RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 SHMT2P34897 504 aa7.8□□□□□ -1.16
UBR4-202ENST00000375224 MVDP53602 400 aa7.8□□□□□ -1.16
UBR4-202ENST00000375224 MANFP55145 182 aaKnown RBP7.8□□□□□ -1.16
UBR4-202ENST00000375224 SRP54P61011 504 aaKnown RBP7.8□□□□□ -1.16
UBR4-202ENST00000375224 CYP4F2P78329 520 aa7.8□□□□□ -1.16
UBR4-202ENST00000375224 KCNJ10P78508 379 aa7.8□□□□□ -1.16
UBR4-202ENST00000375224 VLDLRP98155 873 aa7.8□□□□□ -1.16
UBR4-202ENST00000375224 GRSF1Q12849 480 aaKnown RBP eCLIP7.8□□□□□ -1.16
UBR4-202ENST00000375224 HTR4Q13639 388 aa7.8□□□□□ -1.16
UBR4-202ENST00000375224 MLF2Q15773 248 aaPredicted RBP7.8□□□□□ -1.16
UBR4-202ENST00000375224 ZFP69Q49AA0 526 aa7.8□□□□□ -1.16
UBR4-202ENST00000375224 CRB2Q5IJ48 1285 aa7.8□□□□□ -1.16
UBR4-202ENST00000375224 PLEKHM3Q6ZWE6 761 aa7.8□□□□□ -1.16
UBR4-202ENST00000375224 IL17RCQ8NAC3 791 aa7.8□□□□□ -1.16
UBR4-202ENST00000375224 LINC01555Q8NAE3 123 aa7.8□□□□□ -1.16
UBR4-202ENST00000375224 SRFBP1Q8NEF9 429 aaKnown RBP7.8□□□□□ -1.16
UBR4-202ENST00000375224 ZBED6CLQ96FA7 236 aaPredicted RBP7.8□□□□□ -1.16
UBR4-202ENST00000375224 CCDC120Q96HB5 630 aa7.8□□□□□ -1.16
UBR4-202ENST00000375224 C7orf34Q96L11 122 aa7.8□□□□□ -1.16
UBR4-202ENST00000375224 USB1Q9BQ65 265 aaKnown RBP7.8□□□□□ -1.16
UBR4-202ENST00000375224 ZSCAN32Q9NX65 697 aa7.8□□□□□ -1.16
UBR4-202ENST00000375224 THUMPD1Q9NXG2 353 aaKnown RBP7.8□□□□□ -1.16
UBR4-202ENST00000375224 COQ3Q9NZJ6 369 aa7.8□□□□□ -1.16
UBR4-202ENST00000375224 PDP1Q9P0J1 537 aaPredicted RBP7.8□□□□□ -1.16
UBR4-202ENST00000375224 CORINQ9Y5Q5 1042 aa7.8□□□□□ -1.16
UBR4-202ENST00000375224 CMPK1P30085 196 aa7.8□□□□□ -1.16
UBR4-202ENST00000375224 AHRP35869 848 aa7.8□□□□□ -1.16
UBR4-202ENST00000375224 CD83Q01151 205 aa7.8□□□□□ -1.16
UBR4-202ENST00000375224 MPEG1Q2M385 716 aa7.8□□□□□ -1.16
UBR4-202ENST00000375224 C6orf132Q5T0Z8 1188 aa7.8□□□□□ -1.16
UBR4-202ENST00000375224 OR4C11Q6IEV9 310 aa7.8□□□□□ -1.16
UBR4-202ENST00000375224 ZNF704Q6ZNC4 412 aaPredicted RBP7.8□□□□□ -1.16
UBR4-202ENST00000375224 KCTD8Q6ZWB6 473 aa7.8□□□□□ -1.16
UBR4-202ENST00000375224 BTN2A1Q7KYR7 527 aa7.8□□□□□ -1.16
UBR4-202ENST00000375224 RNF130Q86XS8 419 aa7.8□□□□□ -1.16
UBR4-202ENST00000375224 OR2A1Q8NGT9 310 aa7.8□□□□□ -1.16
UBR4-202ENST00000375224 SPPL2AQ8TCT8 520 aa7.8□□□□□ -1.16
UBR4-202ENST00000375224 OR2M4Q96R27 311 aa7.8□□□□□ -1.16
UBR4-202ENST00000375224 KIR3DX1Q9H7L2 352 aa7.8□□□□□ -1.16
UBR4-202ENST00000375224 DDX31Q9H8H2 851 aaKnown RBP7.8□□□□□ -1.16
UBR4-202ENST00000375224 POLR1BQ9H9Y6 1135 aa7.8□□□□□ -1.16
UBR4-202ENST00000375224 ACSS1Q9NUB1 689 aaPredicted RBP7.8□□□□□ -1.16
UBR4-202ENST00000375224 MRPS7Q9Y2R9 242 aaKnown RBP7.8□□□□□ -1.16
UBR4-202ENST00000375224 UGT2A1Q9Y4X1 527 aa7.8□□□□□ -1.16
UBR4-202ENST00000375224 SNX8Q9Y5X2 465 aa7.8□□□□□ -1.16
UBR4-202ENST00000375224 SNX5Q9Y5X3 404 aa7.8□□□□□ -1.16
UBR4-202ENST00000375224 FEZF1A0PJY2 475 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 ANHXE9PGG2 379 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 ARHGEF9O43307 516 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 DNAJB5O75953 348 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 CLPXO76031 633 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 C1QCP02747 245 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 ZNF182P17025 639 aaPredicted RBP7.79□□□□□ -1.16
UBR4-202ENST00000375224 CRHBPP24387 322 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 PSMB5P28074 263 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 HTR1BP28222 390 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 ELK4P28324 431 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 AP2S1P53680 142 aaPredicted RBP7.79□□□□□ -1.16
UBR4-202ENST00000375224 PPP1R8Q12972 351 aaKnown RBP7.79□□□□□ -1.16
UBR4-202ENST00000375224 CLCA4Q14CN2 919 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 MLC1Q15049 377 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 RPE65Q16518 533 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 SLC5A12Q1EHB4 618 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 COX20Q5RI15 118 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 ARMC8Q8IUR7 673 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 GALNT12Q8IXK2 581 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 FBXL6Q8N531 539 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 ATG16L2Q8NAA4 619 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 CHDHQ8NE62 594 aaPredicted RBP7.79□□□□□ -1.16
UBR4-202ENST00000375224 OR52E1Q8NGJ3 308 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 NFKBIDQ8NI38 313 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 GEMIN6Q8WXD5 167 aaKnown RBP7.79□□□□□ -1.16
UBR4-202ENST00000375224 MAL2Q969L2 176 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 NEURL3Q96EH8 262 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 THSD1Q9NS62 852 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 KRT84Q9NSB2 600 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 GPATCH2Q9NW75 528 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 VNN3Q9NY84 501 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 TAS2R7Q9NYW3 318 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 MAT2BQ9NZL9 334 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 EHD3Q9NZN3 535 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 TMEM9Q9P0T7 183 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 ZNF451Q9Y4E5 1061 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 MAP4K5Q9Y4K4 846 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 A0A1W2PQF6 199 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 C5orf58C9J3I9 102 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 MEN1O00255 615 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 SLC31A1O15431 190 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 PDE9AO76083 593 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 APBB3O95704 486 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 CPNE6O95741 557 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 TBX6O95947 436 aaPredicted RBP7.79□□□□□ -1.16
UBR4-202ENST00000375224 EGFP01133 1207 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 FRKP42685 505 aaPredicted RBP7.79□□□□□ -1.16
UBR4-202ENST00000375224 SSR2P43308 183 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 TSFMP43897 325 aaKnown RBP7.79□□□□□ -1.16
UBR4-202ENST00000375224 ALDH9A1P49189 494 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 DAPP51397 102 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 CXCR4P61073 352 aa7.79□□□□□ -1.16
UBR4-202ENST00000375224 ISL1P61371 349 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms