RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 BTBD16Q32M84 506 aa20.07■□□□□ 0.8
UPF3A-202ENST00000375299 QSOX2Q6ZRP7 698 aa20.07■□□□□ 0.8
UPF3A-202ENST00000375299 LILRA3Q8N6C8 439 aaPredicted RBP20.07■□□□□ 0.8
UPF3A-202ENST00000375299 OR52P1PQ8NH57 321 aa20.07■□□□□ 0.8
UPF3A-202ENST00000375299 SLC38A5Q8WUX1 472 aa20.07■□□□□ 0.8
UPF3A-202ENST00000375299 C1GALT1C1Q96EU7 318 aa20.07■□□□□ 0.8
UPF3A-202ENST00000375299 TRAF4Q9BUZ4 470 aaPredicted RBP20.07■□□□□ 0.8
UPF3A-202ENST00000375299 RSPO3Q9BXY4 272 aaPredicted RBP20.07■□□□□ 0.8
UPF3A-202ENST00000375299 STMN3Q9NZ72 180 aa20.07■□□□□ 0.8
UPF3A-202ENST00000375299 KIF26AQ9ULI4 1882 aaPredicted RBP20.06■□□□□ 0.8
UPF3A-202ENST00000375299 IL3P08700 152 aa20.06■□□□□ 0.8
UPF3A-202ENST00000375299 PRKAR1AP10644 381 aa20.06■□□□□ 0.8
UPF3A-202ENST00000375299 OR3A3P47888 321 aa20.06■□□□□ 0.8
UPF3A-202ENST00000375299 ALDH6A1Q02252 535 aaKnown RBP20.06■□□□□ 0.8
UPF3A-202ENST00000375299 CRTC2Q53ET0 693 aaPredicted RBP20.06■□□□□ 0.8
UPF3A-202ENST00000375299 SYT14P1Q58G82 188 aa20.06■□□□□ 0.8
UPF3A-202ENST00000375299 Q8N402 240 aa20.06■□□□□ 0.8
UPF3A-202ENST00000375299 FAM109AQ8N4B1 249 aa20.06■□□□□ 0.8
UPF3A-202ENST00000375299 HORMAD2Q8N7B1 307 aa20.06■□□□□ 0.8
UPF3A-202ENST00000375299 ZBED6CLQ96FA7 236 aaPredicted RBP20.06■□□□□ 0.8
UPF3A-202ENST00000375299 TMEM19Q96HH6 336 aa20.06■□□□□ 0.8
UPF3A-202ENST00000375299 SLC6A16Q9GZN6 736 aa20.06■□□□□ 0.8
UPF3A-202ENST00000375299 A4GALTQ9NPC4 353 aa20.06■□□□□ 0.8
UPF3A-202ENST00000375299 PLXNA2O75051 1894 aa20.06■□□□□ 0.8
UPF3A-202ENST00000375299 SLC30A4O14863 429 aa20.06■□□□□ 0.8
UPF3A-202ENST00000375299 KLK1P06870 262 aa20.06■□□□□ 0.8
UPF3A-202ENST00000375299 FAM157BP0CG42 384 aa20.06■□□□□ 0.8
UPF3A-202ENST00000375299 NR2F6P10588 404 aa20.06■□□□□ 0.8
UPF3A-202ENST00000375299 MYL12AP19105 171 aa20.06■□□□□ 0.8
UPF3A-202ENST00000375299 CLDN20P56880 219 aa20.06■□□□□ 0.8
UPF3A-202ENST00000375299 TBPL1P62380 186 aa20.06■□□□□ 0.8
UPF3A-202ENST00000375299 RPS26P62854 115 aaKnown RBP20.06■□□□□ 0.8
UPF3A-202ENST00000375299 C3orf38Q5JPI3 329 aa20.06■□□□□ 0.8
UPF3A-202ENST00000375299 SLC25A30Q5SVS4 291 aa20.06■□□□□ 0.8
UPF3A-202ENST00000375299 CNIH2Q6PI25 160 aa20.06■□□□□ 0.8
UPF3A-202ENST00000375299 ZNF767PQ75MW2 155 aa20.06■□□□□ 0.8
UPF3A-202ENST00000375299 RBM45Q8IUH3 476 aaKnown RBP20.06■□□□□ 0.8
UPF3A-202ENST00000375299 ELMOD2Q8IZ81 293 aa20.06■□□□□ 0.8
UPF3A-202ENST00000375299 TP53I13Q8NBR0 393 aaPredicted RBP20.06■□□□□ 0.8
UPF3A-202ENST00000375299 OR5H6Q8NGV6 325 aa20.06■□□□□ 0.8
UPF3A-202ENST00000375299 FIBINQ8TAL6 211 aa20.06■□□□□ 0.8
UPF3A-202ENST00000375299 ZNF582Q96NG8 517 aaPredicted RBP20.06■□□□□ 0.8
UPF3A-202ENST00000375299 SOSTQ9BQB4 213 aa20.06■□□□□ 0.8
UPF3A-202ENST00000375299 GTPBP2Q9BX10 602 aaKnown RBP20.06■□□□□ 0.8
UPF3A-202ENST00000375299 CPEB1Q9BZB8 566 aaKnown RBP20.06■□□□□ 0.8
UPF3A-202ENST00000375299 PPP1R3EQ9H7J1 279 aa20.06■□□□□ 0.8
UPF3A-202ENST00000375299 SEMA3GQ9NS98 782 aa20.06■□□□□ 0.8
UPF3A-202ENST00000375299 ING3Q9NXR8 418 aa20.06■□□□□ 0.8
UPF3A-202ENST00000375299 COMMD3Q9UBI1 195 aa20.06■□□□□ 0.8
UPF3A-202ENST00000375299 SH2B3Q9UQQ2 575 aa20.06■□□□□ 0.8
UPF3A-202ENST00000375299 PIPSLA2A3N6 862 aa20.05■□□□□ 0.8
UPF3A-202ENST00000375299 DDX5P17844 614 aaKnown RBP20.05■□□□□ 0.8
UPF3A-202ENST00000375299 PKLRP30613 574 aa20.05■□□□□ 0.8
UPF3A-202ENST00000375299 OR2G6Q5TZ20 316 aa20.05■□□□□ 0.8
UPF3A-202ENST00000375299 TNFAIP8L2Q6P589 184 aaPredicted RBP20.05■□□□□ 0.8
UPF3A-202ENST00000375299 DPY19L3Q6ZPD9 716 aa20.05■□□□□ 0.8
UPF3A-202ENST00000375299 TET1Q8NFU7 2136 aa20.05■□□□□ 0.8
UPF3A-202ENST00000375299 ZNF461Q8TAF7 563 aa20.05■□□□□ 0.8
UPF3A-202ENST00000375299 TMEM163Q8TC26 289 aa20.05■□□□□ 0.8
UPF3A-202ENST00000375299 TM9SF4Q92544 642 aa20.05■□□□□ 0.8
UPF3A-202ENST00000375299 WDR34Q96EX3 536 aa20.05■□□□□ 0.8
UPF3A-202ENST00000375299 LRR1Q96L50 414 aa20.05■□□□□ 0.8
UPF3A-202ENST00000375299 FAM83CQ9BQN1 747 aa20.05■□□□□ 0.8
UPF3A-202ENST00000375299 FUZQ9BT04 418 aa20.05■□□□□ 0.8
UPF3A-202ENST00000375299 EFCAB11Q9BUY7 163 aa20.05■□□□□ 0.8
UPF3A-202ENST00000375299 VN1R3Q9BXE9 311 aa20.05■□□□□ 0.8
UPF3A-202ENST00000375299 MKRN2Q9H000 416 aaKnown RBP20.05■□□□□ 0.8
UPF3A-202ENST00000375299 MIEF1Q9NQG6 463 aa20.05■□□□□ 0.8
UPF3A-202ENST00000375299 ZSCAN32Q9NX65 697 aa20.05■□□□□ 0.8
UPF3A-202ENST00000375299 TAAR2Q9P1P5 351 aa20.05■□□□□ 0.8
UPF3A-202ENST00000375299 GSTK1Q9Y2Q3 226 aa20.05■□□□□ 0.8
UPF3A-202ENST00000375299 PCDHGB7Q9Y5F8 929 aa20.05■□□□□ 0.8
UPF3A-202ENST00000375299 CLCA3PQ9Y6N3 262 aa20.05■□□□□ 0.8
UPF3A-202ENST00000375299 C12orf71A8MTZ7 269 aa20.05■□□□□ 0.8
UPF3A-202ENST00000375299 LRRTM2O43300 516 aa20.05■□□□□ 0.8
UPF3A-202ENST00000375299 HOXA2O43364 376 aa20.05■□□□□ 0.8
UPF3A-202ENST00000375299 OR2B3O76000 313 aa20.05■□□□□ 0.8
UPF3A-202ENST00000375299 EFEMP2O95967 443 aa20.05■□□□□ 0.8
UPF3A-202ENST00000375299 CCL23P55773 120 aa20.05■□□□□ 0.8
UPF3A-202ENST00000375299 CAV3P56539 151 aa20.05■□□□□ 0.8
UPF3A-202ENST00000375299 TPBGQ13641 420 aa20.05■□□□□ 0.8
UPF3A-202ENST00000375299 KLHL22Q53GT1 634 aa20.05■□□□□ 0.8
UPF3A-202ENST00000375299 TXNDC8Q6A555 127 aa20.05■□□□□ 0.8
UPF3A-202ENST00000375299 HSD11B1LQ7Z5J1 315 aa20.05■□□□□ 0.8
UPF3A-202ENST00000375299 MMP21Q8N119 569 aa20.05■□□□□ 0.8
UPF3A-202ENST00000375299 OR4M1Q8NGD0 313 aa20.05■□□□□ 0.8
UPF3A-202ENST00000375299 OR4D11Q8NGI4 311 aa20.05■□□□□ 0.8
UPF3A-202ENST00000375299 SLC7A13Q8TCU3 470 aa20.05■□□□□ 0.8
UPF3A-202ENST00000375299 LSM7Q9UK45 103 aaKnown RBP20.05■□□□□ 0.8
UPF3A-202ENST00000375299 ICKQ9UPZ9 632 aa20.05■□□□□ 0.8
UPF3A-202ENST00000375299 DYRK1BQ9Y463 629 aa20.05■□□□□ 0.8
UPF3A-202ENST00000375299 OBSL1O75147 1896 aa20.04■□□□□ 0.8
UPF3A-202ENST00000375299 TRAV19A0A0A6YYK7 116 aa20.04■□□□□ 0.8
UPF3A-202ENST00000375299 FAM240BA0A1B0GVZ2 78 aa20.04■□□□□ 0.8
UPF3A-202ENST00000375299 SLC5A10A0PJK1 596 aa20.04■□□□□ 0.8
UPF3A-202ENST00000375299 QSOX1O00391 747 aa20.04■□□□□ 0.8
UPF3A-202ENST00000375299 LYRM1O43325 122 aa20.04■□□□□ 0.8
UPF3A-202ENST00000375299 AKR7A2O43488 359 aa20.04■□□□□ 0.8
UPF3A-202ENST00000375299 CTSCP53634 463 aa20.04■□□□□ 0.8
UPF3A-202ENST00000375299 GAS1P54826 345 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms