RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 NTRK2Q16620 822 aa12.66□□□□□ -0.38
CXCL12-202ENST00000374426 SPRED3Q2MJR0 410 aa12.66□□□□□ -0.38
CXCL12-202ENST00000374426 FBXL19-AS1Q494R0 122 aa12.66□□□□□ -0.38
CXCL12-202ENST00000374426 ACSF3Q4G176 576 aaPredicted RBP12.66□□□□□ -0.38
CXCL12-202ENST00000374426 SLC29A4Q7RTT9 530 aa12.66□□□□□ -0.38
CXCL12-202ENST00000374426 GPR180Q86V85 440 aa12.66□□□□□ -0.38
CXCL12-202ENST00000374426 DND1Q8IYX4 353 aaKnown RBP12.66□□□□□ -0.38
CXCL12-202ENST00000374426 ST13P4Q8IZP2 240 aaPredicted RBP12.66□□□□□ -0.38
CXCL12-202ENST00000374426 ZCCHC7Q8N3Z6 543 aaKnown RBP12.66□□□□□ -0.38
CXCL12-202ENST00000374426 LIX1Q8N485 282 aa12.66□□□□□ -0.38
CXCL12-202ENST00000374426 FAM222BQ8WU58 562 aa12.66□□□□□ -0.38
CXCL12-202ENST00000374426 RNASE6Q93091 150 aaKnown RBP12.66□□□□□ -0.38
CXCL12-202ENST00000374426 ALPK1Q96QP1 1244 aa12.66□□□□□ -0.38
CXCL12-202ENST00000374426 RBBP8Q99708 897 aa12.66□□□□□ -0.38
CXCL12-202ENST00000374426 CPNE1Q99829 537 aa12.66□□□□□ -0.38
CXCL12-202ENST00000374426 DOHHQ9BU89 302 aa12.66□□□□□ -0.38
CXCL12-202ENST00000374426 ERVK-6Q9BXR3 956 aa12.66□□□□□ -0.38
CXCL12-202ENST00000374426 GSX1Q9H4S2 264 aaPredicted RBP12.66□□□□□ -0.38
CXCL12-202ENST00000374426 ALG9Q9H6U8 611 aa12.66□□□□□ -0.38
CXCL12-202ENST00000374426 PRM3Q9NNZ6 103 aa12.66□□□□□ -0.38
CXCL12-202ENST00000374426 DMRT3Q9NQL9 472 aa12.66□□□□□ -0.38
CXCL12-202ENST00000374426 ERVK-19Q9WJR5 959 aa12.66□□□□□ -0.38
CXCL12-202ENST00000374426 SNX24Q9Y343 169 aa12.66□□□□□ -0.38
CXCL12-202ENST00000374426 JMJD1CQ15652 2540 aa12.65□□□□□ -0.38
CXCL12-202ENST00000374426 C15orf38-AP3S2A0A0A6YYH1 394 aa12.65□□□□□ -0.38
CXCL12-202ENST00000374426 IQANK1A0A1B0GTG1 560 aa12.65□□□□□ -0.38
CXCL12-202ENST00000374426 TCRBV9S1A1TA0A576 114 aa12.65□□□□□ -0.38
CXCL12-202ENST00000374426 AHRRA9YTQ3 701 aa12.65□□□□□ -0.38
CXCL12-202ENST00000374426 EPPINO95925 133 aa12.65□□□□□ -0.38
CXCL12-202ENST00000374426 C1QAP02745 245 aa12.65□□□□□ -0.38
CXCL12-202ENST00000374426 CLPSP04118 112 aa12.65□□□□□ -0.38
CXCL12-202ENST00000374426 GDF1P27539 372 aa12.65□□□□□ -0.38
CXCL12-202ENST00000374426 TIMP3P35625 211 aa12.65□□□□□ -0.38
CXCL12-202ENST00000374426 RAB10P61026 200 aa12.65□□□□□ -0.38
CXCL12-202ENST00000374426 CRYZQ08257 329 aaKnown RBP12.65□□□□□ -0.38
CXCL12-202ENST00000374426 DLG1Q12959 904 aa12.65□□□□□ -0.38
CXCL12-202ENST00000374426 DDX39BQ13838 428 aaKnown RBP12.65□□□□□ -0.38
CXCL12-202ENST00000374426 ZNF267Q14586 743 aaPredicted RBP12.65□□□□□ -0.38
CXCL12-202ENST00000374426 GRHL2Q6ISB3 625 aa12.65□□□□□ -0.38
CXCL12-202ENST00000374426 TMEM64Q6YI46 380 aa12.65□□□□□ -0.38
CXCL12-202ENST00000374426 RNF111Q6ZNA4 994 aa12.65□□□□□ -0.38
CXCL12-202ENST00000374426 ISCA2Q86U28 154 aa12.65□□□□□ -0.38
CXCL12-202ENST00000374426 MMP21Q8N119 569 aa12.65□□□□□ -0.38
CXCL12-202ENST00000374426 GOT1L1Q8NHS2 421 aaPredicted RBP12.65□□□□□ -0.38
CXCL12-202ENST00000374426 HUS1BQ8NHY5 278 aa12.65□□□□□ -0.38
CXCL12-202ENST00000374426 STAG3L4Q8TBR4 150 aa12.65□□□□□ -0.38
CXCL12-202ENST00000374426 PYROXD1Q8WU10 500 aa12.65□□□□□ -0.38
CXCL12-202ENST00000374426 UBTD2Q8WUN7 234 aa12.65□□□□□ -0.38
CXCL12-202ENST00000374426 RGMAQ96B86 450 aa12.65□□□□□ -0.38
CXCL12-202ENST00000374426 ATOH8Q96SQ7 321 aa12.65□□□□□ -0.38
CXCL12-202ENST00000374426 MTERF1Q99551 399 aaKnown RBP12.65□□□□□ -0.38
CXCL12-202ENST00000374426 TIMP4Q99727 224 aa12.65□□□□□ -0.38
CXCL12-202ENST00000374426 ZNF717Q9BY31 904 aaPredicted RBP12.65□□□□□ -0.38
CXCL12-202ENST00000374426 NUDT4Q9NZJ9 180 aa12.65□□□□□ -0.38
CXCL12-202ENST00000374426 TXNDC16Q9P2K2 825 aa12.65□□□□□ -0.38
CXCL12-202ENST00000374426 OPTCQ9UBM4 332 aa12.65□□□□□ -0.38
CXCL12-202ENST00000374426 ZNF629Q9UEG4 869 aaPredicted RBP12.65□□□□□ -0.38
CXCL12-202ENST00000374426 PHF11Q9UIL8 331 aa12.65□□□□□ -0.38
CXCL12-202ENST00000374426 RPH3AQ9Y2J0 694 aaPredicted RBP12.65□□□□□ -0.38
CXCL12-202ENST00000374426 MED12Q93074 2177 aa12.64□□□□□ -0.39
CXCL12-202ENST00000374426 ANKRD33BA6NCL7 494 aa12.64□□□□□ -0.39
CXCL12-202ENST00000374426 GLOD5A6NK44 160 aa12.64□□□□□ -0.39
CXCL12-202ENST00000374426 FAM159BA6NKW6 160 aa12.64□□□□□ -0.39
CXCL12-202ENST00000374426 OR6C76A6NM76 312 aa12.64□□□□□ -0.39
CXCL12-202ENST00000374426 K7EPI3 171 aa12.64□□□□□ -0.39
CXCL12-202ENST00000374426 UBXN8O00124 270 aa12.64□□□□□ -0.39
CXCL12-202ENST00000374426 ZSCAN12O43309 604 aa12.64□□□□□ -0.39
CXCL12-202ENST00000374426 OR10H2O60403 315 aa12.64□□□□□ -0.39
CXCL12-202ENST00000374426 GPR75O95800 540 aa12.64□□□□□ -0.39
CXCL12-202ENST00000374426 SLC35E2BP0CK96 405 aa12.64□□□□□ -0.39
CXCL12-202ENST00000374426 TLX1P31314 330 aaPredicted RBP12.64□□□□□ -0.39
CXCL12-202ENST00000374426 GP5P40197 560 aa12.64□□□□□ -0.39
CXCL12-202ENST00000374426 PIK3CBP42338 1070 aa12.64□□□□□ -0.39
CXCL12-202ENST00000374426 RAP1GDS1P52306 607 aa12.64□□□□□ -0.39
CXCL12-202ENST00000374426 ZNF136P52737 540 aa12.64□□□□□ -0.39
CXCL12-202ENST00000374426 DGKQP52824 942 aa12.64□□□□□ -0.39
CXCL12-202ENST00000374426 ADAM8P78325 824 aa12.64□□□□□ -0.39
CXCL12-202ENST00000374426 DAZAP2Q15038 168 aaPredicted RBP12.64□□□□□ -0.39
CXCL12-202ENST00000374426 FNDC7Q5VTL7 733 aa12.64□□□□□ -0.39
CXCL12-202ENST00000374426 BICRALQ6AI39 1079 aa12.64□□□□□ -0.39
CXCL12-202ENST00000374426 MRM1Q6IN84 353 aaKnown RBP12.64□□□□□ -0.39
CXCL12-202ENST00000374426 PAMR1Q6UXH9 720 aa12.64□□□□□ -0.39
CXCL12-202ENST00000374426 MAATS1Q7Z4T9 603 aa12.64□□□□□ -0.39
CXCL12-202ENST00000374426 LACC1Q8IV20 430 aa12.64□□□□□ -0.39
CXCL12-202ENST00000374426 ZNF441Q8N8Z8 693 aa12.64□□□□□ -0.39
CXCL12-202ENST00000374426 CDKL2Q92772 493 aa12.64□□□□□ -0.39
CXCL12-202ENST00000374426 DIO2Q92813 273 aa12.64□□□□□ -0.39
CXCL12-202ENST00000374426 RIT1Q92963 219 aa12.64□□□□□ -0.39
CXCL12-202ENST00000374426 MBD6Q96DN6 1003 aa12.64□□□□□ -0.39
CXCL12-202ENST00000374426 ZNF597Q96LX8 424 aa12.64□□□□□ -0.39
CXCL12-202ENST00000374426 PELOQ9BRX2 385 aaKnown RBP12.64□□□□□ -0.39
CXCL12-202ENST00000374426 UBQLN3Q9H347 655 aa12.64□□□□□ -0.39
CXCL12-202ENST00000374426 RYDENQ9NUL5 291 aaKnown RBP12.64□□□□□ -0.39
CXCL12-202ENST00000374426 MTRF1LQ9UGC7 380 aaKnown RBP12.64□□□□□ -0.39
CXCL12-202ENST00000374426 ADGRE2Q9UHX3 823 aa12.64□□□□□ -0.39
CXCL12-202ENST00000374426 EDARQ9UNE0 448 aa12.64□□□□□ -0.39
CXCL12-202ENST00000374426 ASB4Q9Y574 426 aa12.64□□□□□ -0.39
CXCL12-202ENST00000374426 A0A0A6YYD5 115 aa12.63□□□□□ -0.39
CXCL12-202ENST00000374426 A0A1W2PR48 441 aa12.63□□□□□ -0.39
CXCL12-202ENST00000374426 SUPT3HB4E1H0 165 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms