RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 FAM46AQ96IP4 442 aaKnown RBP13.68□□□□□ -0.22
TNFRSF1B-201ENST00000376259 CAPNS2Q96L46 248 aa13.68□□□□□ -0.22
TNFRSF1B-201ENST00000376259 SPHK2Q9NRA0 654 aa13.68□□□□□ -0.22
TNFRSF1B-201ENST00000376259 ZNF226Q9NYT6 803 aa13.68□□□□□ -0.22
TNFRSF1B-201ENST00000376259 PRKAG2Q9UGJ0 569 aa13.68□□□□□ -0.22
TNFRSF1B-201ENST00000376259 MAN2B2Q9Y2E5 1009 aa13.68□□□□□ -0.22
TNFRSF1B-201ENST00000376259 HSPE1-MOB4S4R3N1 261 aa13.68□□□□□ -0.22
TNFRSF1B-201ENST00000376259 TMEM221A6NGB7 291 aa13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 NOTOA8MTQ0 251 aa13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 TPD52L2O43399 206 aaKnown RBP13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 TIMP2P16035 220 aa13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 APEX1P27695 318 aaKnown RBP13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 SLAMF1Q13291 335 aa13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 ASCC1Q8N9N2 400 aaKnown RBP13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 OR8J2Q8NGG1 315 aa13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 OR51L1Q8NGJ5 315 aa13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 OR8D1Q8WZ84 308 aa13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 CNDP2Q96KP4 475 aaKnown RBP13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 NELL2Q99435 816 aa13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 EPYCQ99645 322 aa13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 TMEM175Q9BSA9 504 aa13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 DMRT3Q9NQL9 472 aa13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 CMAHPQ9Y471 501 aa13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 CLDN24A6NM45 220 aa13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 OR52A4PA6NMU1 304 aa13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 PRG2P13727 222 aa13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 RHCEP18577 417 aa13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 CCR4P51679 360 aa13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 SGCGQ13326 291 aa13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 TCEAL5Q5H9L2 206 aa13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 ZNF311Q5JNZ3 666 aa13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 CADM2Q8N3J6 435 aa13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 DENND6BQ8NEG7 585 aa13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 OR4F15Q8NGB8 312 aa13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 APH1BQ8WW43 257 aa13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 CWH43Q9H720 699 aa13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 ZFR2Q9UPR6 939 aaKnown RBP13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 PRR23D1E9PI22 279 aaPredicted RBP13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 MPC1LP0DKB6 136 aa13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 PRR23D2P0DMB1 279 aaPredicted RBP13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 SEC13P55735 322 aa13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 LCN1P1Q5VSP4 162 aa13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 ZDHHC20Q5W0Z9 365 aa13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 NXPE4Q6UWF7 544 aa13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 KLBQ86Z14 1044 aa13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 C9orf43Q8TAL5 461 aaPredicted RBP13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 UFD1Q92890 307 aa13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 VMP1Q96GC9 406 aa13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 FRMD6Q96NE9 622 aa13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 SLC22A4Q9H015 551 aa13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 TEX10Q9NXF1 929 aaPredicted RBP13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 HCFC2Q9Y5Z7 792 aa13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 SCN3AQ9NY46 2000 aa13.67□□□□□ -0.22
TNFRSF1B-201ENST00000376259 GUCY1B2O75343 617 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 REM1O75628 298 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 NTN1O95631 604 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 PRKAR1AP10644 381 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 BMP7P18075 431 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 TCTN1Q2MV58 587 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 DEFB115Q30KQ5 88 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 LRIT3Q3SXY7 679 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 FAM46CQ5VWP2 391 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 MZT2BQ6NZ67 158 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 LIPIQ6XZB0 460 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 ZNF783Q6ZMS7 281 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 ZNF367Q7RTV3 350 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 YAF2Q8IY57 180 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 CBARPQ8N350 705 aaPredicted RBP13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 Q8N402 240 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 MND1Q9BWT6 205 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 CHIAQ9BZP6 476 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 MRPL15Q9P015 296 aaKnown RBP13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 BACE2Q9Y5Z0 518 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 CDH23Q9H251 3354 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 LOC102723532A0A0G2JNH3 316 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 MEIOCA2RUB1 952 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 KMOO15229 486 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 CAPN5O15484 640 aaPredicted RBP13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 OR5F1O95221 314 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 MAN2A2P49641 1150 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 CLDN2P57739 230 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 TAP2Q03519 686 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 SP140Q13342 867 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 ZNF805Q5CZA5 627 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 AGAP6Q5VW22 663 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 SDE2Q6IQ49 451 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 TUBA3EQ6PEY2 450 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 SLCO4C1Q6ZQN7 724 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 RNF44Q7L0R7 432 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 PARS2Q7L3T8 475 aaKnown RBP13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 PARGQ86W56 976 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 GRHL3Q8TE85 626 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 AGAP4Q96P64 663 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 SECISBP2Q96T21 854 aaKnown RBP13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 FZD3Q9NPG1 666 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 ACER3Q9NUN7 267 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 ISPDA4D126 451 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 IL7P13232 177 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 C6P13671 934 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 NPPBP16860 134 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms