RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 PRSS48Q7RTY5 328 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 ADCK2Q7Z695 626 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 UBE3DQ7Z6J8 389 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 GALNT12Q8IXK2 581 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 IQCF2Q8IXL9 164 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 ANKK1Q8NFD2 765 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 ST6GAL2Q96JF0 529 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 NEDD4LQ96PU5 975 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 DEPDC7Q96QD5 511 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 NLNQ9BYT8 704 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 BTBD1Q9H0C5 482 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 C5AR2Q9P296 337 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 NDRG4Q9ULP0 352 aaKnown RBP13.26□□□□□ -0.29
MSH5-202ENST00000375740 TNFRSF11BO00300 401 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 RNGTTO60942 597 aaKnown RBP13.26□□□□□ -0.29
MSH5-202ENST00000375740 MAT2AP31153 395 aaKnown RBP13.26□□□□□ -0.29
MSH5-202ENST00000375740 TNFRSF4P43489 277 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 MANFP55145 182 aaKnown RBP13.26□□□□□ -0.29
MSH5-202ENST00000375740 PRDX1Q06830 199 aaKnown RBP13.26□□□□□ -0.29
MSH5-202ENST00000375740 NPRL3Q12980 569 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 KIAA1161Q6NSJ0 714 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 BPHLQ86WA6 291 aaPredicted RBP13.26□□□□□ -0.29
MSH5-202ENST00000375740 FAM20CQ8IXL6 584 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 RAB42Q8N4Z0 105 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 AMER3Q8N944 861 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 ZNF540Q8NDQ6 660 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 ZNF566Q969W8 418 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 RGMAQ96B86 450 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 APOL4Q9BPW4 351 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 BCL7BQ9BQE9 202 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 MCOLN1Q9GZU1 580 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 LYVE1Q9Y5Y7 322 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 HSPE1-MOB4S4R3N1 261 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 IGKV1-8A0A0C4DH67 115 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 NDUFS4O43181 175 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 TMPRSS11DO60235 418 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 SERPIND1P05546 499 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 ARAFP10398 606 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 GRK5P34947 590 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 CLK1P49759 484 aaKnown RBP13.26□□□□□ -0.29
MSH5-202ENST00000375740 GNG2P59768 71 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 RPP38P78345 283 aaKnown RBP13.26□□□□□ -0.29
MSH5-202ENST00000375740 KRT33BQ14525 404 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 HEPACAMQ14CZ8 416 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 CRB2Q5IJ48 1285 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 KIAA1614Q5VZ46 1190 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 OR2A1Q8NGT9 310 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 OR52J3Q8NH60 311 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 OR5P2Q8WZ92 322 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 UCN3Q969E3 161 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 MED30Q96HR3 178 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 QRFPRQ96P65 431 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 SNX18Q96RF0 628 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 TIMM29Q9BSF4 260 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 CDADC1Q9BWV3 514 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 FZD3Q9NPG1 666 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.26□□□□□ -0.293e-7■■□□□ 11.5
MSH5-202ENST00000375740 WBP11Q9Y2W2 641 aaKnown RBP13.26□□□□□ -0.29
MSH5-202ENST00000375740 ZNF451Q9Y4E5 1061 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 PRAMEF33A0A0G2JMD5 474 aa13.25□□□□□ -0.29
MSH5-202ENST00000375740 A0A0G2JN53 185 aa13.25□□□□□ -0.29
MSH5-202ENST00000375740 OR52A4PA6NMU1 304 aa13.25□□□□□ -0.29
MSH5-202ENST00000375740 HAT1O14929 419 aa13.25□□□□□ -0.29
MSH5-202ENST00000375740 ZW10O43264 779 aa13.25□□□□□ -0.29
MSH5-202ENST00000375740 IGFALSP35858 605 aa13.25□□□□□ -0.29
MSH5-202ENST00000375740 RAB28P51157 221 aa13.25□□□□□ -0.29
MSH5-202ENST00000375740 DSTNP60981 165 aa13.25□□□□□ -0.29
MSH5-202ENST00000375740 RPS26P62854 115 aaKnown RBP13.25□□□□□ -0.29
MSH5-202ENST00000375740 GPLD1P80108 840 aa13.25□□□□□ -0.29
MSH5-202ENST00000375740 ELOAQ14241 798 aaKnown RBP13.25□□□□□ -0.29
MSH5-202ENST00000375740 ZFP69Q49AA0 526 aa13.25□□□□□ -0.29
MSH5-202ENST00000375740 TSPYL5Q86VY4 417 aaPredicted RBP13.25□□□□□ -0.29
MSH5-202ENST00000375740 FEVQ99581 238 aa13.25□□□□□ -0.29
MSH5-202ENST00000375740 CENPOQ9BU64 300 aa13.25□□□□□ -0.29
MSH5-202ENST00000375740 PITHD1Q9GZP4 211 aaPredicted RBP13.25□□□□□ -0.29
MSH5-202ENST00000375740 RASSF1Q9NS23 344 aa13.25□□□□□ -0.29
MSH5-202ENST00000375740 RAB23Q9ULC3 237 aa13.25□□□□□ -0.29
MSH5-202ENST00000375740 SLC17A4Q9Y2C5 497 aa13.25□□□□□ -0.29
MSH5-202ENST00000375740 HEATR5BQ9P2D3 2071 aa13.25□□□□□ -0.29
MSH5-202ENST00000375740 TBC1D3DA0A087WVF3 549 aa13.25□□□□□ -0.29
MSH5-202ENST00000375740 TBC1D3IA0A087WXS9 549 aa13.25□□□□□ -0.29
MSH5-202ENST00000375740 TBC1D3EA0A087X179 549 aa13.25□□□□□ -0.29
MSH5-202ENST00000375740 TBC1D3KA0A087X1G2 549 aa13.25□□□□□ -0.29
MSH5-202ENST00000375740 TBC1D3FA6NER0 549 aaPredicted RBP13.25□□□□□ -0.29
MSH5-202ENST00000375740 TBC1D3LB9A6J9 549 aa13.25□□□□□ -0.29
MSH5-202ENST00000375740 PPM1DO15297 605 aa13.25□□□□□ -0.29
MSH5-202ENST00000375740 PDPK1O15530 556 aa13.25□□□□□ -0.29
MSH5-202ENST00000375740 PLRG1O43660 514 aaKnown RBP13.25□□□□□ -0.29
MSH5-202ENST00000375740 TBX19O60806 448 aa13.25□□□□□ -0.29
MSH5-202ENST00000375740 PRAMEF10O60809 474 aa13.25□□□□□ -0.29
MSH5-202ENST00000375740 TBC1D3HP0C7X1 549 aa13.25□□□□□ -0.29
MSH5-202ENST00000375740 PCBP3P57721 371 aaKnown RBP13.25□□□□□ -0.29
MSH5-202ENST00000375740 TMEM196Q5HYL7 178 aa13.25□□□□□ -0.29
MSH5-202ENST00000375740 TBC1D3GQ6DHY5 549 aa13.25□□□□□ -0.29
MSH5-202ENST00000375740 TBC1D3CQ6IPX1 549 aa13.25□□□□□ -0.29
MSH5-202ENST00000375740 CEACAM20Q6UY09 585 aa13.25□□□□□ -0.29
MSH5-202ENST00000375740 NUDT13Q86X67 352 aa13.25□□□□□ -0.29
MSH5-202ENST00000375740 CCDC71Q8IV32 467 aaPredicted RBP13.25□□□□□ -0.29
MSH5-202ENST00000375740 TBC1D3Q8IZP1 549 aaPredicted RBP13.25□□□□□ -0.29
MSH5-202ENST00000375740 CHAC2Q8WUX2 184 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms