RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 ABHD13Q7L211 337 aa11.33□□□□□ -0.6
LSM2-208ENST00000375661 RPS19BP1Q86WX3 136 aaKnown RBP11.33□□□□□ -0.6
LSM2-208ENST00000375661 OR2L5Q8NG80 312 aa11.33□□□□□ -0.6
LSM2-208ENST00000375661 PPP1R14CQ8TAE6 165 aa11.33□□□□□ -0.6
LSM2-208ENST00000375661 FAM57AQ8TBR7 257 aa11.33□□□□□ -0.6
LSM2-208ENST00000375661 ELP5Q8TE02 316 aa11.33□□□□□ -0.6
LSM2-208ENST00000375661 SELENOMQ8WWX9 145 aa11.33□□□□□ -0.6
LSM2-208ENST00000375661 GAL3ST3Q96A11 431 aa11.33□□□□□ -0.6
LSM2-208ENST00000375661 QRFPRQ96P65 431 aa11.33□□□□□ -0.6
LSM2-208ENST00000375661 CDCP1Q9H5V8 836 aa11.33□□□□□ -0.6
LSM2-208ENST00000375661 PRDM7Q9NQW5 492 aa11.33□□□□□ -0.6
LSM2-208ENST00000375661 HCN3Q9P1Z3 774 aa11.33□□□□□ -0.6
LSM2-208ENST00000375661 ZDHHC2Q9UIJ5 367 aa11.33□□□□□ -0.6
LSM2-208ENST00000375661 NAALAD2Q9Y3Q0 740 aa11.33□□□□□ -0.6
LSM2-208ENST00000375661 SERTM1A2A2V5 107 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 URADA6NGE7 173 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 ZNF860A6NHJ4 632 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 TMEM233B4DJY2 109 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 SAP18O00422 153 aaKnown RBP11.32□□□□□ -0.6
LSM2-208ENST00000375661 RTCAO00442 366 aaKnown RBP11.32□□□□□ -0.6
LSM2-208ENST00000375661 AZIN1O14977 448 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 MAN1A2O60476 641 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 ULK1O75385 1050 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 RDH16O75452 317 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 KRT6AP02538 564 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 KRT6BP04259 564 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 UROSP10746 265 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 NEFHP12036 1026 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 GRK2P25098 689 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 PTX3P26022 381 aaPredicted RBP11.32□□□□□ -0.6
LSM2-208ENST00000375661 CHRNB4P30926 498 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 PTGS2P35354 604 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 SLC1A6P48664 564 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 KRT6CP48668 564 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 CYB561P49447 251 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 ART1P52961 327 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 PLA2G16P53816 162 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 SKP1P63208 163 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 BTN3A2P78410 334 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 PHEXP78562 749 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 HSF1Q00613 529 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 STX3Q13277 289 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 CUL3Q13618 768 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 ABRAXAS2Q15018 415 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 UGT3A2Q3SY77 523 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 TMEM35AQ53FP2 167 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 KANK2Q63ZY3 851 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 CLEC6AQ6EIG7 209 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 NIPAL1Q6NVV3 410 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 SCIMPQ6UWF3 145 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 CHSY3Q70JA7 882 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 FGD2Q7Z6J4 655 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 CLYBLQ8N0X4 340 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 OR5T3Q8NGG3 340 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 LILRB4Q8NHJ6 448 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 TMEM125Q96AQ2 219 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 HBEGFQ99075 208 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 SORT1Q99523 831 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 SORBS1Q9BX66 1292 aaKnown RBP11.32□□□□□ -0.6
LSM2-208ENST00000375661 ZNF717Q9BY31 904 aaPredicted RBP11.32□□□□□ -0.6
LSM2-208ENST00000375661 EML4Q9HC35 981 aaKnown RBP11.32□□□□□ -0.6
LSM2-208ENST00000375661 KCNN3Q9UGI6 736 aa11.32□□□□□ -0.6
LSM2-208ENST00000375661 KLF13Q9Y2Y9 288 aaPredicted RBP11.32□□□□□ -0.6
LSM2-208ENST00000375661 NF1P21359 2839 aa11.31□□□□□ -0.6
LSM2-208ENST00000375661 KLRC4-KLRK1H3BQV0 150 aa11.31□□□□□ -0.6
LSM2-208ENST00000375661 PLPP1O14494 284 aa11.31□□□□□ -0.6
LSM2-208ENST00000375661 CRCPO75575 148 aa11.31□□□□□ -0.6
LSM2-208ENST00000375661 SCELO95171 688 aa11.31□□□□□ -0.6
LSM2-208ENST00000375661 HSPA4LO95757 839 aa11.31□□□□□ -0.6
LSM2-208ENST00000375661 TPOP07202 933 aa11.31□□□□□ -0.6
LSM2-208ENST00000375661 JAK1P23458 1154 aa11.31□□□□□ -0.6
LSM2-208ENST00000375661 TPP2P29144 1249 aaPredicted RBP11.31□□□□□ -0.6
LSM2-208ENST00000375661 TRHRP34981 398 aaPredicted RBP11.31□□□□□ -0.6
LSM2-208ENST00000375661 PTGER1P34995 402 aa11.31□□□□□ -0.6
LSM2-208ENST00000375661 OR4D2P58180 307 aa11.31□□□□□ -0.6
LSM2-208ENST00000375661 OLR1P78380 273 aa11.31□□□□□ -0.6
LSM2-208ENST00000375661 RUNX2Q13950 521 aa11.31□□□□□ -0.6
LSM2-208ENST00000375661 RNFT1Q5M7Z0 435 aa11.31□□□□□ -0.6
LSM2-208ENST00000375661 SH2D4BQ5SQS7 431 aa11.31□□□□□ -0.6
LSM2-208ENST00000375661 TRIM40Q6P9F5 258 aa11.31□□□□□ -0.6
LSM2-208ENST00000375661 C3P1Q6ZMU1 363 aa11.31□□□□□ -0.6
LSM2-208ENST00000375661 ZNF793Q6ZN11 406 aa11.31□□□□□ -0.6
LSM2-208ENST00000375661 DMRTC2Q8IXT2 367 aaPredicted RBP11.31□□□□□ -0.6
LSM2-208ENST00000375661 ARMC10Q8N2F6 343 aa11.31□□□□□ -0.6
LSM2-208ENST00000375661 CPSF7Q8N684 471 aaKnown RBP11.31□□□□□ -0.6
LSM2-208ENST00000375661 C16orf52Q8NHV5 167 aa11.31□□□□□ -0.6
LSM2-208ENST00000375661 SERPINI1Q99574 410 aa11.31□□□□□ -0.6
LSM2-208ENST00000375661 ZNF559Q9BR84 538 aa11.31□□□□□ -0.6
LSM2-208ENST00000375661 TBCDQ9BTW9 1192 aa11.31□□□□□ -0.6
LSM2-208ENST00000375661 TMUB1Q9BVT8 246 aa11.31□□□□□ -0.6
LSM2-208ENST00000375661 ACPTQ9BZG2 426 aa11.31□□□□□ -0.6
LSM2-208ENST00000375661 TP63Q9H3D4 680 aaPredicted RBP11.31□□□□□ -0.6
LSM2-208ENST00000375661 TUBB1Q9H4B7 451 aa11.31□□□□□ -0.6
LSM2-208ENST00000375661 MANSC1Q9H8J5 431 aa11.31□□□□□ -0.6
LSM2-208ENST00000375661 BRF2Q9HAW0 419 aa11.31□□□□□ -0.6
LSM2-208ENST00000375661 MED4Q9NPJ6 270 aa11.31□□□□□ -0.6
LSM2-208ENST00000375661 LANCL2Q9NS86 450 aa11.31□□□□□ -0.6
LSM2-208ENST00000375661 FIS1Q9Y3D6 152 aa11.31□□□□□ -0.6
LSM2-208ENST00000375661 TRAF6Q9Y4K3 522 aa11.31□□□□□ -0.6
LSM2-208ENST00000375661 DNAJC15Q9Y5T4 150 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms