAC6-204ENST00000376643 C2orf54Q08AI8 447 aa13.6□□□□□ -0.23
HDAC6-204ENST00000376643 GTF2H2Q13888 395 aa13.6□□□□□ -0.23
HDAC6-204ENST00000376643 ZNF267Q14586 743 aaPredicted RBP13.6□□□□□ -0.23
HDAC6-204ENST00000376643 HSPB2Q16082 182 aa13.6□□□□□ -0.23
HDAC6-204ENST00000376643 PFKFB4Q16877 469 aa13.6□□□□□ -0.23
HDAC6-204ENST00000376643 TMEM198Q66K66 360 aa13.6□□□□□ -0.23
HDAC6-204ENST00000376643 GTF2H2CQ6P1K8 395 aa13.6□□□□□ -0.23
HDAC6-204ENST00000376643 PAGE2Q7Z2X7 111 aa13.6□□□□□ -0.23
HDAC6-204ENST00000376643 CCDC71Q8IV32 467 aaPredicted RBP13.6□□□□□ -0.23
HDAC6-204ENST00000376643 OR4N5Q8IXE1 308 aa13.6□□□□□ -0.23
HDAC6-204ENST00000376643 PM20D2Q8IYS1 436 aa13.6□□□□□ -0.23
HDAC6-204ENST00000376643 ATP6V1E2Q96A05 226 aa13.6□□□□□ -0.23
HDAC6-204ENST00000376643 NXNL1Q96CM4 212 aa13.6□□□□□ -0.23
HDAC6-204ENST00000376643 DOHHQ9BU89 302 aa13.6□□□□□ -0.23
HDAC6-204ENST00000376643 ERVK-6Q9BXR3 956 aa13.6□□□□□ -0.23
HDAC6-204ENST00000376643 UCK2Q9BZX2 261 aa13.6□□□□□ -0.23
HDAC6-204ENST00000376643 WWTR1Q9GZV5 400 aa13.6□□□□□ -0.23
HDAC6-204ENST00000376643 NPDC1Q9NQX5 325 aaPredicted RBP13.6□□□□□ -0.23
HDAC6-204ENST00000376643 TNFRSF10DQ9UBN6 386 aa13.6□□□□□ -0.23
HDAC6-204ENST00000376643 ERVK-19Q9WJR5 959 aa13.6□□□□□ -0.23
HDAC6-204ENST00000376643 CFL2Q9Y281 166 aa13.6□□□□□ -0.23
HDAC6-204ENST00000376643 A0A096LPK6 155 aa13.59□□□□□ -0.23
HDAC6-204ENST00000376643 A0A0A6YYD5 115 aa13.59□□□□□ -0.23
HDAC6-204ENST00000376643 AHRRA9YTQ3 701 aa13.59□□□□□ -0.23
HDAC6-204ENST00000376643 CLDN9O95484 217 aa13.59□□□□□ -0.23
HDAC6-204ENST00000376643 C2P06681 752 aa13.59□□□□□ -0.23
HDAC6-204ENST00000376643 RBP1P09455 135 aa13.59□□□□□ -0.23
HDAC6-204ENST00000376643 GLI4P10075 376 aa13.59□□□□□ -0.23
HDAC6-204ENST00000376643 MTHFD2P13995 350 aa13.59□□□□□ -0.23
HDAC6-204ENST00000376643 PIK3R1P27986 724 aa13.59□□□□□ -0.23
HDAC6-204ENST00000376643 TYK2P29597 1187 aa13.59□□□□□ -0.23
HDAC6-204ENST00000376643 PIGAP37287 484 aa13.59□□□□□ -0.23
HDAC6-204ENST00000376643 HNRNPH2P55795 449 aaKnown RBP13.59□□□□□ -0.23
HDAC6-204ENST00000376643 RPS13P62277 151 aaKnown RBP13.59□□□□□ -0.23
HDAC6-204ENST00000376643 DLG1Q12959 904 aa13.59□□□□□ -0.23
HDAC6-204ENST00000376643 EBPQ15125 230 aaKnown RBP13.59□□□□□ -0.23
HDAC6-204ENST00000376643 RPS6KA2Q15349 733 aa13.59□□□□□ -0.23
HDAC6-204ENST00000376643 NTRK2Q16620 822 aa13.59□□□□□ -0.23
HDAC6-204ENST00000376643 CPSF6Q16630 551 aaKnown RBP eCLIP13.59□□□□□ -0.23
HDAC6-204ENST00000376643 MROH9Q5TGP6 573 aa13.59□□□□□ -0.23
HDAC6-204ENST00000376643 C18orf63Q68DL7 685 aa13.59□□□□□ -0.23
HDAC6-204ENST00000376643 LRRC25Q8N386 305 aaPredicted RBP13.59□□□□□ -0.23
HDAC6-204ENST00000376643 L3MBTL4Q8NA19 623 aa13.59□□□□□ -0.23
HDAC6-204ENST00000376643 C17orf47Q8NEP4 570 aa13.59□□□□□ -0.23
HDAC6-204ENST00000376643 NEIL3Q8TAT5 605 aa13.59□□□□□ -0.23
HDAC6-204ENST00000376643 KCTD4Q8WVF5 259 aa13.59□□□□□ -0.23
HDAC6-204ENST00000376643 IPPKQ9H8X2 491 aa13.59□□□□□ -0.23
HDAC6-204ENST00000376643 ALKBH4Q9NXW9 302 aa13.59□□□□□ -0.23
HDAC6-204ENST00000376643 FOXD3Q9UJU5 478 aaPredicted RBP13.59□□□□□ -0.23
HDAC6-204ENST00000376643 ADAM29Q9UKF5 820 aa13.59□□□□□ -0.23
HDAC6-204ENST00000376643 LIPGQ9Y5X9 500 aa13.59□□□□□ -0.23
HDAC6-204ENST00000376643 IKBKGQ9Y6K9 419 aa13.59□□□□□ -0.23
HDAC6-204ENST00000376643 ADGRG4Q8IZF6 3080 aa13.58□□□□□ -0.23
HDAC6-204ENST00000376643 PHF3Q92576 2039 aaKnown RBP13.58□□□□□ -0.24
HDAC6-204ENST00000376643 C2orf92A0A1B0GVN3 265 aa13.58□□□□□ -0.24
HDAC6-204ENST00000376643 DVL2O14641 736 aa13.58□□□□□ -0.24
HDAC6-204ENST00000376643 FAM155BO75949 473 aa13.58□□□□□ -0.24
HDAC6-204ENST00000376643 NADKO95544 446 aaPredicted RBP13.58□□□□□ -0.24
HDAC6-204ENST00000376643 KRT15P19012 456 aa13.58□□□□□ -0.24
HDAC6-204ENST00000376643 SLC37A1P57057 533 aa13.58□□□□□ -0.24
HDAC6-204ENST00000376643 MRPS25P82663 173 aaKnown RBP13.58□□□□□ -0.24
HDAC6-204ENST00000376643 TESK1Q15569 626 aa13.58□□□□□ -0.24
HDAC6-204ENST00000376643 TSNAXIP1Q2TAA8 658 aa13.58□□□□□ -0.24
HDAC6-204ENST00000376643 PRAMEF20Q5VT98 475 aa13.58□□□□□ -0.24
HDAC6-204ENST00000376643 TTC19Q6DKK2 380 aaPredicted RBP13.58□□□□□ -0.24
HDAC6-204ENST00000376643 MRM1Q6IN84 353 aaKnown RBP13.58□□□□□ -0.24
HDAC6-204ENST00000376643 PACS2Q86VP3 889 aa13.58□□□□□ -0.24
HDAC6-204ENST00000376643 GALNT12Q8IXK2 581 aa13.58□□□□□ -0.24
HDAC6-204ENST00000376643 CENPLQ8N0S6 344 aaPredicted RBP13.58□□□□□ -0.24
HDAC6-204ENST00000376643 RPRMLQ8N4K4 120 aa13.58□□□□□ -0.24
HDAC6-204ENST00000376643 OR7G1Q8NGA0 311 aa13.58□□□□□ -0.24
HDAC6-204ENST00000376643 DIO2Q92813 273 aa13.58□□□□□ -0.24
HDAC6-204ENST00000376643 NINJ1Q92982 152 aa13.58□□□□□ -0.24
HDAC6-204ENST00000376643 PPWD1Q96BP3 646 aaKnown RBP13.58□□□□□ -0.24
HDAC6-204ENST00000376643 JSRP1Q96MG2 331 aaPredicted RBP13.58□□□□□ -0.24
HDAC6-204ENST00000376643 NMRK1Q9NWW6 199 aa13.58□□□□□ -0.24
HDAC6-204ENST00000376643 MTRF1LQ9UGC7 380 aaKnown RBP13.58□□□□□ -0.24
HDAC6-204ENST00000376643 ASB4Q9Y574 426 aa13.58□□□□□ -0.24
HDAC6-204ENST00000376643 FAM215AQ9Y5M1 114 aa13.58□□□□□ -0.24
HDAC6-204ENST00000376643 CHCHD2Q9Y6H1 151 aaPredicted RBP13.58□□□□□ -0.24
HDAC6-204ENST00000376643 PDZD2O15018 2839 aa13.58□□□□□ -0.24
HDAC6-204ENST00000376643 ZNF407Q9C0G0 2248 aa13.58□□□□□ -0.24
HDAC6-204ENST00000376643 TEP1Q99973 2627 aaKnown RBP13.57□□□□□ -0.24
HDAC6-204ENST00000376643 A0A0G2JNJ9 132 aa13.57□□□□□ -0.24
HDAC6-204ENST00000376643 GOLGA6L10A6NI86 522 aa13.57□□□□□ -0.24
HDAC6-204ENST00000376643 STX16-NPEPL1H3BU86 382 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms