RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 SPRED3Q2MJR0 410 aa10.61□□□□□ -0.71
HSPG2-202ENST00000374676 LINC00303Q3SY05 128 aa10.61□□□□□ -0.71
HSPG2-202ENST00000374676 NXNQ6DKJ4 435 aa10.61□□□□□ -0.71
HSPG2-202ENST00000374676 JMJD6Q6NYC1 403 aaPredicted RBP10.61□□□□□ -0.71
HSPG2-202ENST00000374676 GALNT16Q8N428 558 aa10.61□□□□□ -0.71
HSPG2-202ENST00000374676 NATD1Q8N6N6 113 aa10.61□□□□□ -0.71
HSPG2-202ENST00000374676 B3GNT7Q8NFL0 401 aa10.61□□□□□ -0.71
HSPG2-202ENST00000374676 CLHC1Q8NHS4 586 aa10.61□□□□□ -0.71
HSPG2-202ENST00000374676 ELP5Q8TE02 316 aa10.61□□□□□ -0.71
HSPG2-202ENST00000374676 TTC9Q92623 222 aa10.61□□□□□ -0.71
HSPG2-202ENST00000374676 EXTL1Q92935 676 aa10.61□□□□□ -0.71
HSPG2-202ENST00000374676 EXOSC8Q96B26 276 aaKnown RBP10.61□□□□□ -0.71
HSPG2-202ENST00000374676 PPWD1Q96BP3 646 aaKnown RBP10.61□□□□□ -0.71
HSPG2-202ENST00000374676 EBF4Q9BQW3 602 aa10.61□□□□□ -0.71
HSPG2-202ENST00000374676 BRINP2Q9C0B6 783 aa10.61□□□□□ -0.71
HSPG2-202ENST00000374676 LHPPQ9H008 270 aa10.61□□□□□ -0.71
HSPG2-202ENST00000374676 KCNK13Q9HB14 408 aa10.61□□□□□ -0.71
HSPG2-202ENST00000374676 TCF7L2Q9NQB0 619 aa10.61□□□□□ -0.71
HSPG2-202ENST00000374676 FGFR1OP2Q9NVK5 253 aa10.61□□□□□ -0.71
HSPG2-202ENST00000374676 GPR45Q9Y5Y3 372 aa10.61□□□□□ -0.71
HSPG2-202ENST00000374676 ATMQ13315 3056 aa10.6□□□□□ -0.71
HSPG2-202ENST00000374676 A0A1W2PS29 197 aa10.6□□□□□ -0.71
HSPG2-202ENST00000374676 MASP2O00187 686 aa10.6□□□□□ -0.71
HSPG2-202ENST00000374676 ANKRD28O15084 1053 aa10.6□□□□□ -0.71
HSPG2-202ENST00000374676 SCAMP2O15127 329 aaKnown RBP10.6□□□□□ -0.71
HSPG2-202ENST00000374676 UBDO15205 165 aa10.6□□□□□ -0.71
HSPG2-202ENST00000374676 AKAP10O43572 662 aa10.6□□□□□ -0.71
HSPG2-202ENST00000374676 OR10H2O60403 315 aa10.6□□□□□ -0.71
HSPG2-202ENST00000374676 LRATO95237 230 aa10.6□□□□□ -0.71
HSPG2-202ENST00000374676 TROVE2P10155 538 aaKnown RBP eCLIP10.6□□□□□ -0.71
HSPG2-202ENST00000374676 IDO1P14902 403 aa10.6□□□□□ -0.71
HSPG2-202ENST00000374676 MPIP34949 423 aa10.6□□□□□ -0.71
HSPG2-202ENST00000374676 HPCAL1P37235 193 aa10.6□□□□□ -0.71
HSPG2-202ENST00000374676 MRPL19P49406 292 aaKnown RBP10.6□□□□□ -0.71
HSPG2-202ENST00000374676 CCL11P51671 97 aa10.6□□□□□ -0.71
HSPG2-202ENST00000374676 IRX1P78414 480 aaPredicted RBP10.6□□□□□ -0.71
HSPG2-202ENST00000374676 MAP4K2Q12851 820 aa10.6□□□□□ -0.71
HSPG2-202ENST00000374676 CHAF1BQ13112 559 aa10.6□□□□□ -0.71
HSPG2-202ENST00000374676 GSTA3Q16772 222 aa10.6□□□□□ -0.71
HSPG2-202ENST00000374676 BTBD16Q32M84 506 aa10.6□□□□□ -0.71
HSPG2-202ENST00000374676 ZNF750Q32MQ0 723 aa10.6□□□□□ -0.71
HSPG2-202ENST00000374676 CPTPQ5TA50 214 aa10.6□□□□□ -0.71
HSPG2-202ENST00000374676 H3F3CQ6NXT2 135 aa10.6□□□□□ -0.71
HSPG2-202ENST00000374676 DGAT2L6Q6ZPD8 337 aa10.6□□□□□ -0.71
HSPG2-202ENST00000374676 CCDC116Q8IYX3 515 aa10.6□□□□□ -0.71
HSPG2-202ENST00000374676 LRRC25Q8N386 305 aaPredicted RBP10.6□□□□□ -0.71
HSPG2-202ENST00000374676 APCDD1LQ8NCL9 501 aa10.6□□□□□ -0.71
HSPG2-202ENST00000374676 OR1N1Q8NGS0 311 aa10.6□□□□□ -0.71
HSPG2-202ENST00000374676 ZNF675Q8TD23 568 aa10.6□□□□□ -0.71
HSPG2-202ENST00000374676 PSMF1Q92530 271 aa10.6□□□□□ -0.71
HSPG2-202ENST00000374676 RIT1Q92963 219 aa10.6□□□□□ -0.71
HSPG2-202ENST00000374676 GFM2Q969S9 779 aaKnown RBP10.6□□□□□ -0.71
HSPG2-202ENST00000374676 PPCDCQ96CD2 204 aa10.6□□□□□ -0.71
HSPG2-202ENST00000374676 COQ8BQ96D53 544 aa10.6□□□□□ -0.71
HSPG2-202ENST00000374676 CHMP6Q96FZ7 201 aa10.6□□□□□ -0.71
HSPG2-202ENST00000374676 WBP1Q96G27 269 aa10.6□□□□□ -0.71
HSPG2-202ENST00000374676 VMP1Q96GC9 406 aa10.6□□□□□ -0.71
HSPG2-202ENST00000374676 SENP5Q96HI0 755 aaPredicted RBP10.6□□□□□ -0.71
HSPG2-202ENST00000374676 ART5Q96L15 291 aa10.6□□□□□ -0.71
HSPG2-202ENST00000374676 BBS4Q96RK4 519 aa10.6□□□□□ -0.71
HSPG2-202ENST00000374676 PRPF18Q99633 342 aaKnown RBP10.6□□□□□ -0.71
HSPG2-202ENST00000374676 DPY30Q9C005 99 aa10.6□□□□□ -0.71
HSPG2-202ENST00000374676 SEMA4CQ9C0C4 833 aa10.6□□□□□ -0.71
HSPG2-202ENST00000374676 CXorf21Q9HAI6 301 aa10.6□□□□□ -0.71
HSPG2-202ENST00000374676 NPHS2Q9NP85 383 aa10.6□□□□□ -0.71
HSPG2-202ENST00000374676 SH3BP4Q9P0V3 963 aa10.6□□□□□ -0.71
HSPG2-202ENST00000374676 ENTPD4Q9Y227 616 aa10.6□□□□□ -0.71
HSPG2-202ENST00000374676 PCDHGA9Q9Y5G4 932 aaKnown RBP10.6□□□□□ -0.71
HSPG2-202ENST00000374676 PRRC2CQ9Y520 2896 aaKnown RBP10.6□□□□□ -0.71
HSPG2-202ENST00000374676 DNAJB5O75953 348 aa10.59□□□□□ -0.71
HSPG2-202ENST00000374676 SLITRK5O94991 958 aa10.59□□□□□ -0.71
HSPG2-202ENST00000374676 IGKV3-11P04433 115 aa10.59□□□□□ -0.71
HSPG2-202ENST00000374676 IFI6P09912 130 aa10.59□□□□□ -0.71
HSPG2-202ENST00000374676 LAMP1P11279 417 aa10.59□□□□□ -0.71
HSPG2-202ENST00000374676 S1PR1P21453 382 aa10.59□□□□□ -0.71
HSPG2-202ENST00000374676 ITGA3P26006 1051 aa10.59□□□□□ -0.71
HSPG2-202ENST00000374676 FRKP42685 505 aaPredicted RBP10.59□□□□□ -0.71
HSPG2-202ENST00000374676 CLCN2P51788 898 aa10.59□□□□□ -0.71
HSPG2-202ENST00000374676 CLNS1AP54105 237 aaKnown RBP10.59□□□□□ -0.71
HSPG2-202ENST00000374676 GYS2P54840 703 aa10.59□□□□□ -0.71
HSPG2-202ENST00000374676 SRSF11Q05519 484 aaKnown RBP10.59□□□□□ -0.71
HSPG2-202ENST00000374676 DUSP2Q05923 314 aa10.59□□□□□ -0.71
HSPG2-202ENST00000374676 MGAT2Q10469 447 aa10.59□□□□□ -0.71
HSPG2-202ENST00000374676 FUT7Q11130 342 aa10.59□□□□□ -0.71
HSPG2-202ENST00000374676 ZNF267Q14586 743 aaPredicted RBP10.59□□□□□ -0.71
HSPG2-202ENST00000374676 MYBPC3Q14896 1274 aa10.59□□□□□ -0.71
HSPG2-202ENST00000374676 RPS6KA2Q15349 733 aa10.59□□□□□ -0.71
HSPG2-202ENST00000374676 PRICKLE4Q2TBC4 344 aa10.59□□□□□ -0.71
HSPG2-202ENST00000374676 PDCD4Q53EL6 469 aaKnown RBP10.59□□□□□ -0.71
HSPG2-202ENST00000374676 ZNF385BQ569K4 471 aa10.59□□□□□ -0.71
HSPG2-202ENST00000374676 IRAK1BP1Q5VVH5 260 aa10.59□□□□□ -0.71
HSPG2-202ENST00000374676 TMEM198Q66K66 360 aa10.59□□□□□ -0.71
HSPG2-202ENST00000374676 CGB2Q6NT52 195 aa10.59□□□□□ -0.71
HSPG2-202ENST00000374676 CAMKMTQ7Z624 323 aa10.59□□□□□ -0.71
HSPG2-202ENST00000374676 GALNT12Q8IXK2 581 aa10.59□□□□□ -0.71
HSPG2-202ENST00000374676 KRTCAP2Q8N6L1 136 aa10.59□□□□□ -0.71
HSPG2-202ENST00000374676 OR7A2PQ8NGA2 310 aa10.59□□□□□ -0.71
HSPG2-202ENST00000374676 OR8K3Q8NH51 312 aa10.59□□□□□ -0.71
HSPG2-202ENST00000374676 RFWD2Q8NHY2 731 aa10.59□□□□□ -0.71
HSPG2-202ENST00000374676 SUN3Q8TAQ9 357 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms