RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 THUMPD1Q9NXG2 353 aaKnown RBP16.65■□□□□ 0.26
CTTN-203ENST00000376561 RAB23Q9ULC3 237 aa16.65■□□□□ 0.26
CTTN-203ENST00000376561 PADI2Q9Y2J8 665 aa16.65■□□□□ 0.26
CTTN-203ENST00000376561 CSNK1G3Q9Y6M4 447 aa16.65■□□□□ 0.26
CTTN-203ENST00000376561 PCDH15Q96QU1 1955 aa16.65■□□□□ 0.26
CTTN-203ENST00000376561 PLOD2O00469 737 aa16.65■□□□□ 0.26
CTTN-203ENST00000376561 SRPX2O60687 465 aaPredicted RBP16.65■□□□□ 0.26
CTTN-203ENST00000376561 HPRP00739 348 aa16.65■□□□□ 0.26
CTTN-203ENST00000376561 OR12D1P0DN82 309 aa16.65■□□□□ 0.26
CTTN-203ENST00000376561 MATN1P21941 496 aa16.65■□□□□ 0.26
CTTN-203ENST00000376561 ALDH4A1P30038 563 aa16.65■□□□□ 0.26
CTTN-203ENST00000376561 XKP51811 444 aa16.65■□□□□ 0.26
CTTN-203ENST00000376561 PRR5P85299 388 aa16.65■□□□□ 0.26
CTTN-203ENST00000376561 PPP2R2BQ00005 443 aa16.65■□□□□ 0.26
CTTN-203ENST00000376561 MAPK11Q15759 364 aa16.65■□□□□ 0.26
CTTN-203ENST00000376561 PMS2CLQ68D20 193 aa16.65■□□□□ 0.26
CTTN-203ENST00000376561 LRRC25Q8N386 305 aaPredicted RBP16.65■□□□□ 0.26
CTTN-203ENST00000376561 OR56A1Q8NGH5 318 aa16.65■□□□□ 0.26
CTTN-203ENST00000376561 SPPL2AQ8TCT8 520 aa16.65■□□□□ 0.26
CTTN-203ENST00000376561 RAB33BQ9H082 229 aa16.65■□□□□ 0.26
CTTN-203ENST00000376561 SPACA6W5XKT8 324 aa16.65■□□□□ 0.26
CTTN-203ENST00000376561 SCN2AQ99250 2005 aa16.64■□□□□ 0.25
CTTN-203ENST00000376561 TLCD2A6NGC4 264 aa16.64■□□□□ 0.25
CTTN-203ENST00000376561 EMC8O43402 210 aa16.64■□□□□ 0.25
CTTN-203ENST00000376561 PGM3O95394 542 aa16.64■□□□□ 0.25
CTTN-203ENST00000376561 HMGN2P05204 90 aaKnown RBP16.64■□□□□ 0.25
CTTN-203ENST00000376561 MC3RP41968 323 aa16.64■□□□□ 0.25
CTTN-203ENST00000376561 MAGEA8P43361 318 aa16.64■□□□□ 0.25
CTTN-203ENST00000376561 ITGA1P56199 1179 aa16.64■□□□□ 0.25
CTTN-203ENST00000376561 BNC1Q01954 994 aa16.64■□□□□ 0.25
CTTN-203ENST00000376561 LTB4RQ15722 352 aa16.64■□□□□ 0.25
CTTN-203ENST00000376561 PRTGQ2VWP7 1150 aa16.64■□□□□ 0.25
CTTN-203ENST00000376561 IFI44LQ53G44 452 aa16.64■□□□□ 0.25
CTTN-203ENST00000376561 RPS26P11Q5JNZ5 115 aaPredicted RBP16.64■□□□□ 0.25
CTTN-203ENST00000376561 NKAIN2Q5VXU1 208 aa16.64■□□□□ 0.25
CTTN-203ENST00000376561 HIPK1Q86Z02 1210 aa16.64■□□□□ 0.25
CTTN-203ENST00000376561 OR4N5Q8IXE1 308 aa16.64■□□□□ 0.25
CTTN-203ENST00000376561 SHISA5Q8N114 240 aa16.64■□□□□ 0.25
CTTN-203ENST00000376561 DHRSXQ8N5I4 330 aa16.64■□□□□ 0.25
CTTN-203ENST00000376561 ARL10Q8N8L6 244 aa16.64■□□□□ 0.25
CTTN-203ENST00000376561 NCSTNQ92542 709 aa16.64■□□□□ 0.25
CTTN-203ENST00000376561 ELF4Q99607 663 aaPredicted RBP16.64■□□□□ 0.25
CTTN-203ENST00000376561 SMURF2Q9HAU4 748 aa16.64■□□□□ 0.25
CTTN-203ENST00000376561 C3orf14Q9HBI5 128 aa16.64■□□□□ 0.25
CTTN-203ENST00000376561 USE1Q9NZ43 259 aa16.64■□□□□ 0.25
CTTN-203ENST00000376561 TRPC4Q9UBN4 977 aa16.64■□□□□ 0.25
CTTN-203ENST00000376561 EPHA6Q9UF33 1036 aa16.64■□□□□ 0.25
CTTN-203ENST00000376561 GNAO1P09471 354 aa16.64■□□□□ 0.25
CTTN-203ENST00000376561 GIMD1P0DJR0 217 aa16.64■□□□□ 0.25
CTTN-203ENST00000376561 GNSP15586 552 aa16.64■□□□□ 0.25
CTTN-203ENST00000376561 TNFRSF1BP20333 461 aa16.64■□□□□ 0.25
CTTN-203ENST00000376561 MYBPC1Q00872 1141 aa16.64■□□□□ 0.25
CTTN-203ENST00000376561 LASP1Q14847 261 aaKnown RBP16.64■□□□□ 0.25
CTTN-203ENST00000376561 SHQ1Q6PI26 577 aaKnown RBP16.64■□□□□ 0.25
CTTN-203ENST00000376561 USP53Q70EK8 1073 aa16.64■□□□□ 0.25
CTTN-203ENST00000376561 TSEN54Q7Z6J9 526 aaKnown RBP16.64■□□□□ 0.25
CTTN-203ENST00000376561 CA13Q8N1Q1 262 aa16.64■□□□□ 0.25
CTTN-203ENST00000376561 SMYD1Q8NB12 490 aa16.64■□□□□ 0.25
CTTN-203ENST00000376561 XAGE5Q8WWM1 108 aa16.64■□□□□ 0.25
CTTN-203ENST00000376561 CYGBQ8WWM9 190 aa16.64■□□□□ 0.25
CTTN-203ENST00000376561 RBM4BQ9BQ04 359 aaKnown RBP16.64■□□□□ 0.25
CTTN-203ENST00000376561 RBM4Q9BWF3 364 aaKnown RBP16.64■□□□□ 0.25
CTTN-203ENST00000376561 ANKHQ9HCJ1 492 aa16.64■□□□□ 0.25
CTTN-203ENST00000376561 P2RX2Q9UBL9 471 aa16.64■□□□□ 0.25
CTTN-203ENST00000376561 CACNA1EQ15878 2313 aa16.63■□□□□ 0.25
CTTN-203ENST00000376561 IGHV5-51A0A0C4DH38 117 aa16.63■□□□□ 0.25
CTTN-203ENST00000376561 PRAMEF27A3QJZ7 478 aa16.63■□□□□ 0.25
CTTN-203ENST00000376561 TMEM247A6NEH6 219 aa16.63■□□□□ 0.25
CTTN-203ENST00000376561 SGK494L7N484 410 aa16.63■□□□□ 0.25
CTTN-203ENST00000376561 CYR61O00622 381 aa16.63■□□□□ 0.25
CTTN-203ENST00000376561 LAMTOR5O43504 91 aa16.63■□□□□ 0.25
CTTN-203ENST00000376561 NUDT21O43809 227 aaKnown RBP16.63■□□□□ 0.25
CTTN-203ENST00000376561 THRBP10828 461 aa16.63■□□□□ 0.25
CTTN-203ENST00000376561 PRKACGP22612 351 aa16.63■□□□□ 0.25
CTTN-203ENST00000376561 CAPGP40121 348 aa16.63■□□□□ 0.25
CTTN-203ENST00000376561 KHKP50053 298 aa16.63■□□□□ 0.25
CTTN-203ENST00000376561 SHC2P98077 582 aa16.63■□□□□ 0.25
CTTN-203ENST00000376561 SHBQ15464 509 aa16.63■□□□□ 0.25
CTTN-203ENST00000376561 ISLR2Q6UXK2 745 aa16.63■□□□□ 0.25
CTTN-203ENST00000376561 SLC35F3Q8IY50 421 aa16.63■□□□□ 0.25
CTTN-203ENST00000376561 NUP43Q8NFH3 380 aa16.63■□□□□ 0.25
CTTN-203ENST00000376561 KAT2AQ92830 837 aa16.63■□□□□ 0.25
CTTN-203ENST00000376561 COL26A1Q96A83 441 aa16.63■□□□□ 0.25
CTTN-203ENST00000376561 ZDHHC12Q96GR4 267 aa16.63■□□□□ 0.25
CTTN-203ENST00000376561 NPLQ9BXD5 320 aaPredicted RBP16.63■□□□□ 0.25
CTTN-203ENST00000376561 ANKRA2Q9H9E1 313 aa16.63■□□□□ 0.25
CTTN-203ENST00000376561 DNAAF2Q9NVR5 837 aaKnown RBP16.63■□□□□ 0.25
CTTN-203ENST00000376561 IFT80Q9P2H3 777 aaPredicted RBP16.63■□□□□ 0.25
CTTN-203ENST00000376561 ZNF451Q9Y4E5 1061 aa16.63■□□□□ 0.25
CTTN-203ENST00000376561 TNRC6BQ9UPQ9 1833 aaKnown RBP16.63■□□□□ 0.25
CTTN-203ENST00000376561 DPM1O60762 260 aa16.62■□□□□ 0.25
CTTN-203ENST00000376561 MLLT3P42568 568 aaPredicted RBP16.62■□□□□ 0.25
CTTN-203ENST00000376561 OR1E2P47887 323 aa16.62■□□□□ 0.25
CTTN-203ENST00000376561 GABRA4P48169 554 aa16.62■□□□□ 0.25
CTTN-203ENST00000376561 RXRGP48443 463 aa16.62■□□□□ 0.25
CTTN-203ENST00000376561 ARRB1P49407 418 aaPredicted RBP16.62■□□□□ 0.25
CTTN-203ENST00000376561 ANXA11P50995 505 aaKnown RBP16.62■□□□□ 0.25
CTTN-203ENST00000376561 SYPL1Q16563 259 aa16.62■□□□□ 0.25
CTTN-203ENST00000376561 ANKRD34AQ69YU3 496 aa16.62■□□□□ 0.25
CTTN-203ENST00000376561 KRT80Q6KB66 452 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms