RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 DNAAF2Q9NVR5 837 aaKnown RBP16.98■□□□□ 0.31
HLA-DQB1-201ENST00000374943 MS4A12Q9NXJ0 267 aa16.98■□□□□ 0.31
HLA-DQB1-201ENST00000374943 LYVE1Q9Y5Y7 322 aa16.98■□□□□ 0.31
HLA-DQB1-201ENST00000374943 ZNF780BQ9Y6R6 833 aa16.98■□□□□ 0.31
HLA-DQB1-201ENST00000374943 GON4LQ3T8J9 2241 aa16.98■□□□□ 0.31
HLA-DQB1-201ENST00000374943 LOC105369274A0A096LPK9 316 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 LOC102723532A0A0G2JNH3 316 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 B4DGG1 531 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 PVRP15151 417 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 XCR1P46094 333 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 FASLGP48023 281 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 KCNC4Q03721 635 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 ZNF691Q5VV52 312 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 DGLUCYQ7Z3D6 616 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 CCDC116Q8IYX3 515 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 OR4N4Q8N0Y3 316 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 OR4C15Q8NGM1 316 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 ZCCHC10Q8TBK6 192 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 RASSF5Q8WWW0 418 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 RAB8BQ92930 207 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 CLDN23Q96B33 292 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 RBM38Q9H0Z9 239 aaKnown RBP16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 SEMA6CQ9H3T2 930 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 LYRM4Q9HD34 91 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 DDX18Q9NVP1 670 aaKnown RBP16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 THEGQ9P2T0 379 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 DAPP1Q9UN19 280 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 A8MVJ9 347 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 TLR4O00206 839 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 EMC8O43402 210 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 UGT2B11O75310 529 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 MFN2O95140 757 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 RECKO95980 971 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 ALOX12P18054 663 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 MATN1P21941 496 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 CPN2P22792 545 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 RYKP34925 604 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 HLCSP50747 726 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 LIM2P55344 173 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 SNRPNP63162 240 aaKnown RBP16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 PRR5P85299 388 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 KEAP1Q14145 624 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 LAPTM4AQ15012 233 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 GPR19Q15760 415 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 RPS26P11Q5JNZ5 115 aaPredicted RBP16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 RBM48Q5RL73 367 aaKnown RBP16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 ZNF605Q86T29 641 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 GKN2Q86XP6 184 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 SIX5Q8N196 739 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 FBLIM1Q8WUP2 373 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 HDAC2Q92769 488 aaKnown RBP16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 ZNF607Q96SK3 696 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 KLHL25Q9H0H3 589 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 ING2Q9H160 280 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 EXD2Q9NVH0 621 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 ENPP4Q9Y6X5 453 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 SCN2AQ99250 2005 aa16.97■□□□□ 0.31
HLA-DQB1-201ENST00000374943 PRAMEF27A3QJZ7 478 aa16.96■□□□□ 0.31
HLA-DQB1-201ENST00000374943 E9PQ18 207 aa16.96■□□□□ 0.31
HLA-DQB1-201ENST00000374943 TNFRSF11BO00300 401 aa16.96■□□□□ 0.31
HLA-DQB1-201ENST00000374943 AXIN1O15169 862 aa16.96■□□□□ 0.31
HLA-DQB1-201ENST00000374943 MITFO75030 526 aaPredicted RBP16.96■□□□□ 0.31
HLA-DQB1-201ENST00000374943 OR12D1P0DN82 309 aa16.96■□□□□ 0.31
HLA-DQB1-201ENST00000374943 TNFRSF1BP20333 461 aa16.96■□□□□ 0.31
HLA-DQB1-201ENST00000374943 PPP2R1BP30154 601 aa16.96■□□□□ 0.31
HLA-DQB1-201ENST00000374943 FEN1P39748 380 aaKnown RBP16.96■□□□□ 0.31
HLA-DQB1-201ENST00000374943 CDH15P55291 814 aa16.96■□□□□ 0.31
HLA-DQB1-201ENST00000374943 RUNX2Q13950 521 aa16.96■□□□□ 0.31
HLA-DQB1-201ENST00000374943 ZNF750Q32MQ0 723 aa16.96■□□□□ 0.31
HLA-DQB1-201ENST00000374943 DEFB134Q4QY38 66 aa16.96■□□□□ 0.31
HLA-DQB1-201ENST00000374943 PRAMEF8Q5VWM4 474 aa16.96■□□□□ 0.31
HLA-DQB1-201ENST00000374943 PRAMEF7Q5VXH5 474 aa16.96■□□□□ 0.31
HLA-DQB1-201ENST00000374943 ARMC6Q6NXE6 501 aa16.96■□□□□ 0.31
HLA-DQB1-201ENST00000374943 LGI4Q8N135 537 aa16.96■□□□□ 0.31
HLA-DQB1-201ENST00000374943 SMYD1Q8NB12 490 aa16.96■□□□□ 0.31
HLA-DQB1-201ENST00000374943 PIP5K1AQ99755 562 aa16.96■□□□□ 0.31
HLA-DQB1-201ENST00000374943 PSD2Q9BQI7 771 aa16.96■□□□□ 0.31
HLA-DQB1-201ENST00000374943 YIPF3Q9GZM5 350 aa16.96■□□□□ 0.31
HLA-DQB1-201ENST00000374943 C3orf14Q9HBI5 128 aa16.96■□□□□ 0.31
HLA-DQB1-201ENST00000374943 BCL2L10Q9HD36 194 aa16.96■□□□□ 0.31
HLA-DQB1-201ENST00000374943 NTMQ9P121 344 aa16.96■□□□□ 0.31
HLA-DQB1-201ENST00000374943 KIF17Q9P2E2 1029 aa16.96■□□□□ 0.31
HLA-DQB1-201ENST00000374943 PCDHGA8Q9Y5G5 932 aa16.96■□□□□ 0.31
HLA-DQB1-201ENST00000374943 GPC6Q9Y625 555 aaPredicted RBP16.96■□□□□ 0.31
HLA-DQB1-201ENST00000374943 SLC22A7Q9Y694 548 aa16.96■□□□□ 0.31
HLA-DQB1-201ENST00000374943 HSPE1-MOB4S4R3N1 261 aa16.96■□□□□ 0.31
HLA-DQB1-201ENST00000374943 ABCA7Q8IZY2 2146 aa16.96■□□□□ 0.31
HLA-DQB1-201ENST00000374943 SPAG17Q6Q759 2223 aa16.95■□□□□ 0.3
HLA-DQB1-201ENST00000374943 LILRA5A6NI73 299 aa16.95■□□□□ 0.3
HLA-DQB1-201ENST00000374943 BCKDKO14874 412 aa16.95■□□□□ 0.3
HLA-DQB1-201ENST00000374943 ASNA1O43681 348 aa16.95■□□□□ 0.3
HLA-DQB1-201ENST00000374943 SLC28A2O43868 658 aa16.95■□□□□ 0.3
HLA-DQB1-201ENST00000374943 IFNW1P05000 195 aa16.95■□□□□ 0.3
HLA-DQB1-201ENST00000374943 C8orf89P0DMQ9 161 aa16.95■□□□□ 0.3
HLA-DQB1-201ENST00000374943 RHCEP18577 417 aa16.95■□□□□ 0.3
HLA-DQB1-201ENST00000374943 TLX1P31314 330 aaPredicted RBP16.95■□□□□ 0.3
HLA-DQB1-201ENST00000374943 OR1E2P47887 323 aa16.95■□□□□ 0.3
HLA-DQB1-201ENST00000374943 LIMS1P48059 325 aa16.95■□□□□ 0.3
HLA-DQB1-201ENST00000374943 PXNP49023 591 aaPredicted RBP16.95■□□□□ 0.3
HLA-DQB1-201ENST00000374943 HMGA2P52926 109 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms